RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 OLR1P78380 273 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 PPATQ06203 517 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 SCRN3Q0VDG4 424 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 MSLNQ13421 630 aaPredicted RBP10.45□□□□□ -0.74
CD28-202ENST00000374481 TRIQKQ629K1 86 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 SNRNP48Q6IEG0 339 aaKnown RBP10.45□□□□□ -0.74
CD28-202ENST00000374481 ADGRD1Q6QNK2 874 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 UGT2A3Q6UWM9 527 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 PID1Q7Z2X4 250 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 NLRX1Q86UT6 975 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 PNPT1Q8TCS8 783 aaKnown RBP10.45□□□□□ -0.74
CD28-202ENST00000374481 EBF4Q9BQW3 602 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 HGH1Q9BTY7 390 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 RAPGEFL1Q9UHV5 662 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 PNMA8BQ9ULN7 279 aaPredicted RBP10.45□□□□□ -0.74
CD28-202ENST00000374481 AGLP35573 1532 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 EFCAB10A6NFE3 127 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 DENRO43583 198 aaKnown RBP10.45□□□□□ -0.74
CD28-202ENST00000374481 LIASO43766 372 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 TOMM70O94826 608 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 PSAPP07602 524 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 TAB1Q15750 504 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 FAM102AQ5T9C2 384 aaPredicted RBP10.45□□□□□ -0.74
CD28-202ENST00000374481 EFL1Q7Z2Z2 1120 aaKnown RBP10.45□□□□□ -0.74
CD28-202ENST00000374481 SYNE4Q8N205 404 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 STX19Q8N4C7 294 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 BANPQ8N9N5 519 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 NSUN6Q8TEA1 469 aaKnown RBP10.45□□□□□ -0.74
CD28-202ENST00000374481 YME1L1Q96TA2 773 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 SPON1Q9HCB6 807 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 FKBP14Q9NWM8 211 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 ING3Q9NXR8 418 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 MRPL39Q9NYK5 338 aaKnown RBP10.45□□□□□ -0.74
CD28-202ENST00000374481 ANAPC2Q9UJX6 822 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 IGSF9BQ9UPX0 1349 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 TCRBV9S1A1TA0A576 114 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 I3L521 148 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 CYB561D2O14569 222 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 AURKAO14965 403 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 HS6ST1O60243 411 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 TFAP2AP05549 437 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 EPHA3P29320 983 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 OR2B6P58173 313 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 EPS8Q12929 822 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 SUZ12Q15022 739 aaKnown RBP10.45□□□□□ -0.74
CD28-202ENST00000374481 SNRNP35Q16560 246 aaKnown RBP10.45□□□□□ -0.74
CD28-202ENST00000374481 DCAF6Q58WW2 860 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 AARS2Q5JTZ9 985 aaKnown RBP10.45□□□□□ -0.74
CD28-202ENST00000374481 FRMD7Q6ZUT3 714 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 KCNK18Q7Z418 384 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 MCOLN2Q8IZK6 566 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 SETD9Q8NE22 299 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 LILRB4Q8NHJ6 448 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 KCTD14Q9BQ13 255 aaPredicted RBP10.45□□□□□ -0.74
CD28-202ENST00000374481 TMEM246Q9BRR3 403 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 PI4K2AQ9BTU6 479 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 PIF1Q9H611 641 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 CCDC177Q9NQR7 707 aaPredicted RBP10.45□□□□□ -0.74
CD28-202ENST00000374481 ZNF277Q9NRM2 450 aaPredicted RBP10.45□□□□□ -0.74
CD28-202ENST00000374481 NCKIPSDQ9NZQ3 722 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 EMC3Q9P0I2 261 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 EBF1Q9UH73 591 aa10.45□□□□□ -0.74
CD28-202ENST00000374481 CPS1P31327 1500 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 PIGNO95427 931 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 ASNSP08243 561 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 FAM86B2P0C5J1 330 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 SPATA31D3P0C874 917 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 CKMT2P17540 419 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 SDC4P31431 198 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 RECQLP46063 649 aaPredicted RBP10.44□□□□□ -0.74
CD28-202ENST00000374481 RPL14P50914 215 aaKnown RBP10.44□□□□□ -0.74
CD28-202ENST00000374481 PRKD1Q15139 912 aaPredicted RBP10.44□□□□□ -0.74
CD28-202ENST00000374481 PON2Q15165 354 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 QPRTQ15274 297 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 CA9Q16790 459 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 CLEC16AQ2KHT3 1053 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 FAM83EQ2M2I3 478 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 FAM98BQ52LJ0 330 aaKnown RBP10.44□□□□□ -0.74
CD28-202ENST00000374481 DENND1BQ6P3S1 775 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 SPATA31D4Q6ZUB0 917 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 PGAM4Q8N0Y7 254 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 OR7G1Q8NGA0 311 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 PPP1R10Q96QC0 940 aaKnown RBP10.44□□□□□ -0.74
CD28-202ENST00000374481 KCNMB3Q9NPA1 279 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 WDR70Q9NW82 654 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 DPP3Q9NY33 737 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 MYH8P13535 1937 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 ROBO2Q9HCK4 1378 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 DENND3A2RUS2 1198 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 E5RI56 91 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 TRDMT1O14717 391 aaKnown RBP10.44□□□□□ -0.74
CD28-202ENST00000374481 HDAC3O15379 428 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 YES1P07947 543 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 PAMP19021 973 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 SLC26A3P40879 764 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 PRELPP51888 382 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 UGP2Q16851 508 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 ZC3H12BQ5HYM0 836 aaKnown RBP10.44□□□□□ -0.74
CD28-202ENST00000374481 CCNYL2Q5T2Q4 361 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 PRR23BQ6ZRT6 265 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms