RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 RMDN1Q96DB5 314 aa13.52□□□□□ -0.24
NCDN-203ENST00000373253 RSRC1Q96IZ7 334 aaKnown RBP13.52□□□□□ -0.24
NCDN-203ENST00000373253 SMOQ99835 787 aa13.52□□□□□ -0.24
NCDN-203ENST00000373253 KDM4CQ9H3R0 1056 aa13.52□□□□□ -0.24
NCDN-203ENST00000373253 USP29Q9HBJ7 922 aa13.52□□□□□ -0.24
NCDN-203ENST00000373253 RXFP1Q9HBX9 757 aa13.52□□□□□ -0.24
NCDN-203ENST00000373253 TRPC7Q9HCX4 862 aa13.52□□□□□ -0.24
NCDN-203ENST00000373253 SLC12A8A0AV02 714 aa13.52□□□□□ -0.25
NCDN-203ENST00000373253 CIB2O75838 187 aa13.52□□□□□ -0.25
NCDN-203ENST00000373253 GABBR2O75899 941 aa13.52□□□□□ -0.25
NCDN-203ENST00000373253 ASMTLO95671 621 aa13.52□□□□□ -0.25
NCDN-203ENST00000373253 PRAMEP78395 509 aa13.52□□□□□ -0.25
NCDN-203ENST00000373253 NCBP2-AS2Q69YL0 99 aa13.52□□□□□ -0.25
NCDN-203ENST00000373253 ARHGAP36Q6ZRI8 547 aa13.52□□□□□ -0.25
NCDN-203ENST00000373253 MARK4Q96L34 752 aa13.52□□□□□ -0.25
NCDN-203ENST00000373253 CYP2S1Q96SQ9 504 aa13.52□□□□□ -0.25
NCDN-203ENST00000373253 APOBEC2Q9Y235 224 aaKnown RBP13.52□□□□□ -0.25
NCDN-203ENST00000373253 ZNFX1Q9P2E3 1918 aaKnown RBP13.52□□□□□ -0.25
NCDN-203ENST00000373253 USP4Q13107 963 aa13.52□□□□□ -0.25
NCDN-203ENST00000373253 ITGA7Q13683 1181 aa13.52□□□□□ -0.25
NCDN-203ENST00000373253 PDCD2Q16342 344 aaPredicted RBP13.52□□□□□ -0.25
NCDN-203ENST00000373253 PDK4Q16654 411 aa13.52□□□□□ -0.25
NCDN-203ENST00000373253 SPDYCQ5MJ68 293 aa13.52□□□□□ -0.25
NCDN-203ENST00000373253 RNF180Q86T96 592 aa13.52□□□□□ -0.25
NCDN-203ENST00000373253 TAC4Q86UU9 113 aa13.52□□□□□ -0.25
NCDN-203ENST00000373253 FBXO32Q969P5 355 aa13.52□□□□□ -0.25
NCDN-203ENST00000373253 APOPT1Q96IL0 206 aa13.52□□□□□ -0.25
NCDN-203ENST00000373253 ELMO2Q96JJ3 720 aa13.52□□□□□ -0.25
NCDN-203ENST00000373253 NDNQ99608 321 aa13.52□□□□□ -0.25
NCDN-203ENST00000373253 DMAP1Q9NPF5 467 aaPredicted RBP13.52□□□□□ -0.25
NCDN-203ENST00000373253 HCSTQ9UBK5 93 aa13.52□□□□□ -0.25
NCDN-203ENST00000373253 A8MX80 341 aa13.51□□□□□ -0.25
NCDN-203ENST00000373253 CHADO15335 359 aa13.51□□□□□ -0.25
NCDN-203ENST00000373253 FSBPO95073 299 aa13.51□□□□□ -0.25
NCDN-203ENST00000373253 ASPHQ12797 758 aa13.51□□□□□ -0.25
NCDN-203ENST00000373253 TAF11Q15544 211 aa13.51□□□□□ -0.25
NCDN-203ENST00000373253 URGCPQ8TCY9 931 aa13.51□□□□□ -0.25
NCDN-203ENST00000373253 PMLP29590 882 aa13.51□□□□□ -0.25
NCDN-203ENST00000373253 MSX2P35548 267 aaPredicted RBP13.51□□□□□ -0.25
NCDN-203ENST00000373253 PGM1P36871 562 aa13.51□□□□□ -0.25
NCDN-203ENST00000373253 AGMOQ6ZNB7 445 aa13.51□□□□□ -0.25
NCDN-203ENST00000373253 CAND1Q86VP6 1230 aaKnown RBP13.51□□□□□ -0.25
NCDN-203ENST00000373253 ZNF280BQ86YH2 543 aa13.51□□□□□ -0.25
NCDN-203ENST00000373253 AGAP11Q8TF27 550 aa13.51□□□□□ -0.25
NCDN-203ENST00000373253 PRR11Q96HE9 360 aaPredicted RBP13.51□□□□□ -0.25
NCDN-203ENST00000373253 FCRL2Q96LA5 508 aaPredicted RBP13.51□□□□□ -0.25
NCDN-203ENST00000373253 MORF4L1Q9UBU8 362 aa13.51□□□□□ -0.25
NCDN-203ENST00000373253 CHKBQ9Y259 395 aa13.51□□□□□ -0.25
NCDN-203ENST00000373253 COL1A2P08123 1366 aa13.51□□□□□ -0.25
NCDN-203ENST00000373253 EDF1O60869 148 aaKnown RBP13.51□□□□□ -0.25
NCDN-203ENST00000373253 MX2P20592 715 aa13.51□□□□□ -0.25
NCDN-203ENST00000373253 CALRP27797 417 aaKnown RBP13.51□□□□□ -0.25
NCDN-203ENST00000373253 RASA2Q15283 850 aa13.51□□□□□ -0.25
NCDN-203ENST00000373253 PSMD5Q16401 504 aa13.51□□□□□ -0.25
NCDN-203ENST00000373253 RAP1GAP2Q684P5 730 aa13.51□□□□□ -0.25
NCDN-203ENST00000373253 GRAMD1AQ96CP6 724 aa13.51□□□□□ -0.25
NCDN-203ENST00000373253 TCRBV5S1A1TA0A578 114 aa13.5□□□□□ -0.25
NCDN-203ENST00000373253 PIRO00625 290 aa13.5□□□□□ -0.25
NCDN-203ENST00000373253 FCHO1O14526 889 aa13.5□□□□□ -0.25
NCDN-203ENST00000373253 CHRNA1P02708 482 aa13.5□□□□□ -0.25
NCDN-203ENST00000373253 SPATA31D3P0C874 917 aa13.5□□□□□ -0.25
NCDN-203ENST00000373253 CASP2P42575 452 aa13.5□□□□□ -0.25
NCDN-203ENST00000373253 NSUN2Q08J23 767 aaKnown RBP eCLIP13.5□□□□□ -0.25
NCDN-203ENST00000373253 UBAP2LQ14157 1087 aaKnown RBP13.5□□□□□ -0.25
NCDN-203ENST00000373253 CNGA3Q16281 694 aa13.5□□□□□ -0.25
NCDN-203ENST00000373253 SWT1Q5T5J6 900 aaKnown RBP13.5□□□□□ -0.25
NCDN-203ENST00000373253 SPATA31D4Q6ZUB0 917 aa13.5□□□□□ -0.25
NCDN-203ENST00000373253 PIGWQ7Z7B1 504 aa13.5□□□□□ -0.25
NCDN-203ENST00000373253 CD99L2Q8TCZ2 262 aa13.5□□□□□ -0.25
NCDN-203ENST00000373253 SLC44A1Q8WWI5 657 aa13.5□□□□□ -0.25
NCDN-203ENST00000373253 PHF21BQ96EK2 531 aa13.5□□□□□ -0.25
NCDN-203ENST00000373253 CLPTM1LQ96KA5 538 aa13.5□□□□□ -0.25
NCDN-203ENST00000373253 ZNF778Q96MU6 729 aa13.5□□□□□ -0.25
NCDN-203ENST00000373253 SUDS3Q9H7L9 328 aaPredicted RBP13.5□□□□□ -0.25
NCDN-203ENST00000373253 CRYL1Q9Y2S2 319 aa13.5□□□□□ -0.25
NCDN-203ENST00000373253 AIM2O14862 343 aa13.5□□□□□ -0.25
NCDN-203ENST00000373253 ATP6V1G2O95670 118 aa13.5□□□□□ -0.25
NCDN-203ENST00000373253 AXLP30530 894 aa13.5□□□□□ -0.25
NCDN-203ENST00000373253 NME5P56597 212 aa13.5□□□□□ -0.25
NCDN-203ENST00000373253 SATB1Q01826 763 aa13.5□□□□□ -0.25
NCDN-203ENST00000373253 ACCSLQ4AC99 568 aa13.5□□□□□ -0.25
NCDN-203ENST00000373253 C1orf146Q5VVC0 180 aa13.5□□□□□ -0.25
NCDN-203ENST00000373253 DQX1Q8TE96 717 aaKnown RBP13.5□□□□□ -0.25
NCDN-203ENST00000373253 NAT14Q8WUY8 206 aa13.5□□□□□ -0.25
NCDN-203ENST00000373253 DCAKDQ8WVC6 231 aa13.5□□□□□ -0.25
NCDN-203ENST00000373253 ALKBH8Q96BT7 664 aaKnown RBP13.5□□□□□ -0.25
NCDN-203ENST00000373253 TMEM109Q9BVC6 243 aa13.5□□□□□ -0.25
NCDN-203ENST00000373253 A0A096LPK6 155 aa13.5□□□□□ -0.25
NCDN-203ENST00000373253 A0A1W2PQH9 124 aa13.5□□□□□ -0.25
NCDN-203ENST00000373253 DUSP11O75319 330 aaKnown RBP13.5□□□□□ -0.25
NCDN-203ENST00000373253 PAGE1O75459 146 aa13.5□□□□□ -0.25
NCDN-203ENST00000373253 CRCPO75575 148 aa13.5□□□□□ -0.25
NCDN-203ENST00000373253 ABHD2P08910 425 aa13.5□□□□□ -0.25
NCDN-203ENST00000373253 SERPINB5P36952 375 aa13.5□□□□□ -0.25
NCDN-203ENST00000373253 CSE1LP55060 971 aaKnown RBP13.5□□□□□ -0.25
NCDN-203ENST00000373253 DAOAP59103 153 aa13.5□□□□□ -0.25
NCDN-203ENST00000373253 MPP3Q13368 585 aa13.5□□□□□ -0.25
NCDN-203ENST00000373253 KIAA0319Q5VV43 1072 aa13.5□□□□□ -0.25
NCDN-203ENST00000373253 ITPRIPL1Q6GPH6 555 aa13.5□□□□□ -0.25
NCDN-203ENST00000373253 ADGRD1Q6QNK2 874 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms