RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 TBC1D12O60347 775 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 TNFAIP8O95379 198 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 TGFB3P10600 412 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 NDST1P52848 882 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 POLR2LP62875 67 aaKnown RBP11.76□□□□□ -0.53
VCL-202ENST00000372755 SLC34A1Q06495 639 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 BCL2L1Q07817 233 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 ADIGQ0VDE8 80 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 SLC27A1Q6PCB7 646 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 EDEM1Q92611 657 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 ELOVL4Q9GZR5 314 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 RIBC2Q9H4K1 309 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 NDOR1Q9UHB4 597 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 TMCO1Q9UM00 188 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 ZBTB14O43829 449 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 ATP6V1G2O95670 118 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 PAEPP09466 180 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 UMPSP11172 480 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 TPH1P17752 444 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 MGAT1P26572 445 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 RFX5P48382 616 aaPredicted RBP11.76□□□□□ -0.53
VCL-202ENST00000372755 HK2P52789 917 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 NFIAQ12857 509 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 TAF13Q15543 124 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 ZNF470Q6ECI4 717 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 PMF1Q6P1K2 205 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 TMC5Q6UXY8 1006 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 AHCYL2Q96HN2 611 aaKnown RBP11.76□□□□□ -0.53
VCL-202ENST00000372755 SLC25A23Q9BV35 468 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 ASB7Q9H672 318 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 GALNT8Q9NY28 637 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 MAPRE3Q9UPY8 281 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 DUSP10Q9Y6W6 482 aa11.76□□□□□ -0.53
VCL-202ENST00000372755 A0A096LPK6 155 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 LRRC14BA6NHZ5 514 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 AKAP3O75969 853 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 TRAF3Q13114 568 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 SAMD4BQ5PRF9 694 aaKnown RBP11.75□□□□□ -0.53
VCL-202ENST00000372755 RD3Q7Z3Z2 195 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 CENPIQ92674 756 aaPredicted RBP11.75□□□□□ -0.53
VCL-202ENST00000372755 AKAP7Q9P0M2 348 aaPredicted RBP11.75□□□□□ -0.53
VCL-202ENST00000372755 MYRFQ9Y2G1 1151 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 H3BRB1 525 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 TSPAN3O60637 253 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 MICAL2O94851 1124 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 KLHL18O94889 574 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 ECDO95905 644 aaPredicted RBP11.75□□□□□ -0.53
VCL-202ENST00000372755 KLRC2P26717 231 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 NTSP30990 170 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 S100A3P33764 101 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 RNF145Q96MT1 663 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 TUT1Q9H6E5 874 aaKnown RBP11.75□□□□□ -0.53
VCL-202ENST00000372755 NEK6Q9HC98 313 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 ME2P23368 584 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 ACAP1Q15027 740 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 OTUD3Q5T2D3 398 aaPredicted RBP11.75□□□□□ -0.53
VCL-202ENST00000372755 MFSD7Q6UXD7 560 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 SYT12Q8IV01 421 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 ITFG1Q8TB96 612 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 REXO4Q9GZR2 422 aaKnown RBP11.75□□□□□ -0.53
VCL-202ENST00000372755 TNPO3Q9Y5L0 923 aaKnown RBP11.75□□□□□ -0.53
VCL-202ENST00000372755 FCHO1O14526 889 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 MT-CO1P00395 513 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 LBPP18428 481 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 IL12RB1P42701 662 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 CACNA2D1P54289 1103 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 KLHL24Q6TFL4 600 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 SH3BP5LQ7L8J4 393 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 TFAP2DQ7Z6R9 452 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 OR6Y1Q8NGX8 325 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 LRRC4BQ9NT99 713 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 OPTCQ9UBM4 332 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 SIK3Q9Y2K2 1263 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 EFCAB10A6NFE3 127 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 BTN3A1O00481 513 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 ALADP13716 330 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 DGKAP23743 735 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 NEK3P51956 506 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 FAM20CQ8IXL6 584 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 LGI2Q8N0V4 545 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 PDCD2LQ9BRP1 358 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 ATXN3LQ9H3M9 355 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 POMKQ9H5K3 350 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 CNGB3Q9NQW8 809 aa11.75□□□□□ -0.53
VCL-202ENST00000372755 ARIH1Q9Y4X5 557 aaPredicted RBP11.75□□□□□ -0.53
VCL-202ENST00000372755 CARNS1A5YM72 827 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 TRDMT1O14717 391 aaKnown RBP11.74□□□□□ -0.53
VCL-202ENST00000372755 EPN2O95208 641 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 AMHP03971 560 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 ZNF286BP0CG31 522 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 WARSP23381 471 aaKnown RBP11.74□□□□□ -0.53
VCL-202ENST00000372755 KLHL17Q6TDP4 642 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 RBM43Q6ZSC3 357 aaKnown RBP11.74□□□□□ -0.53
VCL-202ENST00000372755 ZNF410Q86VK4 478 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 SYTL5Q8TDW5 730 aaPredicted RBP11.74□□□□□ -0.53
VCL-202ENST00000372755 UNKQ9C0B0 810 aaKnown RBP11.74□□□□□ -0.53
VCL-202ENST00000372755 TMEM216Q9P0N5 145 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 RAG1P15918 1043 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 STAT5AP42229 794 aa11.74□□□□□ -0.53
VCL-202ENST00000372755 CLK2P49760 499 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms