RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 TMCO5AQ8N6Q1 288 aa10.7□□□□□ -0.7
NUP188-201ENST00000372577 TERB1Q8NA31 727 aa10.7□□□□□ -0.7
NUP188-201ENST00000372577 LPCAT1Q8NF37 534 aa10.7□□□□□ -0.7
NUP188-201ENST00000372577 OR56A4Q8NGH8 313 aa10.7□□□□□ -0.7
NUP188-201ENST00000372577 ZCCHC2Q9C0B9 1178 aaKnown RBP10.7□□□□□ -0.7
NUP188-201ENST00000372577 KLHL4Q9C0H6 718 aa10.7□□□□□ -0.7
NUP188-201ENST00000372577 IL1RL2Q9HB29 575 aa10.7□□□□□ -0.7
NUP188-201ENST00000372577 CYP4F12Q9HCS2 524 aa10.7□□□□□ -0.7
NUP188-201ENST00000372577 UBP1Q9NZI7 540 aa10.7□□□□□ -0.7
NUP188-201ENST00000372577 C15orf38-AP3S2A0A0A6YYH1 394 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 TTLL13PA6NNM8 815 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 MYO1GB0I1T2 1018 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 TMEM114B3SHH9 223 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 DDX3YO15523 660 aaKnown RBP10.69□□□□□ -0.7
NUP188-201ENST00000372577 LZTS3O60299 673 aaPredicted RBP10.69□□□□□ -0.7
NUP188-201ENST00000372577 IFNA14P01570 189 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 CYP2A7P20853 494 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 MLH1P40692 756 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 SMARCB1Q12824 385 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 CNTN1Q12860 1018 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 FAM110CQ1W6H9 321 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 BRMS1LQ5PSV4 323 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 DCLRE1AQ6PJP8 1040 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 LCLAT1Q6UWP7 414 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 ARPINQ7Z6K5 226 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 TRIM69Q86WT6 500 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 RDH11Q8TC12 318 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 DACH2Q96NX9 599 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 PANX3Q96QZ0 392 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 RAD18Q9NS91 495 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 E9PBE3 544 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 KCNK1O00180 336 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 BIRC5O15392 142 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 KLHL41O60662 606 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 VAPBO95292 243 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 SERPIND1P05546 499 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 KCNA4P22459 653 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 CES1P23141 567 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 HPCAP84074 193 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 VPS33AQ96AX1 596 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 ELMO3Q96BJ8 720 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 DUSP16Q9BY84 665 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 DMAC2Q9NW81 257 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 TMEM161AQ9NX61 479 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 MARCH2Q9P0N8 246 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 SF3B1O75533 1304 aaKnown RBP eCLIP10.69□□□□□ -0.72e-6■■■■■ 103.8
NUP188-201ENST00000372577 HTR7P34969 479 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 ATP6V1E1P36543 226 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 SCNN1GP51170 649 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 RAP1GDS1P52306 607 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 PLOD1Q02809 727 aaPredicted RBP10.69□□□□□ -0.7
NUP188-201ENST00000372577 TBL3Q12788 808 aaKnown RBP10.69□□□□□ -0.7
NUP188-201ENST00000372577 DMC1Q14565 340 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 NOL9Q5SY16 702 aaKnown RBP10.69□□□□□ -0.7
NUP188-201ENST00000372577 LGI2Q8N0V4 545 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 YDJCA8MPS7 323 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 USP1O94782 785 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 APOA1P02647 267 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 CYP2A6P11509 494 aaPredicted RBP10.69□□□□□ -0.7
NUP188-201ENST00000372577 TFE3P19532 575 aaPredicted RBP10.69□□□□□ -0.7
NUP188-201ENST00000372577 CLCN5P51795 746 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 CCNG1P51959 295 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 MRPS5P82675 430 aaKnown RBP10.69□□□□□ -0.7
NUP188-201ENST00000372577 CSTF3Q12996 717 aaKnown RBP10.69□□□□□ -0.7
NUP188-201ENST00000372577 PDK4Q16654 411 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 ATP6AP1LQ52LC2 224 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 AADACL2Q6P093 401 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 MPP6Q9NZW5 540 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 SPASTQ9UBP0 616 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 SNX3O60493 162 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 CKBP12277 381 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 CYP3A5P20815 502 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 ATP5C1P36542 298 aaKnown RBP10.69□□□□□ -0.7
NUP188-201ENST00000372577 ERAP2Q6P179 960 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 SH3BP5LQ7L8J4 393 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 GLT6D1Q7Z4J2 308 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 CENPLQ8N0S6 344 aaPredicted RBP10.69□□□□□ -0.7
NUP188-201ENST00000372577 CLEC4DQ8WXI8 215 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 CERS2Q96G23 380 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 UTP6Q9NYH9 597 aaKnown RBP10.69□□□□□ -0.7
NUP188-201ENST00000372577 LNPEPQ9UIQ6 1025 aa10.69□□□□□ -0.7
NUP188-201ENST00000372577 STK25O00506 426 aa10.68□□□□□ -0.7
NUP188-201ENST00000372577 BEX3Q00994 111 aa10.68□□□□□ -0.7
NUP188-201ENST00000372577 CAMK2GQ13555 558 aaPredicted RBP10.68□□□□□ -0.7
NUP188-201ENST00000372577 EEF1DP3Q658K8 133 aa10.68□□□□□ -0.7
NUP188-201ENST00000372577 TTC33Q6PID6 262 aaPredicted RBP10.68□□□□□ -0.7
NUP188-201ENST00000372577 TFAP2DQ7Z6R9 452 aa10.68□□□□□ -0.7
NUP188-201ENST00000372577 P3H2Q8IVL5 708 aa10.68□□□□□ -0.7
NUP188-201ENST00000372577 SEMA4DQ92854 862 aa10.68□□□□□ -0.7
NUP188-201ENST00000372577 EBNA1BP2Q99848 306 aaKnown RBP10.68□□□□□ -0.7
NUP188-201ENST00000372577 ACP6Q9NPH0 428 aa10.68□□□□□ -0.7
NUP188-201ENST00000372577 TNPO3Q9Y5L0 923 aaKnown RBP10.68□□□□□ -0.7
NUP188-201ENST00000372577 ZSCAN9O15535 394 aaPredicted RBP10.68□□□□□ -0.7
NUP188-201ENST00000372577 EFCAB14O75071 495 aa10.68□□□□□ -0.7
NUP188-201ENST00000372577 ZSCAN5DPP0CG00 497 aa10.68□□□□□ -0.7
NUP188-201ENST00000372577 ARF4P18085 180 aaPredicted RBP10.68□□□□□ -0.7
NUP188-201ENST00000372577 ADRA1DP25100 572 aa10.68□□□□□ -0.7
NUP188-201ENST00000372577 MARCKSL1P49006 195 aa10.68□□□□□ -0.7
NUP188-201ENST00000372577 POLR2LP62875 67 aaKnown RBP10.68□□□□□ -0.7
NUP188-201ENST00000372577 NEPROQ6NW34 567 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms