RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 CNTNAP3BQ96NU0 1288 aa19.5■□□□□ 0.71
TMEM53-201ENST00000372235 RPRD1AQ96P16 312 aaPredicted RBP19.5■□□□□ 0.71
TMEM53-201ENST00000372235 PRMT1Q99873 361 aaKnown RBP19.5■□□□□ 0.71
TMEM53-201ENST00000372235 CNTNAP3Q9BZ76 1288 aa19.5■□□□□ 0.71
TMEM53-201ENST00000372235 MIR1-1HGQ9H1L0 117 aa19.5■□□□□ 0.71
TMEM53-201ENST00000372235 CD93Q9NPY3 652 aa19.5■□□□□ 0.71
TMEM53-201ENST00000372235 SAMSN1Q9NSI8 373 aaKnown RBP19.5■□□□□ 0.71
TMEM53-201ENST00000372235 SYNJ2BP-COX16A0A087WUM0 186 aa19.49■□□□□ 0.71
TMEM53-201ENST00000372235 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.49■□□□□ 0.71
TMEM53-201ENST00000372235 M0QYT0 321 aa19.49■□□□□ 0.71
TMEM53-201ENST00000372235 CLDN11O75508 207 aa19.49■□□□□ 0.71
TMEM53-201ENST00000372235 TRIM16O95361 564 aa19.49■□□□□ 0.71
TMEM53-201ENST00000372235 SEMA4FO95754 770 aa19.49■□□□□ 0.71
TMEM53-201ENST00000372235 AFF3P51826 1226 aaKnown RBP19.49■□□□□ 0.71
TMEM53-201ENST00000372235 KCNMA1Q12791 1236 aa19.49■□□□□ 0.71
TMEM53-201ENST00000372235 NME3Q13232 169 aa19.49■□□□□ 0.71
TMEM53-201ENST00000372235 ZNF177Q13360 481 aaPredicted RBP19.49■□□□□ 0.71
TMEM53-201ENST00000372235 PTPN20Q4JDL3 420 aa19.49■□□□□ 0.71
TMEM53-201ENST00000372235 CCAR2Q8N163 923 aaKnown RBP19.49■□□□□ 0.71
TMEM53-201ENST00000372235 SKA1Q96BD8 255 aa19.49■□□□□ 0.71
TMEM53-201ENST00000372235 NAA15Q9BXJ9 866 aaKnown RBP19.49■□□□□ 0.71
TMEM53-201ENST00000372235 WDCPQ9H6R7 721 aa19.49■□□□□ 0.71
TMEM53-201ENST00000372235 ANO10Q9NW15 660 aa19.49■□□□□ 0.71
TMEM53-201ENST00000372235 COX16Q9P0S2 106 aa19.49■□□□□ 0.71
TMEM53-201ENST00000372235 XPO7Q9UIA9 1087 aaKnown RBP19.49■□□□□ 0.71
TMEM53-201ENST00000372235 INTS6Q9UL03 887 aaKnown RBP19.49■□□□□ 0.71
TMEM53-201ENST00000372235 FHOD1Q9Y613 1164 aa19.49■□□□□ 0.71
TMEM53-201ENST00000372235 GRAP2O75791 330 aa19.48■□□□□ 0.71
TMEM53-201ENST00000372235 ADH1BP00325 375 aa19.48■□□□□ 0.71
TMEM53-201ENST00000372235 ZNF883P0CG24 379 aa19.48■□□□□ 0.71
TMEM53-201ENST00000372235 MAOBP27338 520 aa19.48■□□□□ 0.71
TMEM53-201ENST00000372235 HSP90AA4PQ58FG1 418 aa19.48■□□□□ 0.71
TMEM53-201ENST00000372235 FSCBQ5H9T9 825 aa19.48■□□□□ 0.71
TMEM53-201ENST00000372235 LRRC31Q6UY01 552 aa19.48■□□□□ 0.71
TMEM53-201ENST00000372235 RBM43Q6ZSC3 357 aaKnown RBP19.48■□□□□ 0.71
TMEM53-201ENST00000372235 ARCQ7LC44 396 aa19.48■□□□□ 0.71
TMEM53-201ENST00000372235 DSG4Q86SJ6 1040 aa19.48■□□□□ 0.71
TMEM53-201ENST00000372235 PIP4P1Q86T03 277 aa19.48■□□□□ 0.71
TMEM53-201ENST00000372235 FAM124AQ86V42 546 aa19.48■□□□□ 0.71
TMEM53-201ENST00000372235 CACUL1Q86Y37 369 aa19.48■□□□□ 0.71
TMEM53-201ENST00000372235 ZNF366Q8N895 744 aa19.48■□□□□ 0.71
TMEM53-201ENST00000372235 GANCQ8TET4 914 aa19.48■□□□□ 0.71
TMEM53-201ENST00000372235 MYO19Q96H55 970 aa19.48■□□□□ 0.71
TMEM53-201ENST00000372235 MRGPRX3Q96LB0 322 aa19.48■□□□□ 0.71
TMEM53-201ENST00000372235 PABPC3Q9H361 631 aaKnown RBP19.48■□□□□ 0.71
TMEM53-201ENST00000372235 SLC25A13Q9UJS0 675 aa19.48■□□□□ 0.71
TMEM53-201ENST00000372235 FZD4Q9ULV1 537 aa19.48■□□□□ 0.71
TMEM53-201ENST00000372235 MUC22E2RYF6 1773 aaPredicted RBP19.47■□□□□ 0.71
TMEM53-201ENST00000372235 LRRC72A6NJI9 287 aa19.47■□□□□ 0.71
TMEM53-201ENST00000372235 F8VZ95 297 aa19.47■□□□□ 0.71
TMEM53-201ENST00000372235 SIN3BO75182 1162 aa19.47■□□□□ 0.71
TMEM53-201ENST00000372235 MBD3O95983 291 aa19.47■□□□□ 0.71
TMEM53-201ENST00000372235 ACSL1P33121 698 aa19.47■□□□□ 0.71
TMEM53-201ENST00000372235 CDH4P55283 916 aa19.47■□□□□ 0.71
TMEM53-201ENST00000372235 GRIK2Q13002 908 aa19.47■□□□□ 0.71
TMEM53-201ENST00000372235 AUHQ13825 339 aaKnown RBP19.47■□□□□ 0.71
TMEM53-201ENST00000372235 ELAVL3Q14576 367 aaKnown RBP19.47■□□□□ 0.71
TMEM53-201ENST00000372235 SLC25A52Q3SY17 297 aa19.47■□□□□ 0.71
TMEM53-201ENST00000372235 DPY19L2P1Q6NXN4 242 aa19.47■□□□□ 0.71
TMEM53-201ENST00000372235 FBXL22Q6P050 247 aa19.47■□□□□ 0.71
TMEM53-201ENST00000372235 ZCCHC9Q8N567 271 aaKnown RBP19.47■□□□□ 0.71
TMEM53-201ENST00000372235 DEFB124Q8NES8 71 aa19.47■□□□□ 0.71
TMEM53-201ENST00000372235 SNX19Q92543 992 aa19.47■□□□□ 0.71
TMEM53-201ENST00000372235 C1orf74Q96LT6 269 aa19.47■□□□□ 0.71
TMEM53-201ENST00000372235 NPY6RQ99463 290 aa19.47■□□□□ 0.71
TMEM53-201ENST00000372235 OMDQ99983 421 aa19.47■□□□□ 0.71
TMEM53-201ENST00000372235 FBXL12Q9NXK8 326 aa19.47■□□□□ 0.71
TMEM53-201ENST00000372235 EIF2B4Q9UI10 523 aaKnown RBP19.47■□□□□ 0.71
TMEM53-201ENST00000372235 AJAP1Q9UKB5 411 aaPredicted RBP19.47■□□□□ 0.71
TMEM53-201ENST00000372235 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.47■□□□□ 0.71
TMEM53-201ENST00000372235 PCDHB9Q9Y5E1 797 aa19.47■□□□□ 0.71
TMEM53-201ENST00000372235 PI4KAP42356 2102 aa19.46■□□□□ 0.71
TMEM53-201ENST00000372235 C5AR1P21730 350 aa19.46■□□□□ 0.71
TMEM53-201ENST00000372235 CD27P26842 260 aa19.46■□□□□ 0.71
TMEM53-201ENST00000372235 CXCR3P49682 368 aa19.46■□□□□ 0.71
TMEM53-201ENST00000372235 PITX1P78337 314 aaPredicted RBP19.46■□□□□ 0.71
TMEM53-201ENST00000372235 KRT83P78385 493 aa19.46■□□□□ 0.71
TMEM53-201ENST00000372235 DEUP1Q05D60 604 aa19.46■□□□□ 0.71
TMEM53-201ENST00000372235 SUZ12Q15022 739 aaKnown RBP19.46■□□□□ 0.71
TMEM53-201ENST00000372235 CST6Q15828 149 aa19.46■□□□□ 0.71
TMEM53-201ENST00000372235 C5orf22Q49AR2 442 aa19.46■□□□□ 0.71
TMEM53-201ENST00000372235 C9orf64Q5T6V5 341 aa19.46■□□□□ 0.71
TMEM53-201ENST00000372235 FAM102AQ5T9C2 384 aaPredicted RBP19.46■□□□□ 0.71
TMEM53-201ENST00000372235 CDKAL1Q5VV42 579 aa19.46■□□□□ 0.71
TMEM53-201ENST00000372235 TRIM72Q6ZMU5 477 aa19.46■□□□□ 0.71
TMEM53-201ENST00000372235 DHX40Q8IX18 779 aaKnown RBP19.46■□□□□ 0.71
TMEM53-201ENST00000372235 NT5C3BQ969T7 300 aa19.46■□□□□ 0.71
TMEM53-201ENST00000372235 MYEOVQ96EZ4 313 aa19.46■□□□□ 0.71
TMEM53-201ENST00000372235 SPAG5Q96R06 1193 aa19.46■□□□□ 0.71
TMEM53-201ENST00000372235 ARHGEF38Q9NXL2 777 aa19.46■□□□□ 0.71
TMEM53-201ENST00000372235 TAB2Q9NYJ8 693 aa19.46■□□□□ 0.71
TMEM53-201ENST00000372235 ADAMTS1Q9UHI8 967 aa19.46■□□□□ 0.71
TMEM53-201ENST00000372235 HS3ST4Q9Y661 456 aa19.46■□□□□ 0.71
TMEM53-201ENST00000372235 GIPC1O14908 333 aa19.45■□□□□ 0.7
TMEM53-201ENST00000372235 DFNA5O60443 496 aa19.45■□□□□ 0.7
TMEM53-201ENST00000372235 PAGE1O75459 146 aa19.45■□□□□ 0.7
TMEM53-201ENST00000372235 PNMA6AP0CW24 399 aaPredicted RBP19.45■□□□□ 0.7
TMEM53-201ENST00000372235 PDGFRAP16234 1089 aa19.45■□□□□ 0.7
TMEM53-201ENST00000372235 GRIA4P48058 902 aa19.45■□□□□ 0.7
TMEM53-201ENST00000372235 SULT1E1P49888 294 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms