RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 GAREM1Q9H706 876 aa16.68■□□□□ 0.26
VMA21-202ENST00000370361 INTS6Q9UL03 887 aaKnown RBP16.68■□□□□ 0.26
VMA21-202ENST00000370361 ERVW-1Q9UQF0 538 aa16.68■□□□□ 0.26
VMA21-202ENST00000370361 SPAARA0A1B0GVQ0 90 aa16.67■□□□□ 0.26
VMA21-202ENST00000370361 SH3BP5O60239 455 aa16.67■□□□□ 0.26
VMA21-202ENST00000370361 CALCAP01258 141 aa16.67■□□□□ 0.26
VMA21-202ENST00000370361 SLC9A1P19634 815 aa16.67■□□□□ 0.26
VMA21-202ENST00000370361 SCNN1AP37088 669 aa16.67■□□□□ 0.26
VMA21-202ENST00000370361 ELAVL3Q14576 367 aaKnown RBP16.67■□□□□ 0.26
VMA21-202ENST00000370361 CST6Q15828 149 aa16.67■□□□□ 0.26
VMA21-202ENST00000370361 CAMK4Q16566 473 aa16.67■□□□□ 0.26
VMA21-202ENST00000370361 INAVAQ3KP66 663 aa16.67■□□□□ 0.26
VMA21-202ENST00000370361 RAP1GAP2Q684P5 730 aa16.67■□□□□ 0.26
VMA21-202ENST00000370361 DBX2Q6ZNG2 339 aa16.67■□□□□ 0.26
VMA21-202ENST00000370361 SLC26A9Q7LBE3 791 aa16.67■□□□□ 0.26
VMA21-202ENST00000370361 RAB44Q7Z6P3 723 aaPredicted RBP16.67■□□□□ 0.26
VMA21-202ENST00000370361 DSG4Q86SJ6 1040 aa16.67■□□□□ 0.26
VMA21-202ENST00000370361 ZNF366Q8N895 744 aa16.67■□□□□ 0.26
VMA21-202ENST00000370361 ZNF397Q8NF99 534 aaPredicted RBP16.67■□□□□ 0.26
VMA21-202ENST00000370361 ADAM32Q8TC27 787 aa16.67■□□□□ 0.26
VMA21-202ENST00000370361 GATA6Q92908 595 aa16.67■□□□□ 0.26
VMA21-202ENST00000370361 IGSF8Q969P0 613 aa16.67■□□□□ 0.26
VMA21-202ENST00000370361 MRGPRX3Q96LB0 322 aa16.67■□□□□ 0.26
VMA21-202ENST00000370361 C6orf106Q9H6K1 298 aaPredicted RBP16.67■□□□□ 0.26
VMA21-202ENST00000370361 SYNCQ9H7C4 482 aa16.67■□□□□ 0.26
VMA21-202ENST00000370361 TM7SF3Q9NS93 570 aa16.67■□□□□ 0.26
VMA21-202ENST00000370361 DDIT4Q9NX09 232 aa16.67■□□□□ 0.26
VMA21-202ENST00000370361 FBXL12Q9NXK8 326 aa16.67■□□□□ 0.26
VMA21-202ENST00000370361 CYTH4Q9UIA0 394 aa16.67■□□□□ 0.26
VMA21-202ENST00000370361 SIN3BO75182 1162 aa16.66■□□□□ 0.26
VMA21-202ENST00000370361 DAB1O75553 588 aa16.66■□□□□ 0.26
VMA21-202ENST00000370361 KRT37O76014 449 aa16.66■□□□□ 0.26
VMA21-202ENST00000370361 C5AR1P21730 350 aa16.66■□□□□ 0.26
VMA21-202ENST00000370361 NOS2P35228 1153 aa16.66■□□□□ 0.26
VMA21-202ENST00000370361 NUDT1P36639 197 aa16.66■□□□□ 0.26
VMA21-202ENST00000370361 RACK1P63244 317 aaKnown RBP16.66■□□□□ 0.26
VMA21-202ENST00000370361 HLA-BQ31612 363 aa16.66■□□□□ 0.26
VMA21-202ENST00000370361 C9orf64Q5T6V5 341 aa16.66■□□□□ 0.26
VMA21-202ENST00000370361 KIAA0895LQ68EN5 471 aa16.66■□□□□ 0.26
VMA21-202ENST00000370361 IRF2BP1Q8IU81 584 aa16.66■□□□□ 0.26
VMA21-202ENST00000370361 CFAP52Q8N1V2 620 aa16.66■□□□□ 0.26
VMA21-202ENST00000370361 MSANTD4Q8NCY6 345 aa16.66■□□□□ 0.26
VMA21-202ENST00000370361 OR2I1PQ8NGU4 316 aa16.66■□□□□ 0.26
VMA21-202ENST00000370361 OR2T34Q8NGX1 318 aa16.66■□□□□ 0.26
VMA21-202ENST00000370361 GANCQ8TET4 914 aa16.66■□□□□ 0.26
VMA21-202ENST00000370361 ADAMTS14Q8WXS8 1223 aa16.66■□□□□ 0.26
VMA21-202ENST00000370361 RNF34Q969K3 372 aa16.66■□□□□ 0.26
VMA21-202ENST00000370361 BIRC7Q96CA5 298 aa16.66■□□□□ 0.26
VMA21-202ENST00000370361 CPXM1Q96SM3 734 aa16.66■□□□□ 0.26
VMA21-202ENST00000370361 PRMT1Q99873 361 aaKnown RBP16.66■□□□□ 0.26
VMA21-202ENST00000370361 TMEM121BQ9BXQ6 578 aaPredicted RBP16.66■□□□□ 0.26
VMA21-202ENST00000370361 KDM4CQ9H3R0 1056 aa16.66■□□□□ 0.26
VMA21-202ENST00000370361 NDST4Q9H3R1 872 aa16.66■□□□□ 0.26
VMA21-202ENST00000370361 CLSTN2Q9H4D0 955 aa16.66■□□□□ 0.26
VMA21-202ENST00000370361 TM9SF3Q9HD45 589 aa16.66■□□□□ 0.26
VMA21-202ENST00000370361 PCOLCE2Q9UKZ9 415 aa16.66■□□□□ 0.26
VMA21-202ENST00000370361 STAP1Q9ULZ2 295 aa16.66■□□□□ 0.26
VMA21-202ENST00000370361 C1QTNF9BB2RNN3 333 aa16.65■□□□□ 0.26
VMA21-202ENST00000370361 YKT6O15498 198 aa16.65■□□□□ 0.26
VMA21-202ENST00000370361 HYAL3O43820 417 aaPredicted RBP16.65■□□□□ 0.26
VMA21-202ENST00000370361 PCDHGA12O60330 932 aa16.65■□□□□ 0.26
VMA21-202ENST00000370361 CBFA2T3O75081 653 aa16.65■□□□□ 0.26
VMA21-202ENST00000370361 F9P00740 461 aa16.65■□□□□ 0.26
VMA21-202ENST00000370361 C1QTNF9P0C862 333 aa16.65■□□□□ 0.26
VMA21-202ENST00000370361 CCR5P51681 352 aa16.65■□□□□ 0.26
VMA21-202ENST00000370361 SLC6A3Q01959 620 aa16.65■□□□□ 0.26
VMA21-202ENST00000370361 FSCBQ5H9T9 825 aa16.65■□□□□ 0.26
VMA21-202ENST00000370361 BRMS1LQ5PSV4 323 aa16.65■□□□□ 0.26
VMA21-202ENST00000370361 GJB7Q6PEY0 223 aa16.65■□□□□ 0.26
VMA21-202ENST00000370361 OLFML1Q6UWY5 402 aa16.65■□□□□ 0.26
VMA21-202ENST00000370361 SND1Q7KZF4 910 aaKnown RBP eCLIP16.65■□□□□ 0.26
VMA21-202ENST00000370361 ADAT2Q7Z6V5 191 aaKnown RBP16.65■□□□□ 0.26
VMA21-202ENST00000370361 FAM71AQ8IYT1 594 aa16.65■□□□□ 0.26
VMA21-202ENST00000370361 DEFB106AQ8N104 65 aa16.65■□□□□ 0.26
VMA21-202ENST00000370361 CCAR2Q8N163 923 aaKnown RBP16.65■□□□□ 0.26
VMA21-202ENST00000370361 TMEM35BQ8NCS4 154 aa16.65■□□□□ 0.26
VMA21-202ENST00000370361 SPAG5Q96R06 1193 aa16.65■□□□□ 0.26
VMA21-202ENST00000370361 OMDQ99983 421 aa16.65■□□□□ 0.26
VMA21-202ENST00000370361 DNAJC12Q9UKB3 198 aa16.65■□□□□ 0.26
VMA21-202ENST00000370361 ANKRD6Q9Y2G4 727 aa16.65■□□□□ 0.26
VMA21-202ENST00000370361 A0A1B0GVT2 93 aa16.64■□□□□ 0.25
VMA21-202ENST00000370361 A0A1W2PPC4 97 aa16.64■□□□□ 0.25
VMA21-202ENST00000370361 ALOX15BO15296 676 aa16.64■□□□□ 0.25
VMA21-202ENST00000370361 SLC7A4O43246 635 aa16.64■□□□□ 0.25
VMA21-202ENST00000370361 CLDN11O75508 207 aa16.64■□□□□ 0.25
VMA21-202ENST00000370361 FSBPO95073 299 aa16.64■□□□□ 0.25
VMA21-202ENST00000370361 GOT1P17174 413 aa16.64■□□□□ 0.25
VMA21-202ENST00000370361 CDH5P33151 784 aaPredicted RBP16.64■□□□□ 0.25
VMA21-202ENST00000370361 CCT8P50990 548 aa16.64■□□□□ 0.25
VMA21-202ENST00000370361 VWA3BQ502W6 1294 aa16.64■□□□□ 0.25
VMA21-202ENST00000370361 FAM46CQ5VWP2 391 aa16.64■□□□□ 0.25
VMA21-202ENST00000370361 OR6B2Q6IFH4 312 aa16.64■□□□□ 0.25
VMA21-202ENST00000370361 DHX40Q8IX18 779 aaKnown RBP16.64■□□□□ 0.25
VMA21-202ENST00000370361 WDTC1Q8N5D0 677 aa16.64■□□□□ 0.25
VMA21-202ENST00000370361 MYEOVQ96EZ4 313 aa16.64■□□□□ 0.25
VMA21-202ENST00000370361 PGAP3Q96FM1 320 aaPredicted RBP16.64■□□□□ 0.25
VMA21-202ENST00000370361 RPRD1AQ96P16 312 aaPredicted RBP16.64■□□□□ 0.25
VMA21-202ENST00000370361 TUBGCP2Q9BSJ2 902 aa16.64■□□□□ 0.25
VMA21-202ENST00000370361 ACE2Q9BYF1 805 aaPredicted RBP16.64■□□□□ 0.25
VMA21-202ENST00000370361 LMBRD1Q9NUN5 540 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms