RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 BRCC3P46736 316 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 MAGOHP61326 146 aaKnown RBP7.09□□□□□ -1.27
CSDE1-204ENST00000369530 FKBP3Q00688 224 aaKnown RBP7.09□□□□□ -1.27
CSDE1-204ENST00000369530 SMARCB1Q12824 385 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 CCINQ13939 588 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 RCN2Q14257 317 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 DENND2CQ68D51 928 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 GRAMD4Q6IC98 578 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 SLFN12LQ6IEE8 588 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 PTCRAQ6ISU1 281 aaPredicted RBP7.09□□□□□ -1.27
CSDE1-204ENST00000369530 VITQ6UXI7 678 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 ACAD11Q709F0 780 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 HS2ST1Q7LGA3 356 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 TMC3Q7Z5M5 1100 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 ETFBKMTQ8IXQ9 262 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 MAGOHBQ96A72 148 aaKnown RBP7.09□□□□□ -1.27
CSDE1-204ENST00000369530 ACCSQ96QU6 501 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 TLR10Q9BXR5 811 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 EPB41L4BQ9H329 900 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 SLC38A7Q9NVC3 462 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 INTUQ9ULD6 942 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 UBQLN1Q9UMX0 589 aaKnown RBP7.09□□□□□ -1.27
CSDE1-204ENST00000369530 PCDHB12Q9Y5F1 795 aa7.09□□□□□ -1.27
CSDE1-204ENST00000369530 MACROD2A1Z1Q3 448 aa7.09□□□□□ -1.28
CSDE1-204ENST00000369530 GTPBP10A4D1E9 387 aaKnown RBP7.09□□□□□ -1.28
CSDE1-204ENST00000369530 LGALS16A8MUM7 142 aa7.09□□□□□ -1.28
CSDE1-204ENST00000369530 K7ESF4 209 aa7.09□□□□□ -1.28
CSDE1-204ENST00000369530 AGTP01019 485 aa7.09□□□□□ -1.28
CSDE1-204ENST00000369530 CHN1P15882 459 aa7.09□□□□□ -1.28
CSDE1-204ENST00000369530 ACADSBP45954 432 aa7.09□□□□□ -1.28
CSDE1-204ENST00000369530 CYP2J2P51589 502 aa7.09□□□□□ -1.28
CSDE1-204ENST00000369530 YARSP54577 528 aaKnown RBP7.09□□□□□ -1.28
CSDE1-204ENST00000369530 RAPGEF1Q13905 1077 aa7.09□□□□□ -1.28
CSDE1-204ENST00000369530 SEZ6Q53EL9 994 aa7.09□□□□□ -1.28
CSDE1-204ENST00000369530 KLHDC10Q6PID8 442 aa7.09□□□□□ -1.28
CSDE1-204ENST00000369530 TMEM105Q8N8V8 129 aa7.09□□□□□ -1.28
CSDE1-204ENST00000369530 SLC7A6OSQ96CW6 309 aaPredicted RBP7.09□□□□□ -1.28
CSDE1-204ENST00000369530 FUBP3Q96I24 572 aaKnown RBP eCLIP7.09□□□□□ -1.28
CSDE1-204ENST00000369530 NECTIN4Q96NY8 510 aa7.09□□□□□ -1.28
CSDE1-204ENST00000369530 BIRC8Q96P09 236 aa7.09□□□□□ -1.28
CSDE1-204ENST00000369530 ACAP3Q96P50 834 aa7.09□□□□□ -1.28
CSDE1-204ENST00000369530 NUDCD1Q96RS6 583 aa7.09□□□□□ -1.28
CSDE1-204ENST00000369530 ZNF184Q99676 751 aaPredicted RBP7.09□□□□□ -1.28
CSDE1-204ENST00000369530 SIKE1Q9BRV8 207 aa7.09□□□□□ -1.28
CSDE1-204ENST00000369530 EPB41L5Q9HCM4 733 aa7.09□□□□□ -1.28
CSDE1-204ENST00000369530 HPS4Q9NQG7 708 aa7.09□□□□□ -1.28
CSDE1-204ENST00000369530 MAN1C1Q9NR34 630 aa7.09□□□□□ -1.28
CSDE1-204ENST00000369530 CYTH4Q9UIA0 394 aa7.09□□□□□ -1.28
CSDE1-204ENST00000369530 ZNF180Q9UJW8 692 aa7.09□□□□□ -1.28
CSDE1-204ENST00000369530 AGO2Q9UKV8 859 aaKnown RBP7.09□□□□□ -1.28
CSDE1-204ENST00000369530 MYO10Q9HD67 2058 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 OR6C75A6NL08 312 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 CCDC169A6NNP5 214 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 GOLGA8TH3BQL2 631 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 M0QZ92 97 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 LMO2P25791 158 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 HPDP32754 393 aaPredicted RBP7.08□□□□□ -1.28
CSDE1-204ENST00000369530 GABRB2P47870 512 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 XIAPP98170 497 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 CYP27A1Q02318 531 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 SLC34A1Q06495 639 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 GAS6Q14393 721 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 SNRNP35Q16560 246 aaKnown RBP7.08□□□□□ -1.28
CSDE1-204ENST00000369530 MUM1Q2TAK8 710 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 INTS6LQ5JSJ4 861 aaKnown RBP7.08□□□□□ -1.28
CSDE1-204ENST00000369530 GLB1LQ6UWU2 654 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 LONP2Q86WA8 852 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 PTCD2Q8WV60 388 aaKnown RBP7.08□□□□□ -1.28
CSDE1-204ENST00000369530 STARD8Q92502 1023 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 EGLN2Q96KS0 407 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 PRICKLE1Q96MT3 831 aaPredicted RBP7.08□□□□□ -1.28
CSDE1-204ENST00000369530 RPP25Q9BUL9 199 aaKnown RBP7.08□□□□□ -1.28
CSDE1-204ENST00000369530 B3GNT5Q9BYG0 378 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 HEY1Q9Y5J3 304 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 INSL5Q9Y5Q6 135 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 MYBPHLA2RUH7 354 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 BEST1O76090 585 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 PAFAH1B1P43034 410 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 SLC7A9P82251 487 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 HSPA14Q0VDF9 509 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 CNGA2Q16280 664 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 ZNF423Q2M1K9 1284 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 ARL13BQ3SXY8 428 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 FAM209AQ5JX71 171 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 KLHL35Q6PF15 583 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 TREML1Q86YW5 311 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 MAP7D3Q8IWC1 876 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 ITFG1Q8TB96 612 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 SCG3Q8WXD2 468 aaKnown RBP7.08□□□□□ -1.28
CSDE1-204ENST00000369530 GAS2L1Q99501 681 aaPredicted RBP7.08□□□□□ -1.28
CSDE1-204ENST00000369530 KRT82Q9NSB4 513 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 ARHGEF38Q9NXL2 777 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 MARK1Q9P0L2 795 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 NOVA2Q9UNW9 492 aaKnown RBP7.08□□□□□ -1.28
CSDE1-204ENST00000369530 LOC105371267A0A1B0GV96 52 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 BTNL10A8MVZ5 291 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 I6L893 689 aaPredicted RBP7.08□□□□□ -1.28
CSDE1-204ENST00000369530 MATR3P43243 847 aaKnown RBP eCLIP7.08□□□□□ -1.28
CSDE1-204ENST00000369530 SEPT6Q14141 434 aa7.08□□□□□ -1.28
CSDE1-204ENST00000369530 LRRC74BQ6ZQY2 392 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms