RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 SMAD3P84022 425 aaKnown RBP24.55■■□□□ 1.52
SNX3-203ENST00000368979 DENND1CQ8IV53 801 aa24.55■■□□□ 1.52
SNX3-203ENST00000368979 MAB21L3Q8N8X9 362 aa24.55■■□□□ 1.52
SNX3-203ENST00000368979 LEMD2Q8NC56 503 aa24.55■■□□□ 1.52
SNX3-203ENST00000368979 SHKBP1Q8TBC3 707 aa24.55■■□□□ 1.52
SNX3-203ENST00000368979 ADAMTS19Q8TE59 1207 aa24.55■■□□□ 1.52
SNX3-203ENST00000368979 MYEOVQ96EZ4 313 aa24.55■■□□□ 1.52
SNX3-203ENST00000368979 CELF6Q96J87 481 aaKnown RBP24.55■■□□□ 1.52
SNX3-203ENST00000368979 NDFIP2Q9NV92 336 aa24.55■■□□□ 1.52
SNX3-203ENST00000368979 PAK5Q9P286 719 aa24.55■■□□□ 1.52
SNX3-203ENST00000368979 MTRF1LQ9UGC7 380 aaKnown RBP24.55■■□□□ 1.52
SNX3-203ENST00000368979 ANAPC5Q9UJX4 755 aa24.55■■□□□ 1.52
SNX3-203ENST00000368979 TPX2Q9ULW0 747 aaKnown RBP24.55■■□□□ 1.52
SNX3-203ENST00000368979 CPQQ9Y646 472 aa24.55■■□□□ 1.52
SNX3-203ENST00000368979 C5orf60A6NFR6 353 aa24.54■■□□□ 1.52
SNX3-203ENST00000368979 F5H5T6 163 aa24.54■■□□□ 1.52
SNX3-203ENST00000368979 NDC80O14777 642 aa24.54■■□□□ 1.52
SNX3-203ENST00000368979 MOSPD3O75425 235 aa24.54■■□□□ 1.52
SNX3-203ENST00000368979 GCATO75600 419 aa24.54■■□□□ 1.52
SNX3-203ENST00000368979 LATS1O95835 1130 aa24.54■■□□□ 1.52
SNX3-203ENST00000368979 RHOP08100 348 aa24.54■■□□□ 1.52
SNX3-203ENST00000368979 GARSP41250 739 aaKnown RBP24.54■■□□□ 1.52
SNX3-203ENST00000368979 ZXDBP98169 803 aa24.54■■□□□ 1.52
SNX3-203ENST00000368979 AP1B1Q10567 949 aa24.54■■□□□ 1.52
SNX3-203ENST00000368979 ALFQ53S48 1182 aa24.54■■□□□ 1.52
SNX3-203ENST00000368979 STXBP5Q5T5C0 1151 aa24.54■■□□□ 1.52
SNX3-203ENST00000368979 RNASEH2BQ5TBB1 312 aaKnown RBP24.54■■□□□ 1.52
SNX3-203ENST00000368979 ELMSAN1Q6PJG2 1045 aa24.54■■□□□ 1.52
SNX3-203ENST00000368979 MREGQ8N565 214 aa24.54■■□□□ 1.52
SNX3-203ENST00000368979 P2RY11Q96G91 374 aa24.54■■□□□ 1.52
SNX3-203ENST00000368979 RPRD1AQ96P16 312 aaPredicted RBP24.54■■□□□ 1.52
SNX3-203ENST00000368979 PRKD2Q9BZL6 878 aa24.54■■□□□ 1.52
SNX3-203ENST00000368979 TLE6Q9H808 572 aa24.54■■□□□ 1.52
SNX3-203ENST00000368979 ZNF212Q9UDV6 495 aa24.54■■□□□ 1.52
SNX3-203ENST00000368979 STOML2Q9UJZ1 356 aa24.54■■□□□ 1.52
SNX3-203ENST00000368979 AGO1Q9UL18 857 aaKnown RBP24.54■■□□□ 1.52
SNX3-203ENST00000368979 DOCK4Q8N1I0 1966 aa24.54■■□□□ 1.52
SNX3-203ENST00000368979 TRAV19A0A0A6YYK7 116 aa24.53■■□□□ 1.52
SNX3-203ENST00000368979 ATP8B1O43520 1251 aa24.53■■□□□ 1.52
SNX3-203ENST00000368979 GREM1O60565 184 aa24.53■■□□□ 1.52
SNX3-203ENST00000368979 CNTN5O94779 1100 aa24.53■■□□□ 1.52
SNX3-203ENST00000368979 PAPLNO95428 1278 aa24.53■■□□□ 1.52
SNX3-203ENST00000368979 CASP8Q14790 479 aa24.53■■□□□ 1.52
SNX3-203ENST00000368979 HDXQ7Z353 690 aa24.53■■□□□ 1.52
SNX3-203ENST00000368979 LGI2Q8N0V4 545 aa24.53■■□□□ 1.52
SNX3-203ENST00000368979 CCNYQ8ND76 341 aa24.53■■□□□ 1.52
SNX3-203ENST00000368979 ZNF707Q96C28 371 aaPredicted RBP24.53■■□□□ 1.52
SNX3-203ENST00000368979 DONSONQ9NYP3 566 aa24.53■■□□□ 1.52
SNX3-203ENST00000368979 FARP1Q9Y4F1 1045 aaPredicted RBP24.53■■□□□ 1.52
SNX3-203ENST00000368979 MAP2K7O14733 419 aa24.52■■□□□ 1.52
SNX3-203ENST00000368979 SASH3O75995 380 aa24.52■■□□□ 1.52
SNX3-203ENST00000368979 DDX6P26196 483 aaKnown RBP eCLIP24.52■■□□□ 1.52
SNX3-203ENST00000368979 ACTN2P35609 894 aa24.52■■□□□ 1.52
SNX3-203ENST00000368979 NRIP1P48552 1158 aa24.52■■□□□ 1.52
SNX3-203ENST00000368979 ZNF33AQ06730 810 aa24.52■■□□□ 1.52
SNX3-203ENST00000368979 KCNC3Q14003 757 aa24.52■■□□□ 1.52
SNX3-203ENST00000368979 C4orf22Q6V702 233 aa24.52■■□□□ 1.52
SNX3-203ENST00000368979 PCGF5Q86SE9 256 aa24.52■■□□□ 1.52
SNX3-203ENST00000368979 UMODL1-AS1Q8N2C9 162 aa24.52■■□□□ 1.52
SNX3-203ENST00000368979 TCEAL4Q96EI5 215 aa24.52■■□□□ 1.52
SNX3-203ENST00000368979 SLC46A2Q9BY10 475 aa24.52■■□□□ 1.52
SNX3-203ENST00000368979 TXLNGYQ9BZA5 131 aa24.52■■□□□ 1.52
SNX3-203ENST00000368979 SLC39A8Q9C0K1 460 aa24.52■■□□□ 1.52
SNX3-203ENST00000368979 CHD7Q9P2D1 2997 aa24.52■■□□□ 1.52
SNX3-203ENST00000368979 HELZP42694 1942 aaKnown RBP24.51■■□□□ 1.51
SNX3-203ENST00000368979 CKMP06732 381 aa24.51■■□□□ 1.51
SNX3-203ENST00000368979 HSPA9P38646 679 aaKnown RBP24.51■■□□□ 1.51
SNX3-203ENST00000368979 MORF4L2Q15014 288 aa24.51■■□□□ 1.51
SNX3-203ENST00000368979 PRSS36Q5K4E3 855 aa24.51■■□□□ 1.51
SNX3-203ENST00000368979 ADGRF1Q5T601 910 aa24.51■■□□□ 1.51
SNX3-203ENST00000368979 ZNF697Q5TEC3 545 aa24.51■■□□□ 1.51
SNX3-203ENST00000368979 Q6ZNB5 142 aa24.51■■□□□ 1.51
SNX3-203ENST00000368979 TMC3Q7Z5M5 1100 aa24.51■■□□□ 1.51
SNX3-203ENST00000368979 TFAP2DQ7Z6R9 452 aa24.51■■□□□ 1.51
SNX3-203ENST00000368979 CCDC110Q8TBZ0 833 aa24.51■■□□□ 1.51
SNX3-203ENST00000368979 CPT1BQ92523 772 aa24.51■■□□□ 1.51
SNX3-203ENST00000368979 TIFAQ96CG3 184 aa24.51■■□□□ 1.51
SNX3-203ENST00000368979 PRICKLE1Q96MT3 831 aaPredicted RBP24.51■■□□□ 1.51
SNX3-203ENST00000368979 FERMT1Q9BQL6 677 aa24.51■■□□□ 1.51
SNX3-203ENST00000368979 RETREG1Q9H6L5 497 aa24.51■■□□□ 1.51
SNX3-203ENST00000368979 NOL6Q9H6R4 1146 aaKnown RBP24.51■■□□□ 1.51
SNX3-203ENST00000368979 SHOC2Q9UQ13 582 aa24.51■■□□□ 1.51
SNX3-203ENST00000368979 A0A0A0MRY4 1105 aa24.51■■□□□ 1.51
SNX3-203ENST00000368979 CCDC195A0A1B0GUA6 201 aa24.51■■□□□ 1.51
SNX3-203ENST00000368979 NDST2P52849 883 aa24.51■■□□□ 1.51
SNX3-203ENST00000368979 WASHC5Q12768 1159 aa24.51■■□□□ 1.51
SNX3-203ENST00000368979 SLC5A9Q2M3M2 681 aa24.51■■□□□ 1.51
SNX3-203ENST00000368979 RFWD3Q6PCD5 774 aa24.51■■□□□ 1.51
SNX3-203ENST00000368979 SPATA13Q96N96 652 aa24.51■■□□□ 1.51
SNX3-203ENST00000368979 TSGA13Q96PP4 275 aa24.51■■□□□ 1.51
SNX3-203ENST00000368979 CDCA3Q99618 268 aaPredicted RBP24.51■■□□□ 1.51
SNX3-203ENST00000368979 NOTCH4Q99466 2003 aa24.5■■□□□ 1.51
SNX3-203ENST00000368979 NYNRINQ9P2P1 1898 aaKnown RBP24.5■■□□□ 1.51
SNX3-203ENST00000368979 SOBPA7XYQ1 873 aa24.5■■□□□ 1.51
SNX3-203ENST00000368979 RNF103O00237 685 aa24.5■■□□□ 1.51
SNX3-203ENST00000368979 DFFAO00273 331 aa24.5■■□□□ 1.51
SNX3-203ENST00000368979 PPFIA2O75334 1257 aa24.5■■□□□ 1.51
SNX3-203ENST00000368979 MAPKAPK2P49137 400 aa24.5■■□□□ 1.51
SNX3-203ENST00000368979 TEAD2Q15562 447 aa24.5■■□□□ 1.51
SNX3-203ENST00000368979 ANKRD20A2Q5SQ80 823 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms