RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 RHOBTB2Q9BYZ6 727 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 XPNPEP3Q9NQH7 507 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 CALB2P22676 271 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 MIIPQ5JXC2 388 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 SCIMPQ6UWF3 145 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 PCSK9Q8NBP7 692 aaKnown RBP18.51■□□□□ 0.55
SNX27-202ENST00000368841 NCKIPSDQ9NZQ3 722 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 ITGA11Q9UKX5 1188 aa18.51■□□□□ 0.55
SNX27-202ENST00000368841 RBAK-RBAKDNI3L0D1 243 aa18.5■□□□□ 0.55
SNX27-202ENST00000368841 PIAS1O75925 651 aa18.5■□□□□ 0.55
SNX27-202ENST00000368841 C1DQ13901 141 aaKnown RBP18.5■□□□□ 0.55
SNX27-202ENST00000368841 ITIH4Q14624 930 aa18.5■□□□□ 0.55
SNX27-202ENST00000368841 PKN2Q16513 984 aaKnown RBP18.5■□□□□ 0.55
SNX27-202ENST00000368841 Q4G0T1 1027 aa18.5■□□□□ 0.55
SNX27-202ENST00000368841 ERO1BQ86YB8 467 aa18.5■□□□□ 0.55
SNX27-202ENST00000368841 LPPQ93052 612 aa18.5■□□□□ 0.55
SNX27-202ENST00000368841 KIFC1Q9BW19 673 aa18.5■□□□□ 0.55
SNX27-202ENST00000368841 FBXO21O94952 628 aa18.5■□□□□ 0.55
SNX27-202ENST00000368841 FGRP09769 529 aa18.5■□□□□ 0.55
SNX27-202ENST00000368841 OR56A5P0C7T3 313 aa18.5■□□□□ 0.55
SNX27-202ENST00000368841 POLR2EP19388 210 aaKnown RBP18.5■□□□□ 0.55
SNX27-202ENST00000368841 FAM98BQ52LJ0 330 aaKnown RBP18.5■□□□□ 0.55
SNX27-202ENST00000368841 LPCAT2Q7L5N7 544 aa18.5■□□□□ 0.55
SNX27-202ENST00000368841 DNAJC1Q96KC8 554 aaKnown RBP18.5■□□□□ 0.55
SNX27-202ENST00000368841 FOXP3Q9BZS1 431 aa18.5■□□□□ 0.55
SNX27-202ENST00000368841 DCLK3Q9C098 648 aa18.5■□□□□ 0.55
SNX27-202ENST00000368841 ATXN2Q99700 1313 aaKnown RBP18.5■□□□□ 0.55
SNX27-202ENST00000368841 FFAR3O14843 346 aa18.5■□□□□ 0.55
SNX27-202ENST00000368841 GPR42O15529 346 aa18.5■□□□□ 0.55
SNX27-202ENST00000368841 RPL21P46778 160 aaKnown RBP18.5■□□□□ 0.55
SNX27-202ENST00000368841 BCL2L1Q07817 233 aa18.5■□□□□ 0.55
SNX27-202ENST00000368841 SLC25A24Q6NUK1 477 aa18.5■□□□□ 0.55
SNX27-202ENST00000368841 LRRC74BQ6ZQY2 392 aa18.5■□□□□ 0.55
SNX27-202ENST00000368841 SYT12Q8IV01 421 aa18.5■□□□□ 0.55
SNX27-202ENST00000368841 ZC3H7AQ8IWR0 971 aaKnown RBP18.5■□□□□ 0.55
SNX27-202ENST00000368841 SYTL5Q8TDW5 730 aaPredicted RBP18.5■□□□□ 0.55
SNX27-202ENST00000368841 ELMO1Q92556 727 aa18.5■□□□□ 0.55
SNX27-202ENST00000368841 SMARCD1Q96GM5 515 aa18.5■□□□□ 0.55
SNX27-202ENST00000368841 NOL6Q9H6R4 1146 aaKnown RBP18.5■□□□□ 0.55
SNX27-202ENST00000368841 TPP1O14773 563 aa18.5■□□□□ 0.55
SNX27-202ENST00000368841 PROSCO94903 275 aa18.5■□□□□ 0.55
SNX27-202ENST00000368841 FAM20CQ8IXL6 584 aa18.5■□□□□ 0.55
SNX27-202ENST00000368841 ACTL9Q8TC94 416 aa18.5■□□□□ 0.55
SNX27-202ENST00000368841 RTFDC1Q9BY42 306 aaPredicted RBP18.5■□□□□ 0.55
SNX27-202ENST00000368841 BARX2Q9UMQ3 279 aaPredicted RBP18.5■□□□□ 0.55
SNX27-202ENST00000368841 COX7A2P14406 83 aa18.5■□□□□ 0.55
SNX27-202ENST00000368841 RAP1GAP2Q684P5 730 aa18.5■□□□□ 0.55
SNX27-202ENST00000368841 TCF7L2Q9NQB0 619 aa18.5■□□□□ 0.55
SNX27-202ENST00000368841 NDUFAF1Q9Y375 327 aa18.5■□□□□ 0.55
SNX27-202ENST00000368841 NDUFS2O75306 463 aa18.5■□□□□ 0.55
SNX27-202ENST00000368841 F9P00740 461 aa18.5■□□□□ 0.55
SNX27-202ENST00000368841 NTRK1P04629 796 aa18.5■□□□□ 0.55
SNX27-202ENST00000368841 POLD2P49005 469 aa18.5■□□□□ 0.55
SNX27-202ENST00000368841 SRP54P61011 504 aaKnown RBP18.5■□□□□ 0.55
SNX27-202ENST00000368841 GRTP1Q5TC63 336 aa18.5■□□□□ 0.55
SNX27-202ENST00000368841 C2orf73Q8N5S3 287 aaPredicted RBP18.5■□□□□ 0.55
SNX27-202ENST00000368841 NARS2Q96I59 477 aaKnown RBP18.5■□□□□ 0.55
SNX27-202ENST00000368841 CASZ1Q86V15 1759 aa18.49■□□□□ 0.55
SNX27-202ENST00000368841 TBC1D3BA6NDS4 549 aa18.49■□□□□ 0.55
SNX27-202ENST00000368841 SLC26A4O43511 780 aa18.49■□□□□ 0.55
SNX27-202ENST00000368841 FAM153BP0C7A2 387 aa18.49■□□□□ 0.55
SNX27-202ENST00000368841 GPR15P49685 360 aa18.49■□□□□ 0.55
SNX27-202ENST00000368841 C15orf59Q2T9L4 293 aaPredicted RBP18.49■□□□□ 0.55
SNX27-202ENST00000368841 FAM153CQ494X1 144 aa18.49■□□□□ 0.55
SNX27-202ENST00000368841 KCTD21Q4G0X4 260 aa18.49■□□□□ 0.55
SNX27-202ENST00000368841 TUBGCP4Q9UGJ1 667 aa18.49■□□□□ 0.55
SNX27-202ENST00000368841 INO80Q9ULG1 1556 aaPredicted RBP18.49■□□□□ 0.55
SNX27-202ENST00000368841 HOXA2O43364 376 aa18.49■□□□□ 0.55
SNX27-202ENST00000368841 GAS2O43903 313 aaKnown RBP18.49■□□□□ 0.55
SNX27-202ENST00000368841 IFNA14P01570 189 aa18.49■□□□□ 0.55
SNX27-202ENST00000368841 ABL2P42684 1182 aa18.49■□□□□ 0.55
SNX27-202ENST00000368841 SV2AQ7L0J3 742 aa18.49■□□□□ 0.55
SNX27-202ENST00000368841 SLC22A9Q8IVM8 553 aa18.49■□□□□ 0.55
SNX27-202ENST00000368841 SLC27A5Q9Y2P5 690 aa18.49■□□□□ 0.55
SNX27-202ENST00000368841 RIPK2O43353 540 aa18.49■□□□□ 0.55
SNX27-202ENST00000368841 SERPINF2P08697 491 aa18.49■□□□□ 0.55
SNX27-202ENST00000368841 PTSQ03393 145 aa18.49■□□□□ 0.55
SNX27-202ENST00000368841 DENND1CQ8IV53 801 aa18.49■□□□□ 0.55
SNX27-202ENST00000368841 LRRN4CLQ8ND94 238 aa18.49■□□□□ 0.55
SNX27-202ENST00000368841 METTL6Q8TCB7 284 aa18.49■□□□□ 0.55
SNX27-202ENST00000368841 HTR3CQ8WXA8 447 aa18.49■□□□□ 0.55
SNX27-202ENST00000368841 DNPEPQ9ULA0 475 aa18.49■□□□□ 0.55
SNX27-202ENST00000368841 NCKAP1Q9Y2A7 1128 aa18.49■□□□□ 0.55
SNX27-202ENST00000368841 ABCA6Q8N139 1617 aa18.49■□□□□ 0.55
SNX27-202ENST00000368841 SMAPO00193 183 aa18.49■□□□□ 0.55
SNX27-202ENST00000368841 SFSWAPQ12872 951 aaKnown RBP18.49■□□□□ 0.55
SNX27-202ENST00000368841 MCOLN2Q8IZK6 566 aa18.49■□□□□ 0.55
SNX27-202ENST00000368841 POLR1BQ9H9Y6 1135 aa18.49■□□□□ 0.55
SNX27-202ENST00000368841 FBXO6Q9NRD1 293 aaPredicted RBP18.49■□□□□ 0.55
SNX27-202ENST00000368841 MAT2BQ9NZL9 334 aa18.49■□□□□ 0.55
SNX27-202ENST00000368841 HES2Q9Y543 173 aa18.49■□□□□ 0.55
SNX27-202ENST00000368841 AP4S1Q9Y587 144 aa18.49■□□□□ 0.55
SNX27-202ENST00000368841 AMHP03971 560 aa18.49■□□□□ 0.55
SNX27-202ENST00000368841 DGCR6Q14129 220 aa18.49■□□□□ 0.55
SNX27-202ENST00000368841 ARMC4Q5T2S8 1044 aa18.49■□□□□ 0.55
SNX27-202ENST00000368841 TMC5Q6UXY8 1006 aa18.49■□□□□ 0.55
SNX27-202ENST00000368841 ALG9Q9H6U8 611 aa18.49■□□□□ 0.55
SNX27-202ENST00000368841 KLHL3Q9UH77 587 aa18.49■□□□□ 0.55
SNX27-202ENST00000368841 SMIM31A0A1B0GVY4 71 aa18.48■□□□□ 0.55
SNX27-202ENST00000368841 CLPTM1O96005 669 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms