RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 KRT82Q9NSB4 513 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 NDUFA13Q9P0J0 144 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 XPO7Q9UIA9 1087 aaKnown RBP11.86□□□□□ -0.51
USF1-201ENST00000368019 DCTN4Q9UJW0 460 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 TBC1D30Q9Y2I9 924 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 PLLPQ9Y342 182 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 DENND4AQ7Z401 1863 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 ZFHX2Q9C0A1 2572 aaPredicted RBP11.86□□□□□ -0.51
USF1-201ENST00000368019 TCRBV9S1A1TA0A576 114 aa11.85□□□□□ -0.51
USF1-201ENST00000368019 TMEM150BA6NC51 233 aa11.85□□□□□ -0.51
USF1-201ENST00000368019 F8VP50 259 aa11.85□□□□□ -0.51
USF1-201ENST00000368019 CST8O60676 142 aa11.85□□□□□ -0.51
USF1-201ENST00000368019 CLASP2O75122 1294 aaKnown RBP11.85□□□□□ -0.51
USF1-201ENST00000368019 SNNO75324 88 aaPredicted RBP11.85□□□□□ -0.51
USF1-201ENST00000368019 CFHP08603 1231 aa11.85□□□□□ -0.51
USF1-201ENST00000368019 ANPEPP15144 967 aa11.85□□□□□ -0.51
USF1-201ENST00000368019 AOC1P19801 751 aa11.85□□□□□ -0.51
USF1-201ENST00000368019 PSMA2P25787 234 aa11.85□□□□□ -0.51
USF1-201ENST00000368019 RFC5P40937 340 aa11.85□□□□□ -0.51
USF1-201ENST00000368019 PTPN5P54829 565 aa11.85□□□□□ -0.51
USF1-201ENST00000368019 EIF3EP60228 445 aaKnown RBP11.85□□□□□ -0.51
USF1-201ENST00000368019 CDC42EP1Q00587 391 aa11.85□□□□□ -0.51
USF1-201ENST00000368019 DSG1Q02413 1049 aa11.85□□□□□ -0.51
USF1-201ENST00000368019 DPYSL3Q14195 570 aa11.85□□□□□ -0.51
USF1-201ENST00000368019 EMC2Q15006 297 aa11.85□□□□□ -0.51
USF1-201ENST00000368019 BBS9Q3SYG4 887 aa11.85□□□□□ -0.51
USF1-201ENST00000368019 MSS51Q4VC12 460 aa11.85□□□□□ -0.51
USF1-201ENST00000368019 TEX44Q53QW1 395 aa11.85□□□□□ -0.51
USF1-201ENST00000368019 SPOPLQ6IQ16 392 aa11.85□□□□□ -0.51
USF1-201ENST00000368019 ACAD11Q709F0 780 aa11.85□□□□□ -0.51
USF1-201ENST00000368019 ZC3H18Q86VM9 953 aaKnown RBP11.85□□□□□ -0.51
USF1-201ENST00000368019 MCUQ8NE86 351 aa11.85□□□□□ -0.51
USF1-201ENST00000368019 ACMSDQ8TDX5 336 aa11.85□□□□□ -0.51
USF1-201ENST00000368019 WDR60Q8WVS4 1066 aa11.85□□□□□ -0.51
USF1-201ENST00000368019 CASP10Q92851 521 aa11.85□□□□□ -0.51
USF1-201ENST00000368019 E2F7Q96AV8 911 aa11.85□□□□□ -0.51
USF1-201ENST00000368019 GBP5Q96PP8 586 aa11.85□□□□□ -0.51
USF1-201ENST00000368019 MSTO1Q9BUK6 570 aa11.85□□□□□ -0.51
USF1-201ENST00000368019 APOL5Q9BWW9 433 aa11.85□□□□□ -0.51
USF1-201ENST00000368019 CHST12Q9NRB3 414 aa11.85□□□□□ -0.51
USF1-201ENST00000368019 NDE1Q9NXR1 346 aa11.85□□□□□ -0.51
USF1-201ENST00000368019 CDH22Q9UJ99 828 aa11.85□□□□□ -0.51
USF1-201ENST00000368019 HCFC2Q9Y5Z7 792 aa11.85□□□□□ -0.51
USF1-201ENST00000368019 PTPRJQ12913 1337 aa11.85□□□□□ -0.51
USF1-201ENST00000368019 B2RBV5 119 aa11.84□□□□□ -0.51
USF1-201ENST00000368019 ZNF623O75123 536 aa11.84□□□□□ -0.51
USF1-201ENST00000368019 LRCH4O75427 683 aa11.84□□□□□ -0.51
USF1-201ENST00000368019 KRT38O76015 456 aa11.84□□□□□ -0.51
USF1-201ENST00000368019 KLHL2O95198 593 aa11.84□□□□□ -0.51
USF1-201ENST00000368019 CALCAP01258 141 aa11.84□□□□□ -0.51
USF1-201ENST00000368019 TCF4P15884 667 aa11.84□□□□□ -0.51
USF1-201ENST00000368019 BGNP21810 368 aa11.84□□□□□ -0.51
USF1-201ENST00000368019 PRDX6P30041 224 aa11.84□□□□□ -0.51
USF1-201ENST00000368019 AVPR2P30518 371 aa11.84□□□□□ -0.51
USF1-201ENST00000368019 ELK3P41970 407 aa11.84□□□□□ -0.51
USF1-201ENST00000368019 PHKA2P46019 1235 aa11.84□□□□□ -0.51
USF1-201ENST00000368019 BCAR1P56945 870 aa11.84□□□□□ -0.51
USF1-201ENST00000368019 NAB1Q13506 487 aa11.84□□□□□ -0.51
USF1-201ENST00000368019 THOC5Q13769 683 aaKnown RBP11.84□□□□□ -0.51
USF1-201ENST00000368019 SLC5A9Q2M3M2 681 aa11.84□□□□□ -0.51
USF1-201ENST00000368019 C2CD6Q53TS8 623 aa11.84□□□□□ -0.51
USF1-201ENST00000368019 THEMIS2Q5TEJ8 643 aa11.84□□□□□ -0.51
USF1-201ENST00000368019 TMEM173Q86WV6 379 aaPredicted RBP11.84□□□□□ -0.51
USF1-201ENST00000368019 CRLF3Q8IUI8 442 aa11.84□□□□□ -0.51
USF1-201ENST00000368019 RNF169Q8NCN4 708 aa11.84□□□□□ -0.51
USF1-201ENST00000368019 STKLD1Q8NE28 680 aa11.84□□□□□ -0.51
USF1-201ENST00000368019 DEPTORQ8TB45 409 aa11.84□□□□□ -0.51
USF1-201ENST00000368019 NLRP7Q8WX94 980 aa11.84□□□□□ -0.51
USF1-201ENST00000368019 RSPH1Q8WYR4 309 aa11.84□□□□□ -0.51
USF1-201ENST00000368019 SERAC1Q96JX3 654 aa11.84□□□□□ -0.51
USF1-201ENST00000368019 FAM111AQ96PZ2 611 aa11.84□□□□□ -0.51
USF1-201ENST00000368019 SRPK1Q96SB4 655 aaKnown RBP11.84□□□□□ -0.51
USF1-201ENST00000368019 ECSITQ9BQ95 431 aa11.84□□□□□ -0.51
USF1-201ENST00000368019 CENPKQ9BS16 269 aa11.84□□□□□ -0.51
USF1-201ENST00000368019 CCDC106Q9BWC9 280 aa11.84□□□□□ -0.51
USF1-201ENST00000368019 MRPL9Q9BYD2 267 aaKnown RBP11.84□□□□□ -0.51
USF1-201ENST00000368019 GCOM2Q9BZD3 368 aaPredicted RBP11.84□□□□□ -0.51
USF1-201ENST00000368019 MIS12Q9H081 205 aa11.84□□□□□ -0.51
USF1-201ENST00000368019 KLHL11Q9NVR0 708 aa11.84□□□□□ -0.51
USF1-201ENST00000368019 SEPT9Q9UHD8 586 aaPredicted RBP11.84□□□□□ -0.51
USF1-201ENST00000368019 TTLL3Q9Y4R7 772 aa11.84□□□□□ -0.51
USF1-201ENST00000368019 IRAK3Q9Y616 596 aa11.84□□□□□ -0.51
USF1-201ENST00000368019 C2orf16Q68DN1 1984 aa11.84□□□□□ -0.51
USF1-201ENST00000368019 ANK1P16157 1881 aa11.84□□□□□ -0.51
USF1-201ENST00000368019 PLXNA3P51805 1871 aa11.84□□□□□ -0.51
USF1-201ENST00000368019 VPS13AQ96RL7 3174 aa11.84□□□□□ -0.51
USF1-201ENST00000368019 RIF1Q5UIP0 2472 aaKnown RBP11.83□□□□□ -0.52
USF1-201ENST00000368019 A0A087WZ62 844 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 WDR91A4D1P6 747 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 NT5C1B-RDH14C9J2C7 533 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 K7ERI5 159 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 AP1G1O43747 822 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 CCNT2O60583 730 aaKnown RBP11.83□□□□□ -0.52
USF1-201ENST00000368019 MAFO75444 373 aaPredicted RBP11.83□□□□□ -0.52
USF1-201ENST00000368019 CXCL14O95715 111 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 LYNP07948 512 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 RBP3P10745 1247 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 KRT3P12035 628 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 TGM2P21980 687 aa11.83□□□□□ -0.52
USF1-201ENST00000368019 CRHR1P34998 444 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms