RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 REEP2Q9BRK0 252 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 SLC40A1Q9NP59 571 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 PCMTD2Q9NV79 361 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 NID2Q14112 1375 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 PLS3P13797 630 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 GSTT1P30711 240 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 SEC24CP53992 1094 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 CXCR4P61073 352 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 C2orf54Q08AI8 447 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 ZNF181Q2M3W8 571 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 DPP10Q8N608 796 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 EMILIN2Q9BXX0 1053 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 MAGEL2Q9UJ55 1249 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 MOSPD1Q9UJG1 213 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 SLC13A4Q9UKG4 626 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 NOVA2Q9UNW9 492 aaKnown RBP3.83□□□□□ -1.8
SYNE1-207ENST00000367255 POC1B-GALNT4F8VUJ3 575 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 MYCLP12524 364 aaPredicted RBP3.83□□□□□ -1.8
SYNE1-207ENST00000367255 CTBP2P56545 445 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 ATP2C1P98194 919 aaPredicted RBP3.83□□□□□ -1.8
SYNE1-207ENST00000367255 PON3Q15166 354 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 HACD2Q6Y1H2 254 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 EXT2Q93063 718 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 RFKQ969G6 155 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 PGBD1Q96JS3 809 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 MTFR1LQ9H019 292 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 DDX6P26196 483 aaKnown RBP eCLIP3.83□□□□□ -1.8
SYNE1-207ENST00000367255 RPL10AP62906 217 aaKnown RBP3.83□□□□□ -1.8
SYNE1-207ENST00000367255 TMEM74Q96NL1 305 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 ARHGEF3Q9NR81 526 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 GSTK1Q9Y2Q3 226 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 GRID2O43424 1007 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 NPHS1O60500 1241 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 KPNA6O60684 536 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 MTA2O94776 668 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 BCL10O95999 233 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 ATP4AP20648 1035 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 TAGLN2P37802 199 aaKnown RBP3.83□□□□□ -1.8
SYNE1-207ENST00000367255 ADGRF2Q8IZF7 708 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 REPS2Q8NFH8 660 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 PGAP3Q96FM1 320 aaPredicted RBP3.83□□□□□ -1.8
SYNE1-207ENST00000367255 LRWD1Q9UFC0 647 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 STAU1O95793 577 aaKnown RBP3.83□□□□□ -1.8
SYNE1-207ENST00000367255 CACNB1Q02641 598 aaPredicted RBP3.83□□□□□ -1.8
SYNE1-207ENST00000367255 CKAP2Q8WWK9 683 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 SEC16BQ96JE7 1060 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 HPF1Q9NWY4 346 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 ZNF232Q9UNY5 417 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 GDAQ9Y2T3 454 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 FAM32AQ9Y421 112 aaKnown RBP3.83□□□□□ -1.8
SYNE1-207ENST00000367255 ARIH1Q9Y4X5 557 aaPredicted RBP3.83□□□□□ -1.8
SYNE1-207ENST00000367255 IYDQ6PHW0 289 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 OR5T1Q8NG75 326 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 CNTNAP4Q9C0A0 1308 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 COQ9O75208 318 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 SULT1C4O75897 302 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 IPO13O94829 963 aaKnown RBP3.83□□□□□ -1.8
SYNE1-207ENST00000367255 POLBP06746 335 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 ETS2P15036 469 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 NKX2-3Q8TAU0 364 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 HAPLN3Q96S86 360 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 MANSC1Q9H8J5 431 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 ZSWIM5Q9P217 1185 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 PDZK1P1A8MUH7 402 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 FCHO1O14526 889 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 OAZ2O95190 189 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 ATE1O95260 518 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 PCID2Q5JVF3 399 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 ZDHHC13Q8IUH4 622 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 SPATA16Q9BXB7 569 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 INTS13Q9NVM9 706 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 TEX33O43247 280 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 FAM155BO75949 473 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 RBL1P28749 1068 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 EHHADHQ08426 723 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 FAM98BQ52LJ0 330 aaKnown RBP3.83□□□□□ -1.8
SYNE1-207ENST00000367255 CYP4Z2PQ8N1L4 340 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 CARNMT1Q8N4J0 409 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 CLPBQ9H078 707 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 TMEM138Q9NPI0 162 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 PCDHGB5Q9Y5G0 923 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 UMODL1Q5DID0 1318 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 TP73O15350 636 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 NCR1O76036 304 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 ANP32DO95626 131 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 NPR2P20594 1047 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 CDC42P60953 191 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 TTC33Q6PID6 262 aaPredicted RBP3.83□□□□□ -1.8
SYNE1-207ENST00000367255 LMBR1LQ6UX01 489 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 PID1Q7Z2X4 250 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 RETREG3Q86VR2 466 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 MIB1Q86YT6 1006 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 ACTRT2Q8TDY3 377 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 GTF2IRD1Q9UHL9 959 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 TSR3Q9UJK0 312 aaKnown RBP3.83□□□□□ -1.8
SYNE1-207ENST00000367255 NPHP3-ACAD11A0A0J9YXS1 232 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 BMT2Q1RMZ1 405 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 MB21D1Q8N884 522 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 CASKIN2Q8WXE0 1202 aa3.83□□□□□ -1.8
SYNE1-207ENST00000367255 GAL3ST1Q99999 423 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms