RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 DENND1CQ8IV53 801 aa8.47□□□□□ -1.05
YBX3-204ENST00000366290 CAMKK1Q8N5S9 505 aa8.47□□□□□ -1.05
YBX3-204ENST00000366290 PPP1R35Q8TAP8 253 aa8.47□□□□□ -1.05
YBX3-204ENST00000366290 KCNG4Q8TDN1 519 aa8.47□□□□□ -1.05
YBX3-204ENST00000366290 GDPD5Q8WTR4 605 aa8.47□□□□□ -1.05
YBX3-204ENST00000366290 TCP11Q8WWU5 503 aa8.47□□□□□ -1.05
YBX3-204ENST00000366290 RABGGTAQ92696 567 aa8.47□□□□□ -1.05
YBX3-204ENST00000366290 RAB24Q969Q5 203 aa8.47□□□□□ -1.05
YBX3-204ENST00000366290 MRPL38Q96DV4 380 aaKnown RBP8.47□□□□□ -1.05
YBX3-204ENST00000366290 EPSTI1Q96J88 318 aa8.47□□□□□ -1.05
YBX3-204ENST00000366290 AK8Q96MA6 479 aa8.47□□□□□ -1.05
YBX3-204ENST00000366290 FAM193BQ96PV7 902 aaPredicted RBP8.47□□□□□ -1.05
YBX3-204ENST00000366290 GPHA2Q96T91 129 aa8.47□□□□□ -1.05
YBX3-204ENST00000366290 LRFN3Q9BTN0 628 aa8.47□□□□□ -1.05
YBX3-204ENST00000366290 CCSER1Q9C0I3 900 aa8.47□□□□□ -1.05
YBX3-204ENST00000366290 LMAN2LQ9H0V9 348 aa8.47□□□□□ -1.05
YBX3-204ENST00000366290 TDP1Q9NUW8 608 aa8.47□□□□□ -1.05
YBX3-204ENST00000366290 DACT1Q9NYF0 836 aa8.47□□□□□ -1.05
YBX3-204ENST00000366290 LRWD1Q9UFC0 647 aa8.47□□□□□ -1.05
YBX3-204ENST00000366290 PUF60Q9UHX1 559 aaKnown RBP8.47□□□□□ -1.05
YBX3-204ENST00000366290 MTUS1Q9ULD2 1270 aa8.47□□□□□ -1.05
YBX3-204ENST00000366290 MYH11P35749 1972 aa8.47□□□□□ -1.05
YBX3-204ENST00000366290 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.46□□□□□ -1.06
YBX3-204ENST00000366290 H3BML4 177 aa8.46□□□□□ -1.06
YBX3-204ENST00000366290 ALDH2P05091 517 aa8.46□□□□□ -1.06
YBX3-204ENST00000366290 KRT18P05783 430 aaKnown RBP8.46□□□□□ -1.06
YBX3-204ENST00000366290 ATF7P17544 494 aaPredicted RBP8.46□□□□□ -1.06
YBX3-204ENST00000366290 HOXA11P31270 313 aaPredicted RBP8.46□□□□□ -1.06
YBX3-204ENST00000366290 CCT6AP40227 531 aaKnown RBP8.46□□□□□ -1.06
YBX3-204ENST00000366290 PTENP60484 403 aa8.46□□□□□ -1.06
YBX3-204ENST00000366290 GPM6BQ13491 265 aa8.46□□□□□ -1.06
YBX3-204ENST00000366290 TMEM119Q4V9L6 283 aa8.46□□□□□ -1.06
YBX3-204ENST00000366290 HAUS3Q68CZ6 603 aa8.46□□□□□ -1.06
YBX3-204ENST00000366290 TTLL10Q6ZVT0 673 aa8.46□□□□□ -1.06
YBX3-204ENST00000366290 TTC7BQ86TV6 843 aa8.46□□□□□ -1.06
YBX3-204ENST00000366290 ECHDC2Q86YB7 292 aa8.46□□□□□ -1.06
YBX3-204ENST00000366290 DRC7Q8IY82 874 aa8.46□□□□□ -1.06
YBX3-204ENST00000366290 LGI4Q8N135 537 aa8.46□□□□□ -1.06
YBX3-204ENST00000366290 MCPH1Q8NEM0 835 aa8.46□□□□□ -1.06
YBX3-204ENST00000366290 ERMNQ8TAM6 284 aa8.46□□□□□ -1.06
YBX3-204ENST00000366290 CCHCR1Q8TD31 782 aa8.46□□□□□ -1.06
YBX3-204ENST00000366290 TMEM143Q96AN5 459 aa8.46□□□□□ -1.06
YBX3-204ENST00000366290 SCLT1Q96NL6 688 aa8.46□□□□□ -1.06
YBX3-204ENST00000366290 RAB34Q9BZG1 259 aa8.46□□□□□ -1.06
YBX3-204ENST00000366290 SCAND2PQ9GZW5 306 aaPredicted RBP8.46□□□□□ -1.06
YBX3-204ENST00000366290 TMEM117Q9H0C3 514 aa8.46□□□□□ -1.06
YBX3-204ENST00000366290 LDAHQ9H6V9 325 aa8.46□□□□□ -1.06
YBX3-204ENST00000366290 ATP6V0A4Q9HBG4 840 aa8.46□□□□□ -1.06
YBX3-204ENST00000366290 AGPAT5Q9NUQ2 364 aa8.46□□□□□ -1.06
YBX3-204ENST00000366290 NCDNQ9UBB6 729 aa8.46□□□□□ -1.06
YBX3-204ENST00000366290 COG5Q9UP83 839 aa8.46□□□□□ -1.06
YBX3-204ENST00000366290 PLXNA4Q9HCM2 1894 aa8.45□□□□□ -1.06
YBX3-204ENST00000366290 TRIOO75962 3097 aa8.45□□□□□ -1.06
YBX3-204ENST00000366290 FAM237AA0A1B0GTK4 181 aa8.45□□□□□ -1.06
YBX3-204ENST00000366290 MATN2O00339 956 aa8.45□□□□□ -1.06
YBX3-204ENST00000366290 SLC26A4O43511 780 aa8.45□□□□□ -1.06
YBX3-204ENST00000366290 TRIM13O60858 407 aa8.45□□□□□ -1.06
YBX3-204ENST00000366290 CSDE1O75534 798 aaKnown RBP8.45□□□□□ -1.06
YBX3-204ENST00000366290 GLRA2P23416 452 aa8.45□□□□□ -1.06
YBX3-204ENST00000366290 CTNNB1P35222 781 aa8.45□□□□□ -1.06
YBX3-204ENST00000366290 CASRP41180 1078 aa8.45□□□□□ -1.06
YBX3-204ENST00000366290 ME1P48163 572 aa8.45□□□□□ -1.06
YBX3-204ENST00000366290 RAC3P60763 192 aa8.45□□□□□ -1.06
YBX3-204ENST00000366290 TARDBPQ13148 414 aaKnown RBP eCLIP8.45□□□□□ -1.06
YBX3-204ENST00000366290 CAMK1Q14012 370 aa8.45□□□□□ -1.06
YBX3-204ENST00000366290 KARSQ15046 597 aaKnown RBP8.45□□□□□ -1.06
YBX3-204ENST00000366290 RESP18Q5W5W9 173 aa8.45□□□□□ -1.06
YBX3-204ENST00000366290 ADALQ6DHV7 355 aa8.45□□□□□ -1.06
YBX3-204ENST00000366290 OVCH2Q7RTZ1 564 aa8.45□□□□□ -1.06
YBX3-204ENST00000366290 CMTM4Q8IZR5 234 aa8.45□□□□□ -1.06
YBX3-204ENST00000366290 SYT8Q8NBV8 401 aa8.45□□□□□ -1.06
YBX3-204ENST00000366290 RNF149Q8NC42 400 aa8.45□□□□□ -1.06
YBX3-204ENST00000366290 PIGOQ8TEQ8 1089 aa8.45□□□□□ -1.06
YBX3-204ENST00000366290 RGMAQ96B86 450 aa8.45□□□□□ -1.06
YBX3-204ENST00000366290 CYFIP2Q96F07 1278 aa8.45□□□□□ -1.06
YBX3-204ENST00000366290 ZNF668Q96K58 619 aaPredicted RBP8.45□□□□□ -1.06
YBX3-204ENST00000366290 NLRP4Q96MN2 994 aa8.45□□□□□ -1.06
YBX3-204ENST00000366290 CASD1Q96PB1 797 aa8.45□□□□□ -1.06
YBX3-204ENST00000366290 CWH43Q9H720 699 aa8.45□□□□□ -1.06
YBX3-204ENST00000366290 MINDY3Q9H8M7 445 aa8.45□□□□□ -1.06
YBX3-204ENST00000366290 LANCL2Q9NS86 450 aa8.45□□□□□ -1.06
YBX3-204ENST00000366290 BLOC1S4Q9NUP1 217 aa8.45□□□□□ -1.06
YBX3-204ENST00000366290 DDX19AQ9NUU7 478 aaKnown RBP8.45□□□□□ -1.06
YBX3-204ENST00000366290 WDFY4Q6ZS81 3184 aa8.45□□□□□ -1.06
YBX3-204ENST00000366290 C5orf42Q9H799 3197 aa8.45□□□□□ -1.06
YBX3-204ENST00000366290 TBKBP1A7MCY6 615 aa8.44□□□□□ -1.06
YBX3-204ENST00000366290 E9PMD0 336 aa8.44□□□□□ -1.06
YBX3-204ENST00000366290 INPPL1O15357 1258 aa8.44□□□□□ -1.06
YBX3-204ENST00000366290 NCK2O43639 380 aa8.44□□□□□ -1.06
YBX3-204ENST00000366290 UBXN7O94888 489 aa8.44□□□□□ -1.06
YBX3-204ENST00000366290 AMY1AP04745 511 aa8.44□□□□□ -1.06
YBX3-204ENST00000366290 ITGB1P05556 798 aa8.44□□□□□ -1.06
YBX3-204ENST00000366290 CYP11B2P19099 503 aa8.44□□□□□ -1.06
YBX3-204ENST00000366290 FGFR4P22455 802 aa8.44□□□□□ -1.06
YBX3-204ENST00000366290 AXLP30530 894 aa8.44□□□□□ -1.06
YBX3-204ENST00000366290 UBA7P41226 1012 aa8.44□□□□□ -1.06
YBX3-204ENST00000366290 GATMP50440 423 aa8.44□□□□□ -1.06
YBX3-204ENST00000366290 UBE3AQ05086 875 aa8.44□□□□□ -1.06
YBX3-204ENST00000366290 CAPSQ13938 189 aa8.44□□□□□ -1.06
YBX3-204ENST00000366290 TFDP1Q14186 410 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms