RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 MAMDC4Q6UXC1 1216 aa3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 RAPH1Q70E73 1250 aa3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 CHST3Q7LGC8 479 aa3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 DNAAF5Q86Y56 855 aa3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 P3H2Q8IVL5 708 aa3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 ARHGAP12Q8IWW6 846 aa3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 UNC45BQ8IWX7 931 aa3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 GPR135Q8IZ08 494 aa3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 CARNMT1Q8N4J0 409 aa3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 ZNF808Q8N4W9 903 aaPredicted RBP3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 SYT2Q8N9I0 419 aaPredicted RBP3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 Q8NA96 180 aa3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 FBXO15Q8NCQ5 510 aaPredicted RBP3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 MDGA1Q8NFP4 955 aa3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 GPR150Q8NGU9 434 aa3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 GDAP1Q8TB36 358 aa3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 PIGOQ8TEQ8 1089 aa3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 GLMPQ8WWB7 406 aa3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 PRPF31Q8WWY3 499 aaKnown RBP3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 RAB40AQ8WXH6 277 aa3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 ATG4AQ8WYN0 398 aa3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 SNX19Q92543 992 aa3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 CNOT9Q92600 299 aaKnown RBP3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 CCDC47Q96A33 483 aaKnown RBP3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 SLC22A18Q96BI1 424 aa3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 FAM136AQ96C01 138 aa3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 RMDN1Q96DB5 314 aa3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 MBD6Q96DN6 1003 aa3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 PGAP3Q96FM1 320 aaPredicted RBP3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 TRMT61AQ96FX7 289 aaKnown RBP3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 KLHL15Q96M94 604 aa3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 RAB3IPQ96QF0 476 aaPredicted RBP3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 MPHOSPH9Q99550 1183 aa3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 NPLQ9BXD5 320 aaPredicted RBP3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 KRTAP4-11Q9BYQ6 195 aa3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 KRTAP4-5Q9BYR2 181 aa3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 EPB41L4BQ9H329 900 aa3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 EPHX3Q9H6B9 360 aa3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 TRPV4Q9HBA0 871 aa3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 DECR2Q9NUI1 292 aa3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 SPATS2LQ9NUQ6 558 aaKnown RBP3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 IL1RAPL1Q9NZN1 696 aa3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 RNF181Q9P0P0 153 aa3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 MTMR6Q9Y217 621 aa3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 KNSTRNQ9Y448 316 aa3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 COPG1Q9Y678 874 aaKnown RBP3.96□□□□□ -1.78
RNU6-1249P-201ENST00000363237 AATKQ6ZMQ8 1374 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 CCDC187A0A096LP49 1063 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 MYADML2A6NDP7 307 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 A8MZ25 164 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 TAF4O00268 1085 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 SLU7O95391 586 aaKnown RBP3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 GGPS1O95749 300 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 ARSAP15289 507 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 ZNF37AP17032 561 aaPredicted RBP3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 CR2P20023 1033 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 FGFR4P22455 802 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 KRT2P35908 639 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 RPS19P39019 145 aaKnown RBP3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 PBX3P40426 434 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 NRIP1P48552 1158 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 TAS2R50P59544 299 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 NIPAL4Q0D2K0 466 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 DNASE1L3Q13609 305 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 BYSLQ13895 437 aaKnown RBP3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 GRM7Q14831 915 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 ADIPOQQ15848 244 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 LY6KQ17RY6 165 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 DPCR1Q3MIW9 517 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 C9orf152Q5JTZ5 239 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 ZNF648Q5T619 568 aaPredicted RBP3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 GRHL2Q6ISB3 625 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 TMEM81Q6P7N7 255 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 KIAA1324Q6UXG2 1013 aaKnown RBP3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 DENND5BQ6ZUT9 1274 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 DTX2Q86UW9 622 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 METTL23Q86XA0 190 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 SYT12Q8IV01 421 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 KBTBD2Q8IY47 623 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 ADGRG5Q8IZF4 528 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 NUP93Q8N1F7 819 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 TMCO5AQ8N6Q1 288 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 PLD5Q8N7P1 536 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 ENDOVQ8N8Q3 282 aaKnown RBP3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 C11orf65Q8NCR3 313 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 OR56A1Q8NGH5 318 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 OR52L2PQ8NGH6 319 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 ADAMTS17Q8TE56 1095 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 CLEC4CQ8WTT0 213 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 DEPDC1BQ8WUY9 529 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 KCNJ9Q92806 393 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 VPS33AQ96AX1 596 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 GBP5Q96PP8 586 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 GCNAQ96QF7 691 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 CLSTN3Q9BQT9 956 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 STRA6Q9BX79 667 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 SGPP1Q9BX95 441 aa3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 MRPL1Q9BYD6 325 aaKnown RBP3.95□□□□□ -1.78
RNU6-1249P-201ENST00000363237 AMBRA1Q9C0C7 1298 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms