RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 GIT1Q9Y2X7 761 aa6.2□□□□□ -1.42
VPS13B-203ENST00000358544 EFCAB10A6NFE3 127 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 SOAT2O75908 522 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 HSF2Q03933 536 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 DGKKQ5KSL6 1271 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 CCDC24Q8N4L8 307 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 ITFG1Q8TB96 612 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 SP110Q9HB58 689 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 ATPIF1Q9UII2 106 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 PACSIN3Q9UKS6 424 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 DHRS12A0PJE2 317 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 ILVBLA1L0T0 632 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 RGSL1A5PLK6 1076 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 E7ENX8 843 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 TFECO14948 347 aaPredicted RBP6.19□□□□□ -1.42
VPS13B-203ENST00000358544 COQ9O75208 318 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 MPOP05164 745 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 AZGP1P25311 298 aaKnown RBP6.19□□□□□ -1.42
VPS13B-203ENST00000358544 GLRBP48167 497 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 SLC1A5Q15758 541 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 CCDC28AQ8IWP9 274 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 MARK4Q96L34 752 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 ARIH2O95376 493 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 SLC9A3P48764 834 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 SEPHS1P49903 392 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 PGS1Q32NB8 556 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 ZIK1Q3SY52 487 aaPredicted RBP6.19□□□□□ -1.42
VPS13B-203ENST00000358544 POTEHQ6S545 545 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.19□□□□□ -1.42
VPS13B-203ENST00000358544 SLC22A9Q8IVM8 553 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 ALLCQ8N6M5 410 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 CCDC126Q96EE4 140 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 ZNF512BQ96KM6 892 aaPredicted RBP6.19□□□□□ -1.42
VPS13B-203ENST00000358544 APOL5Q9BWW9 433 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 SSNA1O43805 119 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 PDGFRAP16234 1089 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 SFNP31947 248 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 MAGEA10P43363 369 aaPredicted RBP6.19□□□□□ -1.42
VPS13B-203ENST00000358544 C1QBPQ07021 282 aaKnown RBP6.19□□□□□ -1.42
VPS13B-203ENST00000358544 C1DQ13901 141 aaKnown RBP6.19□□□□□ -1.42
VPS13B-203ENST00000358544 DDI2Q5TDH0 399 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 AGAP9Q5VTM2 703 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 UTP15Q8TED0 518 aaKnown RBP6.19□□□□□ -1.42
VPS13B-203ENST00000358544 IFT43Q96FT9 208 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 SMAD5Q99717 465 aaKnown RBP6.19□□□□□ -1.42
VPS13B-203ENST00000358544 POMKQ9H5K3 350 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 LNPEPQ9UIQ6 1025 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 PNMA8BQ9ULN7 279 aaPredicted RBP6.19□□□□□ -1.42
VPS13B-203ENST00000358544 ACOT9Q9Y305 439 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 M0QZ92 97 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 HIRAP54198 1017 aaPredicted RBP6.19□□□□□ -1.42
VPS13B-203ENST00000358544 CIAPIN1Q6FI81 312 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 STX12Q86Y82 276 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 HIPK1Q86Z02 1210 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 ETNPPLQ8TBG4 499 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 SLC39A3Q9BRY0 314 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 LRRC40Q9H9A6 602 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 PRR14LQ5THK1 2151 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 RPTORQ8N122 1335 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 GPD1P21695 349 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 FEN1P39748 380 aaKnown RBP6.19□□□□□ -1.42
VPS13B-203ENST00000358544 RFX5P48382 616 aaPredicted RBP6.19□□□□□ -1.42
VPS13B-203ENST00000358544 SULT1E1P49888 294 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 LLGL2Q6P1M3 1020 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 C11orf88Q6PI97 169 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 PPP1R2P1Q96PQ5 205 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 LIMD1Q9UGP4 676 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 MADDQ8WXG6 1647 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 KBTBD13C9JR72 458 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 MYL12BO14950 172 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 CNPP09543 421 aaKnown RBP6.19□□□□□ -1.42
VPS13B-203ENST00000358544 TSPAN19P0C672 248 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 ZNF37AP17032 561 aaPredicted RBP6.19□□□□□ -1.42
VPS13B-203ENST00000358544 CEBPAP49715 358 aaPredicted RBP6.19□□□□□ -1.42
VPS13B-203ENST00000358544 TFDP3Q5H9I0 405 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 ZNF605Q86T29 641 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 SLC35C1Q96A29 364 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 FAM120BQ96EK7 910 aaKnown RBP6.19□□□□□ -1.42
VPS13B-203ENST00000358544 PIF1Q9H611 641 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 ZNF624Q9P2J8 865 aaPredicted RBP6.19□□□□□ -1.42
VPS13B-203ENST00000358544 TSR3Q9UJK0 312 aaKnown RBP6.19□□□□□ -1.42
VPS13B-203ENST00000358544 ZNF462Q96JM2 2506 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 METP08581 1390 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 PRR36Q9H6K5 1346 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 CCDC154A6NI56 674 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 TRDMT1O14717 391 aaKnown RBP6.19□□□□□ -1.42
VPS13B-203ENST00000358544 DDX3YO15523 660 aaKnown RBP6.19□□□□□ -1.42
VPS13B-203ENST00000358544 KLRC4O43908 158 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 TGDSO95455 350 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 KCNA6P17658 529 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 IL6STP40189 918 aaPredicted RBP6.19□□□□□ -1.42
VPS13B-203ENST00000358544 RAD51Q06609 339 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 MOGQ16653 247 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 SPESP1Q6UW49 350 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 ASCC1Q8N9N2 400 aaKnown RBP6.19□□□□□ -1.42
VPS13B-203ENST00000358544 MAGEE2Q8TD90 523 aaPredicted RBP6.19□□□□□ -1.42
VPS13B-203ENST00000358544 ACAT2Q9BWD1 397 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 ANKHQ9HCJ1 492 aa6.19□□□□□ -1.42
VPS13B-203ENST00000358544 RUVBL2Q9Y230 463 aaKnown RBP6.19□□□□□ -1.42
VPS13B-203ENST00000358544 IPMKQ8NFU5 416 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms