RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 HNRNPDQ14103 355 aaKnown RBP13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 PTPN20Q4JDL3 420 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 TMEM240Q5SV17 173 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 DNAJC24Q6P3W2 148 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 DCUN1D2Q6PH85 259 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 TTC7BQ86TV6 843 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 PDCD7Q8N8D1 485 aaKnown RBP13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 DTX3LQ8TDB6 740 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 CPXM1Q96SM3 734 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 TRIM4Q9C037 500 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 NMUR2Q9GZQ4 415 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 CWH43Q9H720 699 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 RNF8O76064 485 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 BEST1O76090 585 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 IFNB1P01574 187 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 PFKMP08237 780 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 ANPEPP15144 967 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 BGNP21810 368 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 GPD2P43304 727 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 SERPINB4P48594 390 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 ACTR3P61158 418 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 OTUD4Q01804 1114 aaKnown RBP13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 DYNC1I2Q13409 638 aaKnown RBP13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 PDCD2Q16342 344 aaPredicted RBP13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 TMCO4Q5TGY1 634 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 LCLAT1Q6UWP7 414 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 LRRTM3Q86VH5 581 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 PALM2Q8IXS6 379 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 CRYBG2Q8N1P7 616 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 TMEM86AQ8N2M4 240 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 RNF217Q8TC41 542 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 ACTL9Q8TC94 416 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 HAUS1Q96CS2 278 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 PCED1BQ96HM7 432 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 KLF6Q99612 283 aaPredicted RBP13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 HTATIP2Q9BUP3 242 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 COLEC11Q9BWP8 271 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 ZNF518BQ9C0D4 1074 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 C1orf21Q9H246 121 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 TMLHEQ9NVH6 421 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 MKS1Q9NXB0 559 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 HESX1Q9UBX0 185 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 SLC4A7Q9Y6M7 1214 aa13.03□□□□□ -0.32
RTFDC1-202ENST00000357348 TCRBV7S3A2A0A539 114 aa13.02□□□□□ -0.33
RTFDC1-202ENST00000357348 E5RJQ4 531 aa13.02□□□□□ -0.33
RTFDC1-202ENST00000357348 GOLGA8RI6L899 631 aa13.02□□□□□ -0.33
RTFDC1-202ENST00000357348 SPAG6O75602 509 aa13.02□□□□□ -0.33
RTFDC1-202ENST00000357348 SLC25A11Q02978 314 aaKnown RBP13.02□□□□□ -0.33
RTFDC1-202ENST00000357348 PMF1Q6P1K2 205 aa13.02□□□□□ -0.33
RTFDC1-202ENST00000357348 FUT10Q6P4F1 479 aa13.02□□□□□ -0.33
RTFDC1-202ENST00000357348 KYAT3Q6YP21 454 aaKnown RBP13.02□□□□□ -0.33
RTFDC1-202ENST00000357348 TREML1Q86YW5 311 aa13.02□□□□□ -0.33
RTFDC1-202ENST00000357348 TRIM42Q8IWZ5 723 aa13.02□□□□□ -0.33
RTFDC1-202ENST00000357348 PDIK1LQ8N165 341 aa13.02□□□□□ -0.33
RTFDC1-202ENST00000357348 ZNF689Q96CS4 500 aaPredicted RBP13.02□□□□□ -0.33
RTFDC1-202ENST00000357348 FAM111AQ96PZ2 611 aa13.02□□□□□ -0.33
RTFDC1-202ENST00000357348 GORASP1Q9BQQ3 440 aa13.02□□□□□ -0.33
RTFDC1-202ENST00000357348 ZDHHC7Q9NXF8 308 aa13.02□□□□□ -0.33
RTFDC1-202ENST00000357348 MRPL42Q9Y6G3 142 aaKnown RBP13.02□□□□□ -0.33
RTFDC1-202ENST00000357348 FAM237BA0A1B0GVD1 139 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 B2RBV5 119 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 BAIAP3O94812 1187 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 ERBB2P04626 1255 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 CCNFP41002 786 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 PLCB3Q01970 1234 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 TBCCQ15814 346 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 DNAL1Q4LDG9 190 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 VARS2Q5ST30 1063 aaKnown RBP13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 KCNT2Q6UVM3 1135 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 PAQR9Q6ZVX9 377 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 SCUBE1Q8IWY4 988 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 PGLYRP2Q96PD5 576 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 KCNK16Q96T55 309 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 ECSITQ9BQ95 431 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 LBHD1Q9BQE6 289 aaPredicted RBP13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 MIS12Q9H081 205 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 ALG13Q9NP73 1137 aaKnown RBP13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 DMAP1Q9NPF5 467 aaPredicted RBP13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 IL1RAPL1Q9NZN1 696 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 KIAA1257Q9ULG3 409 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 PCDHB8Q9UN66 801 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 TEX264Q9Y6I9 313 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 CHD9Q3L8U1 2897 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 PDLIM1O00151 329 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 CYP11A1P05108 521 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 MAP3K7CLP57077 242 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 BBS9Q3SYG4 887 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 RTP2Q5QGT7 225 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 AAGABQ6PD74 315 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 PRSS55Q6UWB4 352 aaPredicted RBP13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 ALYREFQ86V81 257 aaKnown RBP13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 CCNJLQ8IV13 435 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 IGDCC3Q8IVU1 814 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 THEM5Q8N1Q8 247 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 RBM15BQ8NDT2 890 aaKnown RBP13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 RAB3IL1Q8TBN0 382 aa13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 ACSF2Q96CM8 615 aaPredicted RBP13.01□□□□□ -0.33
RTFDC1-202ENST00000357348 PANX3Q96QZ0 392 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms