RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 MGEA5O60502 916 aa8.44□□□□□ -1.06
CDC42SE1-201ENST00000357235 MSCO60682 206 aa8.44□□□□□ -1.06
CDC42SE1-201ENST00000357235 ZBTB7AO95365 584 aa8.44□□□□□ -1.06
CDC42SE1-201ENST00000357235 HSPA4LO95757 839 aa8.44□□□□□ -1.06
CDC42SE1-201ENST00000357235 HOXC6P09630 235 aa8.44□□□□□ -1.06
CDC42SE1-201ENST00000357235 ERVK-10P10266 1014 aa8.44□□□□□ -1.06
CDC42SE1-201ENST00000357235 TKTP29401 623 aaKnown RBP8.44□□□□□ -1.06
CDC42SE1-201ENST00000357235 SDC4P31431 198 aa8.44□□□□□ -1.06
CDC42SE1-201ENST00000357235 CRHR1P34998 444 aa8.44□□□□□ -1.06
CDC42SE1-201ENST00000357235 NUDT2P50583 147 aa8.44□□□□□ -1.06
CDC42SE1-201ENST00000357235 CCT8P50990 548 aa8.44□□□□□ -1.06
CDC42SE1-201ENST00000357235 AP3M2P53677 418 aa8.44□□□□□ -1.06
CDC42SE1-201ENST00000357235 MCCD1P59942 119 aaPredicted RBP8.44□□□□□ -1.06
CDC42SE1-201ENST00000357235 XIAPP98170 497 aa8.44□□□□□ -1.06
CDC42SE1-201ENST00000357235 FOLH1Q04609 750 aa8.44□□□□□ -1.06
CDC42SE1-201ENST00000357235 WASHC5Q12768 1159 aa8.44□□□□□ -1.06
CDC42SE1-201ENST00000357235 CCNIQ14094 377 aa8.44□□□□□ -1.06
CDC42SE1-201ENST00000357235 CNGA3Q16281 694 aa8.44□□□□□ -1.06
CDC42SE1-201ENST00000357235 HEATR6Q6AI08 1181 aaKnown RBP8.44□□□□□ -1.06
CDC42SE1-201ENST00000357235 METTL25Q8N6Q8 603 aa8.44□□□□□ -1.06
CDC42SE1-201ENST00000357235 SLC4A11Q8NBS3 891 aa8.44□□□□□ -1.06
CDC42SE1-201ENST00000357235 CCNYQ8ND76 341 aa8.44□□□□□ -1.06
CDC42SE1-201ENST00000357235 FNIP1Q8TF40 1166 aa8.44□□□□□ -1.06
CDC42SE1-201ENST00000357235 NSMCE3Q96MG7 304 aa8.44□□□□□ -1.06
CDC42SE1-201ENST00000357235 ACO2Q99798 780 aaKnown RBP8.44□□□□□ -1.06
CDC42SE1-201ENST00000357235 EBNA1BP2Q99848 306 aaKnown RBP8.44□□□□□ -1.06
CDC42SE1-201ENST00000357235 SNRNP25Q9BV90 132 aaKnown RBP8.44□□□□□ -1.06
CDC42SE1-201ENST00000357235 SPATA31C2B4DYI2 1134 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 TRDMT1O14717 391 aaKnown RBP8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 KLHL2O95198 593 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 ATG7O95352 703 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 TSHRP16473 764 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 TFE3P19532 575 aaPredicted RBP8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 PHKA2P46019 1235 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 ENTPD1P49961 510 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 MRPS22P82650 360 aaKnown RBP8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 ACAP1Q15027 740 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 TEDDM1Q5T9Z0 273 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 TMCO4Q5TGY1 634 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 ATF7IP2Q5U623 682 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 NXNQ6DKJ4 435 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 STYK1Q6J9G0 422 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 PAOXQ6QHF9 649 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 KCNT2Q6UVM3 1135 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 ERI1Q8IV48 349 aaKnown RBP8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 TMCO5AQ8N6Q1 288 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 PQLC3Q8N755 202 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 CDKL2Q92772 493 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 USP13Q92995 863 aaPredicted RBP8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 MRPS26Q9BYN8 205 aaKnown RBP8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 ACAD9Q9H845 621 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 PARVBQ9HBI1 364 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 GPAMQ9HCL2 828 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 TSPAN16Q9UKR8 245 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 TMA7Q9Y2S6 64 aaKnown RBP8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 PPME1Q9Y570 386 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 H3BSA7 217 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 NOP56O00567 594 aaKnown RBP8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 USP12O75317 370 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 SNNO75324 88 aaPredicted RBP8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 ALDOAP04075 364 aaKnown RBP8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 TFPTP0C1Z6 253 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 HSPA8P11142 646 aaKnown RBP8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 CD1EP15812 388 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 AOC1P19801 751 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 PRKCHP24723 683 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 CYP2F1P24903 491 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 MGAT1P26572 445 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 PMLP29590 882 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 CDH5P33151 784 aaPredicted RBP8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 STT3AP46977 705 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 IDH3AP50213 366 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 CLCN3P51790 818 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 PKNOX1P55347 436 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 NSUN2Q08J23 767 aaKnown RBP eCLIP8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 MSLNQ13421 630 aaPredicted RBP8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 PDAP1Q13442 181 aaKnown RBP8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 OLIG2Q13516 323 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 LY6KQ17RY6 165 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 NBPF12Q5TAG4 269 aaPredicted RBP8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 FAM83AQ86UY5 434 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 ZNF410Q86VK4 478 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 C1orf127Q8N9H9 656 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 USP33Q8TEY7 942 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 CMTM5Q96DZ9 223 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 WRNIP1Q96S55 665 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 LGMNQ99538 433 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 NEURL2Q9BR09 285 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 SENP6Q9GZR1 1112 aaPredicted RBP8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 LHX5Q9H2C1 402 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 TRNAU1APQ9NX07 287 aaKnown RBP8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 TMEM216Q9P0N5 145 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 RABL2AQ9UBK7 228 aaPredicted RBP8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 CPSF3Q9UKF6 684 aaKnown RBP8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 GINS2Q9Y248 185 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 MFHAS1Q9Y4C4 1052 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 DTNAQ9Y4J8 743 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 MAFBQ9Y5Q3 323 aaPredicted RBP8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 NOX1Q9Y5S8 564 aa8.43□□□□□ -1.06
CDC42SE1-201ENST00000357235 NRXN2Q9P2S2 1712 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms