RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 EPN2O95208 641 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 BNC2Q6ZN30 1099 aaPredicted RBP17.56■□□□□ 0.4
COL27A1-201ENST00000356083 LGI2Q8N0V4 545 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 ZNF655Q8N720 491 aaPredicted RBP17.56■□□□□ 0.4
COL27A1-201ENST00000356083 GJD4Q96KN9 370 aaPredicted RBP17.56■□□□□ 0.4
COL27A1-201ENST00000356083 GBA2Q9HCG7 927 aaPredicted RBP17.56■□□□□ 0.4
COL27A1-201ENST00000356083 ARL15Q9NXU5 204 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 ATP10AO60312 1499 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 BTN3A3O00478 584 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 PGM3O95394 542 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 CCR1P32246 355 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 EPHA10Q5JZY3 1008 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 C9orf131Q5VYM1 1079 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 ACAD10Q6JQN1 1059 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 LRRC6Q86X45 466 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 SCUBE1Q8IWY4 988 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 C2orf73Q8N5S3 287 aaPredicted RBP17.56■□□□□ 0.4
COL27A1-201ENST00000356083 TAAR1Q96RJ0 339 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 HGH1Q9BTY7 390 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 TTLL2Q9BWV7 592 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 PLEKHG1Q9ULL1 1385 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 SERPINF2P08697 491 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 ANXA5P08758 320 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 RPL9P32969 192 aaKnown RBP17.56■□□□□ 0.4
COL27A1-201ENST00000356083 TOB2Q14106 344 aaPredicted RBP17.56■□□□□ 0.4
COL27A1-201ENST00000356083 USP41Q3LFD5 358 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 PEX5LQ8IYB4 626 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 ALG6Q9Y672 507 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 PNMA8CA0A1B0GUJ8 204 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 ASNA1O43681 348 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 SPAG6O75602 509 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 DNAJC11Q9NVH1 559 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 COPG2Q9UBF2 871 aa17.56■□□□□ 0.4
COL27A1-201ENST00000356083 TRDMT1O14717 391 aaKnown RBP17.55■□□□□ 0.4
COL27A1-201ENST00000356083 LHX1P48742 406 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 SMCO1Q147U7 214 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 PDPK2PQ6A1A2 396 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 OVOS1Q6IE37 1185 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 IL27RAQ6UWB1 636 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 OR5T3Q8NGG3 340 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 LRRC40Q9H9A6 602 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 BTN3A1O00481 513 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 ACADLP28330 430 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 MPP3Q13368 585 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 STK32CQ86UX6 486 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 ABCG8Q9H221 673 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 PCDHA11Q9Y5I1 949 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 PTCH1Q13635 1447 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 FOXP2O15409 715 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 STX11O75558 287 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 GALK1P51570 392 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 RAD23AP54725 363 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 PFKPQ01813 784 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 ZMYND11Q15326 602 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 METTL6Q8TCB7 284 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 CDK5RAP1Q96SZ6 601 aaKnown RBP17.55■□□□□ 0.4
COL27A1-201ENST00000356083 MCCC2Q9HCC0 563 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 ZNF208O43345 1280 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 ZNF605Q86T29 641 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 RNF148Q8N7C7 305 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 ATP13A1Q9HD20 1204 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 RBM12Q9NTZ6 932 aaKnown RBP17.55■□□□□ 0.4
COL27A1-201ENST00000356083 UBQLN1Q9UMX0 589 aaKnown RBP17.55■□□□□ 0.4
COL27A1-201ENST00000356083 GLRA3O75311 464 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 ZNF432O94892 652 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 CHRNGP07510 517 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 ZNF543Q08ER8 600 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 ADGRG1Q9Y653 693 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 METP08581 1390 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 MED26O95402 600 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 CTNNB1P35222 781 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 CDC42EP5Q6NZY7 148 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 USP45Q70EL2 814 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 FBXO39Q8N4B4 442 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 ISM1B1AKI9 464 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 RTN3O95197 1032 aaPredicted RBP17.55■□□□□ 0.4
COL27A1-201ENST00000356083 IDH2P48735 452 aaKnown RBP17.55■□□□□ 0.4
COL27A1-201ENST00000356083 HSPA14Q0VDF9 509 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 PACS2Q86VP3 889 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 MCRS1Q96EZ8 462 aa17.55■□□□□ 0.4
COL27A1-201ENST00000356083 LY6KQ17RY6 165 aa17.54■□□□□ 0.4
COL27A1-201ENST00000356083 SLC45A4Q5BKX6 768 aa17.54■□□□□ 0.4
COL27A1-201ENST00000356083 ANO9A1A5B4 782 aa17.54■□□□□ 0.4
COL27A1-201ENST00000356083 GSG1L2A8MUP6 293 aa17.54■□□□□ 0.4
COL27A1-201ENST00000356083 TM9SF1O15321 606 aa17.54■□□□□ 0.4
COL27A1-201ENST00000356083 IGSF6O95976 241 aa17.54■□□□□ 0.4
COL27A1-201ENST00000356083 CES1P23141 567 aa17.54■□□□□ 0.4
COL27A1-201ENST00000356083 CBWD6Q4V339 395 aa17.54■□□□□ 0.4
COL27A1-201ENST00000356083 GPSM1Q86YR5 675 aa17.54■□□□□ 0.4
COL27A1-201ENST00000356083 SYT12Q8IV01 421 aa17.54■□□□□ 0.4
COL27A1-201ENST00000356083 FBXO36Q8NEA4 188 aa17.54■□□□□ 0.4
COL27A1-201ENST00000356083 GPR156Q8NFN8 814 aa17.54■□□□□ 0.4
COL27A1-201ENST00000356083 DCUN1D5Q9BTE7 237 aa17.54■□□□□ 0.4
COL27A1-201ENST00000356083 DIDO1Q9BTC0 2240 aaKnown RBP17.54■□□□□ 0.4
COL27A1-201ENST00000356083 OR5F1O95221 314 aa17.54■□□□□ 0.4
COL27A1-201ENST00000356083 USP17L7P0C7H9 530 aa17.54■□□□□ 0.4
COL27A1-201ENST00000356083 MASP1P48740 699 aa17.54■□□□□ 0.4
COL27A1-201ENST00000356083 NECTIN1Q15223 517 aa17.54■□□□□ 0.4
COL27A1-201ENST00000356083 LPCAT2Q7L5N7 544 aa17.54■□□□□ 0.4
COL27A1-201ENST00000356083 BDH2Q9BUT1 245 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms