RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 XKR4Q5GH76 650 aa11.72□□□□□ -0.53
NUDCD3-202ENST00000355451 PTAR1Q7Z6K3 402 aaPredicted RBP11.72□□□□□ -0.53
NUDCD3-202ENST00000355451 FAM98AQ8NCA5 519 aaKnown RBP11.72□□□□□ -0.53
NUDCD3-202ENST00000355451 AGPAT1Q99943 283 aa11.72□□□□□ -0.53
NUDCD3-202ENST00000355451 MYOCQ99972 504 aa11.72□□□□□ -0.53
NUDCD3-202ENST00000355451 SP3Q02447 781 aa11.72□□□□□ -0.53
NUDCD3-202ENST00000355451 ECH1Q13011 328 aa11.72□□□□□ -0.53
NUDCD3-202ENST00000355451 C1orf189Q5VU69 101 aa11.72□□□□□ -0.53
NUDCD3-202ENST00000355451 RETSATQ6NUM9 610 aa11.72□□□□□ -0.53
NUDCD3-202ENST00000355451 PPP1R18Q6NYC8 613 aa11.72□□□□□ -0.53
NUDCD3-202ENST00000355451 FNDC5Q8NAU1 212 aa11.72□□□□□ -0.53
NUDCD3-202ENST00000355451 LPCAT1Q8NF37 534 aa11.72□□□□□ -0.53
NUDCD3-202ENST00000355451 RNF31Q96EP0 1072 aa11.72□□□□□ -0.53
NUDCD3-202ENST00000355451 MAML3Q96JK9 1138 aa11.72□□□□□ -0.53
NUDCD3-202ENST00000355451 PUS3Q9BZE2 481 aaKnown RBP11.72□□□□□ -0.53
NUDCD3-202ENST00000355451 BRD9Q9H8M2 597 aa11.72□□□□□ -0.53
NUDCD3-202ENST00000355451 FAM187AA6NFU0 413 aa11.72□□□□□ -0.53
NUDCD3-202ENST00000355451 CCT8L1PA6NM43 557 aa11.72□□□□□ -0.53
NUDCD3-202ENST00000355451 CCNYL3P0C7X3 344 aa11.72□□□□□ -0.53
NUDCD3-202ENST00000355451 CHRNA5P30532 468 aa11.72□□□□□ -0.53
NUDCD3-202ENST00000355451 SERPINB8P50452 374 aa11.72□□□□□ -0.53
NUDCD3-202ENST00000355451 SELENOVP59797 346 aa11.72□□□□□ -0.53
NUDCD3-202ENST00000355451 STARD8Q92502 1023 aa11.72□□□□□ -0.53
NUDCD3-202ENST00000355451 RBM15Q96T37 977 aaKnown RBP eCLIP11.72□□□□□ -0.531e-6■■■■□ 25.7
NUDCD3-202ENST00000355451 MRPS33Q9Y291 106 aaKnown RBP11.72□□□□□ -0.53
NUDCD3-202ENST00000355451 CNTNAP2Q9UHC6 1331 aa11.72□□□□□ -0.53
NUDCD3-202ENST00000355451 PLEKHA8P1O95397 391 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 MYL9P24844 172 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 CBWD6Q4V339 395 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 ALG10Q5BKT4 473 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 ADCY4Q8NFM4 1077 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 PGLYRP2Q96PD5 576 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 PSMD9O00233 223 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 AKAP8O43823 692 aaKnown RBP11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 ZC2HC1CQ53FD0 456 aaPredicted RBP11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 PGM2L1Q6PCE3 622 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 E2F7Q96AV8 911 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 ZNF285Q96NJ3 590 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 PANX3Q96QZ0 392 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 SPATA5L1Q9BVQ7 753 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 CLIC5Q9NZA1 410 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 COPS7AQ9UBW8 275 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 TBC1D3DA0A087WVF3 549 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 TBC1D3IA0A087WXS9 549 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 TBC1D3EA0A087X179 549 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 TBC1D3KA0A087X1G2 549 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 TBC1D3FA6NER0 549 aaPredicted RBP11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 TBC1D3LB9A6J9 549 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 ATP8B1O43520 1251 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 TBC1D3HP0C7X1 549 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 PSME3P61289 254 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 TBC1D3GQ6DHY5 549 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 TBC1D3CQ6IPX1 549 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 SLFN11Q7Z7L1 901 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 MTDHQ86UE4 582 aaKnown RBP11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 TBC1D3Q8IZP1 549 aaPredicted RBP11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 ZFP28Q8NHY6 868 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 EFHD2Q96C19 240 aaPredicted RBP11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 MRPL9Q9BYD2 267 aaKnown RBP11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 POU2F3Q9UKI9 436 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 TNFAIP8O95379 198 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 LTFP02788 710 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 CRATP43155 626 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 POLD2P49005 469 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 COPAP53621 1224 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 CACNA2D1P54289 1103 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 DRG2P55039 364 aaKnown RBP11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 MBTD1Q05BQ5 628 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 FOXM1Q08050 763 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 PLEKHH3Q7Z736 793 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 CKAP2Q8WWK9 683 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 CYP3A43Q9HB55 503 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 PXMP2Q9NR77 195 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 ATPIF1Q9UII2 106 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 DRG1Q9Y295 367 aaKnown RBP11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 NCAPD2Q15021 1401 aa11.71□□□□□ -0.53
NUDCD3-202ENST00000355451 PNMA8CA0A1B0GUJ8 204 aa11.71□□□□□ -0.54
NUDCD3-202ENST00000355451 MDFIC2A0A1B0GVS7 189 aa11.71□□□□□ -0.54
NUDCD3-202ENST00000355451 CCDC154A6NI56 674 aa11.71□□□□□ -0.54
NUDCD3-202ENST00000355451 H0Y858 1186 aa11.71□□□□□ -0.54
NUDCD3-202ENST00000355451 CACNB4O00305 520 aaPredicted RBP11.71□□□□□ -0.54
NUDCD3-202ENST00000355451 PLIN3O60664 434 aa11.71□□□□□ -0.54
NUDCD3-202ENST00000355451 CFIP05156 583 aa11.71□□□□□ -0.54
NUDCD3-202ENST00000355451 ZNF7P17097 686 aaPredicted RBP11.71□□□□□ -0.54
NUDCD3-202ENST00000355451 PRKCEQ02156 737 aa11.71□□□□□ -0.54
NUDCD3-202ENST00000355451 RESTQ13127 1097 aa11.71□□□□□ -0.54
NUDCD3-202ENST00000355451 LONRF1Q17RB8 773 aa11.71□□□□□ -0.54
NUDCD3-202ENST00000355451 GXYLT1Q4G148 440 aa11.71□□□□□ -0.54
NUDCD3-202ENST00000355451 GPAT2Q6NUI2 795 aa11.71□□□□□ -0.54
NUDCD3-202ENST00000355451 FAM71DQ8N9W8 422 aa11.71□□□□□ -0.54
NUDCD3-202ENST00000355451 PMEPA1Q969W9 287 aa11.71□□□□□ -0.54
NUDCD3-202ENST00000355451 AP4E1Q9UPM8 1137 aa11.71□□□□□ -0.54
NUDCD3-202ENST00000355451 IGF2BP3O00425 579 aaKnown RBP eCLIP11.71□□□□□ -0.54
NUDCD3-202ENST00000355451 SCGB2A1O75556 95 aa11.71□□□□□ -0.54
NUDCD3-202ENST00000355451 LHX1P48742 406 aa11.71□□□□□ -0.54
NUDCD3-202ENST00000355451 SLC25A25Q6KCM7 469 aa11.71□□□□□ -0.54
NUDCD3-202ENST00000355451 MZT2BQ6NZ67 158 aa11.71□□□□□ -0.54
NUDCD3-202ENST00000355451 CXXC5Q7LFL8 322 aaKnown RBP11.71□□□□□ -0.54
NUDCD3-202ENST00000355451 PAGE2Q7Z2X7 111 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms