RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 TBC1D3EA0A087X179 549 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 TBC1D3KA0A087X1G2 549 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 TBC1D3BA6NDS4 549 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 TBC1D3FA6NER0 549 aaPredicted RBP1.77□□□□□ -2.13
BRCA1-202ENST00000354071 PRR5-ARHGAP8B1AHC4 643 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 TBC1D3LB9A6J9 549 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 HRKO00198 91 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 ETV2O00321 342 aaPredicted RBP1.77□□□□□ -2.13
BRCA1-202ENST00000354071 TBX10O75333 385 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 CHEK2O96017 543 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 TBC1D3HP0C7X1 549 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 SELLP14151 372 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 PRPH2P23942 346 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 MCM3P25205 808 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 MVDP53602 400 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 ZNF844Q08AG5 666 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 CHAF1BQ13112 559 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 IL13RA2Q14627 380 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 COL28A1Q2UY09 1125 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 MMEL1Q495T6 779 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 TBC1D3GQ6DHY5 549 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 TBC1D3CQ6IPX1 549 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 PLBD1Q6P4A8 553 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 TBC1D3Q8IZP1 549 aaPredicted RBP1.77□□□□□ -2.13
BRCA1-202ENST00000354071 ARL10Q8N8L6 244 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 OSCP1Q8WVF1 389 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 RABGGTAQ92696 567 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 DDX17Q92841 729 aaKnown RBP1.77□□□□□ -2.13
BRCA1-202ENST00000354071 ELMOD3Q96FG2 381 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 NUF2Q9BZD4 464 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 TPSD1Q9BZJ3 242 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 TAOK3Q9H2K8 898 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 NRDE2Q9H7Z3 1164 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 LTB4R2Q9NPC1 389 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 HCFC1R1Q9NWW0 138 aa1.77□□□□□ -2.13
BRCA1-202ENST00000354071 CHCHD3Q9NX63 227 aaKnown RBP1.77□□□□□ -2.13
BRCA1-202ENST00000354071 CFDP1Q9UEE9 299 aaPredicted RBP1.77□□□□□ -2.13
BRCA1-202ENST00000354071 ZHX1Q9UKY1 873 aaPredicted RBP1.77□□□□□ -2.13
BRCA1-202ENST00000354071 COL16A1Q07092 1604 aaPredicted RBP1.76□□□□□ -2.13
BRCA1-202ENST00000354071 UNC119BA6NIH7 251 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 ABLIM1O14639 778 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 TP73O15350 636 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 GPANK1O95872 356 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 SCGB1D1O95968 90 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 CHGBP05060 677 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 TMEM225BP0DP42 221 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 CYP2C9P11712 490 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 GNAT2P19087 354 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 HNF1BP35680 557 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 EIF4A1P60842 406 aaKnown RBP1.76□□□□□ -2.13
BRCA1-202ENST00000354071 ZBTB16Q05516 673 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 SEMA3BQ13214 749 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 CAMK1Q14012 370 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 MLANAQ16655 118 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 ZNF805Q5CZA5 627 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 DNAJC21Q5F1R6 531 aaKnown RBP1.76□□□□□ -2.13
BRCA1-202ENST00000354071 TMEM198Q66K66 360 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 KRTAP5-3Q6L8H2 238 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 KLHL24Q6TFL4 600 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 CHST9Q7L1S5 443 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 KDELC2Q7Z4H8 507 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 PLEKHH3Q7Z736 793 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 ZSCAN30Q86W11 494 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 IQCA1Q86XH1 822 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 KRT73Q86Y46 540 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 CCDC170Q8IYT3 715 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 POU5F2Q8N7G0 328 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 PTGR2Q8N8N7 351 aaPredicted RBP1.76□□□□□ -2.13
BRCA1-202ENST00000354071 LINC01356Q8N9X3 169 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 TP53I13Q8NBR0 393 aaPredicted RBP1.76□□□□□ -2.13
BRCA1-202ENST00000354071 BEND2Q8NDZ0 799 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 CADM4Q8NFZ8 388 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 ZFP28Q8NHY6 868 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 ETNPPLQ8TBG4 499 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 SCFD2Q8WU76 684 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 XAGE5Q8WWM1 108 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 RSPH1Q8WYR4 309 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 IP6K1Q92551 441 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 RSC1A1Q92681 617 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 SDCCAG3Q96C92 435 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 LINC00615Q96LM1 132 aaPredicted RBP1.76□□□□□ -2.13
BRCA1-202ENST00000354071 CMTM3Q96MX0 182 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 EIF3CQ99613 913 aaKnown RBP1.76□□□□□ -2.13
BRCA1-202ENST00000354071 MEGF9Q9H1U4 602 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 DIAPH3Q9NSV4 1193 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 NLKQ9UBE8 527 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 CHORDC1Q9UHD1 332 aaPredicted RBP1.76□□□□□ -2.13
BRCA1-202ENST00000354071 UNC79Q9P2D8 2635 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 A0A1W2PQM1 296 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 GXYLT2A0PJZ3 443 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 A1L4Q6 167 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 TRIM64A6NGJ6 449 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 TRIM64BA6NI03 449 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 LIPT2A6NK58 231 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 C16orf96A6NNT2 1141 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 ERN1O75460 977 aaKnown RBP1.76□□□□□ -2.13
BRCA1-202ENST00000354071 NCR1O76036 304 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 SLCO2B1O94956 709 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 HSPA1AP0DMV8 641 aaKnown RBP1.76□□□□□ -2.13
BRCA1-202ENST00000354071 HSPA1BP0DMV9 641 aaKnown RBP1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms