RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 MSI1O43347 362 aaKnown RBP16.3■□□□□ 0.2
COPE-202ENST00000349893 CUTAO60888 179 aa16.3■□□□□ 0.2
COPE-202ENST00000349893 DRD3P35462 400 aa16.3■□□□□ 0.2
COPE-202ENST00000349893 SLC8A3P57103 927 aa16.3■□□□□ 0.2
COPE-202ENST00000349893 GABREP78334 506 aa16.3■□□□□ 0.2
COPE-202ENST00000349893 SKOR1P84550 965 aa16.3■□□□□ 0.2
COPE-202ENST00000349893 PPP3CAQ08209 521 aa16.3■□□□□ 0.2
COPE-202ENST00000349893 STK38Q15208 465 aa16.3■□□□□ 0.2
COPE-202ENST00000349893 RFWD3Q6PCD5 774 aa16.3■□□□□ 0.2
COPE-202ENST00000349893 MFN1Q8IWA4 741 aa16.3■□□□□ 0.2
COPE-202ENST00000349893 SLC25A45Q8N413 288 aa16.3■□□□□ 0.2
COPE-202ENST00000349893 OR4C6Q8NH72 309 aa16.3■□□□□ 0.2
COPE-202ENST00000349893 OR14C36Q8NHC7 312 aa16.3■□□□□ 0.2
COPE-202ENST00000349893 RNF139Q8WU17 664 aa16.3■□□□□ 0.2
COPE-202ENST00000349893 KCNE4Q8WWG9 221 aa16.3■□□□□ 0.2
COPE-202ENST00000349893 NAF1Q96HR8 494 aaKnown RBP16.3■□□□□ 0.2
COPE-202ENST00000349893 PRICKLE1Q96MT3 831 aaPredicted RBP16.3■□□□□ 0.2
COPE-202ENST00000349893 POLR1BQ9H9Y6 1135 aa16.3■□□□□ 0.2
COPE-202ENST00000349893 ABCC13Q9NSE7 274 aa16.3■□□□□ 0.2
COPE-202ENST00000349893 ERVW-1Q9UQF0 538 aa16.3■□□□□ 0.2
COPE-202ENST00000349893 MTMR6Q9Y217 621 aa16.3■□□□□ 0.2
COPE-202ENST00000349893 FLNCQ14315 2725 aa16.29■□□□□ 0.2
COPE-202ENST00000349893 YJEFN3A6XGL0 299 aa16.29■□□□□ 0.2
COPE-202ENST00000349893 TTC34A8MYJ7 566 aa16.29■□□□□ 0.2
COPE-202ENST00000349893 E7ENQ6 273 aa16.29■□□□□ 0.2
COPE-202ENST00000349893 POLR2DO15514 142 aaKnown RBP16.29■□□□□ 0.2
COPE-202ENST00000349893 OPA1O60313 960 aa16.29■□□□□ 0.2
COPE-202ENST00000349893 MPOP05164 745 aa16.29■□□□□ 0.2
COPE-202ENST00000349893 GP1BAP07359 652 aa16.29■□□□□ 0.2
COPE-202ENST00000349893 CKMT1AP12532 417 aa16.29■□□□□ 0.2
COPE-202ENST00000349893 GCLMP48507 274 aa16.29■□□□□ 0.2
COPE-202ENST00000349893 ERICH6BQ5W0A0 696 aa16.29■□□□□ 0.2
COPE-202ENST00000349893 NUGGCQ68CJ6 796 aa16.29■□□□□ 0.2
COPE-202ENST00000349893 UNC45BQ8IWX7 931 aa16.29■□□□□ 0.2
COPE-202ENST00000349893 HJURPQ8NCD3 748 aaPredicted RBP16.29■□□□□ 0.2
COPE-202ENST00000349893 EDEM1Q92611 657 aa16.29■□□□□ 0.2
COPE-202ENST00000349893 DEPDC7Q96QD5 511 aa16.29■□□□□ 0.2
COPE-202ENST00000349893 CISHQ9NSE2 258 aa16.29■□□□□ 0.2
COPE-202ENST00000349893 CYTH4Q9UIA0 394 aa16.29■□□□□ 0.2
COPE-202ENST00000349893 FRMD4BQ9Y2L6 1034 aa16.29■□□□□ 0.2
COPE-202ENST00000349893 COL27A1Q8IZC6 1860 aaPredicted RBP16.29■□□□□ 0.2
COPE-202ENST00000349893 GOLGA6L7A0A1B0GV03 622 aa16.28■□□□□ 0.2
COPE-202ENST00000349893 K7ENP7 123 aa16.28■□□□□ 0.2
COPE-202ENST00000349893 KLK10O43240 276 aa16.28■□□□□ 0.2
COPE-202ENST00000349893 SLC7A4O43246 635 aa16.28■□□□□ 0.2
COPE-202ENST00000349893 ACSL4O60488 711 aa16.28■□□□□ 0.2
COPE-202ENST00000349893 NEFLP07196 543 aa16.28■□□□□ 0.2
COPE-202ENST00000349893 GIMD1P0DJR0 217 aa16.28■□□□□ 0.2
COPE-202ENST00000349893 MZF1P28698 734 aaPredicted RBP16.28■□□□□ 0.2
COPE-202ENST00000349893 PSMD8P48556 350 aa16.28■□□□□ 0.2
COPE-202ENST00000349893 SLC11A2P49281 568 aa16.28■□□□□ 0.2
COPE-202ENST00000349893 CSRP3P50461 194 aa16.28■□□□□ 0.2
COPE-202ENST00000349893 SRSF1Q07955 248 aaKnown RBP eCLIP16.28■□□□□ 0.24e-6■□□□□ 8.1
COPE-202ENST00000349893 ADIGQ0VDE8 80 aa16.28■□□□□ 0.2
COPE-202ENST00000349893 ELAVL3Q14576 367 aaKnown RBP16.28■□□□□ 0.2
COPE-202ENST00000349893 NFIL3Q16649 462 aa16.28■□□□□ 0.2
COPE-202ENST00000349893 PITRM1Q5JRX3 1037 aa16.28■□□□□ 0.2
COPE-202ENST00000349893 CEP135Q66GS9 1140 aa16.28■□□□□ 0.2
COPE-202ENST00000349893 NADSYN1Q6IA69 706 aa16.28■□□□□ 0.2
COPE-202ENST00000349893 INO80CQ6PI98 192 aaPredicted RBP16.28■□□□□ 0.2
COPE-202ENST00000349893 INTS8Q75QN2 995 aaKnown RBP16.28■□□□□ 0.2
COPE-202ENST00000349893 PRPF39Q86UA1 669 aaKnown RBP16.28■□□□□ 0.2
COPE-202ENST00000349893 TRIM69Q86WT6 500 aa16.28■□□□□ 0.2
COPE-202ENST00000349893 KCTD13Q8WZ19 329 aa16.28■□□□□ 0.2
COPE-202ENST00000349893 PTPRN2Q92932 1015 aa16.28■□□□□ 0.2
COPE-202ENST00000349893 CNGB3Q9NQW8 809 aa16.28■□□□□ 0.2
COPE-202ENST00000349893 THSD1Q9NS62 852 aa16.28■□□□□ 0.2
COPE-202ENST00000349893 TJP2Q9UDY2 1190 aa16.28■□□□□ 0.2
COPE-202ENST00000349893 TRAF3IP3Q9Y228 551 aa16.28■□□□□ 0.2
COPE-202ENST00000349893 BSNQ9UPA5 3926 aa16.27■□□□□ 0.2
COPE-202ENST00000349893 DOCK9Q9BZ29 2069 aa16.27■□□□□ 0.2
COPE-202ENST00000349893 TBC1D3DA0A087WVF3 549 aa16.27■□□□□ 0.2
COPE-202ENST00000349893 TBC1D3IA0A087WXS9 549 aa16.27■□□□□ 0.2
COPE-202ENST00000349893 TBC1D3EA0A087X179 549 aa16.27■□□□□ 0.2
COPE-202ENST00000349893 TBC1D3KA0A087X1G2 549 aa16.27■□□□□ 0.2
COPE-202ENST00000349893 TBC1D3FA6NER0 549 aaPredicted RBP16.27■□□□□ 0.2
COPE-202ENST00000349893 TBC1D3LB9A6J9 549 aa16.27■□□□□ 0.2
COPE-202ENST00000349893 PYCARD-AS1I3L0S3 204 aa16.27■□□□□ 0.2
COPE-202ENST00000349893 PLRG1O43660 514 aaKnown RBP16.27■□□□□ 0.2
COPE-202ENST00000349893 SLC28A2O43868 658 aa16.27■□□□□ 0.2
COPE-202ENST00000349893 SDC3O75056 442 aa16.27■□□□□ 0.2
COPE-202ENST00000349893 USP12O75317 370 aa16.27■□□□□ 0.2
COPE-202ENST00000349893 YEATS4O95619 227 aa16.27■□□□□ 0.2
COPE-202ENST00000349893 TBC1D3HP0C7X1 549 aa16.27■□□□□ 0.2
COPE-202ENST00000349893 TRIM49P0CI25 452 aa16.27■□□□□ 0.2
COPE-202ENST00000349893 TRIM49CP0CI26 452 aa16.27■□□□□ 0.2
COPE-202ENST00000349893 DGKAP23743 735 aa16.27■□□□□ 0.2
COPE-202ENST00000349893 CTSOP43234 321 aaPredicted RBP16.27■□□□□ 0.2
COPE-202ENST00000349893 ECT2LQ008S8 904 aa16.27■□□□□ 0.2
COPE-202ENST00000349893 FSCBQ5H9T9 825 aa16.27■□□□□ 0.2
COPE-202ENST00000349893 TBC1D3GQ6DHY5 549 aa16.27■□□□□ 0.2
COPE-202ENST00000349893 TBC1D3CQ6IPX1 549 aa16.27■□□□□ 0.2
COPE-202ENST00000349893 TBC1D3Q8IZP1 549 aaPredicted RBP16.27■□□□□ 0.2
COPE-202ENST00000349893 STK40Q8N2I9 435 aa16.27■□□□□ 0.2
COPE-202ENST00000349893 TMEM145Q8NBT3 493 aa16.27■□□□□ 0.2
COPE-202ENST00000349893 CCDC150Q8NCX0 1101 aa16.27■□□□□ 0.2
COPE-202ENST00000349893 TATDN2Q93075 761 aa16.27■□□□□ 0.2
COPE-202ENST00000349893 MYEOVQ96EZ4 313 aa16.27■□□□□ 0.2
COPE-202ENST00000349893 IPO9Q96P70 1041 aaKnown RBP16.27■□□□□ 0.2
COPE-202ENST00000349893 LRRC4Q9HBW1 653 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms