RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 TERB1Q8NA31 727 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 KAT5Q92993 513 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 ANKRD60Q9BZ19 345 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 TRPV6Q9H1D0 765 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 ATP13A3Q9H7F0 1226 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 PPCSQ9HAB8 311 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 C12orf10Q9HB07 376 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 UBE2TQ9NPD8 197 aaPredicted RBP10.9□□□□□ -0.66
CAPN3-203ENST00000349748 THG1LQ9NWX6 298 aaKnown RBP10.9□□□□□ -0.66
CAPN3-203ENST00000349748 GMIPQ9P107 970 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 SIRPGQ9P1W8 387 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 DNM3Q9UQ16 869 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 RWDD3Q9Y3V2 267 aa10.9□□□□□ -0.66
CAPN3-203ENST00000349748 ATRNL1Q5VV63 1379 aa10.9□□□□□ -0.67
CAPN3-203ENST00000349748 ATAD5Q96QE3 1844 aa10.9□□□□□ -0.67
CAPN3-203ENST00000349748 GTPBP10A4D1E9 387 aaKnown RBP10.89□□□□□ -0.67
CAPN3-203ENST00000349748 ZBTB14O43829 449 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 KCNJ13O60928 360 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 SNNO75324 88 aaPredicted RBP10.89□□□□□ -0.67
CAPN3-203ENST00000349748 MTA2O94776 668 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 NADKO95544 446 aaPredicted RBP10.89□□□□□ -0.67
CAPN3-203ENST00000349748 CAPNS1P04632 268 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 ACAT1P24752 427 aaKnown RBP10.89□□□□□ -0.67
CAPN3-203ENST00000349748 SERPINB1P30740 379 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 NAMPTP43490 491 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 QARSP47897 775 aaKnown RBP10.89□□□□□ -0.67
CAPN3-203ENST00000349748 CEACAM7Q14002 265 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 KLHL38Q2WGJ6 581 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 BBS9Q3SYG4 887 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 C2CD6Q53TS8 623 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 RNASEH2BQ5TBB1 312 aaKnown RBP10.89□□□□□ -0.67
CAPN3-203ENST00000349748 RSBN1Q5VWQ0 802 aaPredicted RBP10.89□□□□□ -0.67
CAPN3-203ENST00000349748 PPP4R4Q6NUP7 873 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 GALNT7Q86SF2 657 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 HERC6Q8IVU3 1022 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 PALM2Q8IXS6 379 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 NPLOC4Q8TAT6 608 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 ZFP90Q8TF47 636 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 TRIB2Q92519 343 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 TMA16Q96EY4 203 aaKnown RBP10.89□□□□□ -0.67
CAPN3-203ENST00000349748 MARK4Q96L34 752 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 CSF3RQ99062 836 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 RUSC1Q9BVN2 902 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 DCP1AQ9NPI6 582 aaPredicted RBP10.89□□□□□ -0.67
CAPN3-203ENST00000349748 ARMC1Q9NVT9 282 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 DUS2Q9NX74 493 aaKnown RBP10.89□□□□□ -0.67
CAPN3-203ENST00000349748 C10orf71Q711Q0 1435 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 RREB1Q92766 1687 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 IQANK1A0A1B0GTG1 560 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 TRIM49D1C9J1S8 452 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 SNPHO15079 494 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 GCATO75600 419 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 KRT3P12035 628 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 TCEAL1Q15170 157 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 PPP1R3AQ16821 1122 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 FAM214AQ32MH5 1076 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 ATG14Q6ZNE5 492 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 CCDC28AQ8IWP9 274 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 CADM2Q8N3J6 435 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 C7orf57Q8NEG2 295 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 ANGPTL6Q8NI99 470 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 ADPRHL2Q9NX46 363 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 PLLPQ9Y342 182 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 SNX13Q9Y5W8 968 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 SOCS7O14512 581 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 CALUO43852 315 aaPredicted RBP10.89□□□□□ -0.67
CAPN3-203ENST00000349748 INHBAP08476 426 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 ATXN8OSP0DMR3 200 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 POLR2CP19387 275 aaPredicted RBP10.89□□□□□ -0.67
CAPN3-203ENST00000349748 MAPK4P31152 587 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 PTGS2P35354 604 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 IDH3AP50213 366 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 STX1BP61266 288 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 RPS6P62753 249 aaKnown RBP10.89□□□□□ -0.67
CAPN3-203ENST00000349748 HSPA14Q0VDF9 509 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 PNMA1Q8ND90 353 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.89□□□□□ -0.67
CAPN3-203ENST00000349748 OMA1Q96E52 524 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 TXNDC15Q96J42 360 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 SLC4A5Q9BY07 1137 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 PNPOQ9NVS9 261 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 COQ3Q9NZJ6 369 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 MAD2L2Q9UI95 211 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 POLHQ9Y253 713 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 PCDHAC2Q9Y5I4 1007 aa10.89□□□□□ -0.67
CAPN3-203ENST00000349748 PI4K2BG5E9Z4 385 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 EDIL3O43854 480 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 NDUFS2O75306 463 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 ALDH1A2O94788 518 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 ASNSP08243 561 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 ARNTP27540 789 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 SERPINB5P36952 375 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 POLR2IP36954 125 aaKnown RBP10.88□□□□□ -0.67
CAPN3-203ENST00000349748 PRKCEQ02156 737 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 PRKCQQ04759 706 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 GRAPQ13588 217 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 BMPR2Q13873 1038 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 MORF4L2Q15014 288 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 NHSL2Q5HYW2 709 aa10.88□□□□□ -0.67
CAPN3-203ENST00000349748 TUBA3EQ6PEY2 450 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms