RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 SCML4Q8N228 414 aa13.79□□□□□ -0.2
UBA3-201ENST00000349511 FAM71DQ8N9W8 422 aa13.79□□□□□ -0.2
UBA3-201ENST00000349511 KLHL23Q8NBE8 558 aa13.79□□□□□ -0.2
UBA3-201ENST00000349511 TTC13Q8NBP0 860 aa13.79□□□□□ -0.2
UBA3-201ENST00000349511 ZNF461Q8TAF7 563 aa13.79□□□□□ -0.2
UBA3-201ENST00000349511 DENND1AQ8TEH3 1009 aa13.79□□□□□ -0.2
UBA3-201ENST00000349511 PGAP3Q96FM1 320 aaPredicted RBP13.79□□□□□ -0.2
UBA3-201ENST00000349511 TRABDQ9H4I3 376 aa13.79□□□□□ -0.2
UBA3-201ENST00000349511 EBF2Q9HAK2 575 aa13.79□□□□□ -0.2
UBA3-201ENST00000349511 XPO7Q9UIA9 1087 aaKnown RBP13.79□□□□□ -0.2
UBA3-201ENST00000349511 STK38LQ9Y2H1 464 aa13.79□□□□□ -0.2
UBA3-201ENST00000349511 INSL6Q9Y581 213 aa13.79□□□□□ -0.2
UBA3-201ENST00000349511 SLC4A7Q9Y6M7 1214 aa13.79□□□□□ -0.2
UBA3-201ENST00000349511 PDE4DIPQ5VU43 2346 aa13.79□□□□□ -0.2
UBA3-201ENST00000349511 SLC38A8A6NNN8 435 aa13.79□□□□□ -0.2
UBA3-201ENST00000349511 IRAK2O43187 625 aa13.79□□□□□ -0.2
UBA3-201ENST00000349511 MYOGP15173 224 aa13.79□□□□□ -0.2
UBA3-201ENST00000349511 ATP2A2P16615 1042 aaKnown RBP13.79□□□□□ -0.2
UBA3-201ENST00000349511 CXCR3P49682 368 aa13.79□□□□□ -0.2
UBA3-201ENST00000349511 HTRA4P83105 476 aaPredicted RBP13.79□□□□□ -0.2
UBA3-201ENST00000349511 CCDC15Q0P6D6 951 aa13.79□□□□□ -0.2
UBA3-201ENST00000349511 CAPN12Q6ZSI9 719 aa13.79□□□□□ -0.2
UBA3-201ENST00000349511 TP53INP2Q8IXH6 220 aa13.79□□□□□ -0.2
UBA3-201ENST00000349511 RSAD2Q8WXG1 361 aa13.79□□□□□ -0.2
UBA3-201ENST00000349511 DPF3Q92784 378 aa13.79□□□□□ -0.2
UBA3-201ENST00000349511 FAF2Q96CS3 445 aa13.79□□□□□ -0.2
UBA3-201ENST00000349511 KIF9Q9HAQ2 790 aa13.79□□□□□ -0.2
UBA3-201ENST00000349511 ARHGEF4Q9NR80 690 aa13.79□□□□□ -0.2
UBA3-201ENST00000349511 MRPL17Q9NRX2 175 aaKnown RBP13.79□□□□□ -0.2
UBA3-201ENST00000349511 DRG1Q9Y295 367 aaKnown RBP13.79□□□□□ -0.2
UBA3-201ENST00000349511 EEF2KO00418 725 aaKnown RBP13.78□□□□□ -0.2
UBA3-201ENST00000349511 PRPF4O43172 522 aaKnown RBP eCLIP13.78□□□□□ -0.2
UBA3-201ENST00000349511 F9P00740 461 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 ITGAVP06756 1048 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 HMBSP08397 361 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 RPSAP08865 295 aaKnown RBP13.78□□□□□ -0.2
UBA3-201ENST00000349511 CCNB1P14635 433 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 MSH2P43246 934 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 RPL10AP62906 217 aaKnown RBP13.78□□□□□ -0.2
UBA3-201ENST00000349511 SMARCB1Q12824 385 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 DNAJC3Q13217 504 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 NOMO1Q15155 1222 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 ARL13BQ3SXY8 428 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 SYCP2LQ5T4T6 812 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 NCBP2-AS2Q69YL0 99 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 HERC6Q8IVU3 1022 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 SPOCK2Q92563 424 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 NKD2Q969F2 451 aaPredicted RBP13.78□□□□□ -0.2
UBA3-201ENST00000349511 THOC1Q96FV9 657 aaKnown RBP13.78□□□□□ -0.2
UBA3-201ENST00000349511 HERC2P3Q9BVR0 1158 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 CCSER2Q9H7U1 834 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 VPS37BQ9H9H4 285 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 RRN3Q9NYV6 651 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 OR12D3Q9UGF7 316 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 AFF4Q9UHB7 1163 aaKnown RBP13.78□□□□□ -0.2
UBA3-201ENST00000349511 PHTF1Q9UMS5 762 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 STARD13Q9Y3M8 1113 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 NUP205Q92621 2012 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 GRXCR1A8MXD5 290 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 TEX28O15482 410 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 ABLIM3O94929 683 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 RTN3O95197 1032 aaPredicted RBP13.78□□□□□ -0.2
UBA3-201ENST00000349511 ANP32DO95626 131 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 IGLV3-25P01717 112 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 KRT15P19012 456 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 SKIV2L2P42285 1042 aaKnown RBP13.78□□□□□ -0.2
UBA3-201ENST00000349511 SPARCL1Q14515 664 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 MORF4L2Q15014 288 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 RNASEH2BQ5TBB1 312 aaKnown RBP13.78□□□□□ -0.2
UBA3-201ENST00000349511 PSRC1Q6PGN9 363 aaPredicted RBP13.78□□□□□ -0.2
UBA3-201ENST00000349511 RFX8Q6ZV50 586 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 TMC7Q7Z402 723 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 ZBED8Q8IZ13 594 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 C4orf33Q8N1A6 199 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 C2orf15Q8WU43 125 aaKnown RBP13.78□□□□□ -0.2
UBA3-201ENST00000349511 SPATA17Q96L03 361 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 SLC9A7Q96T83 725 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 OXCT2Q9BYC2 517 aaPredicted RBP13.78□□□□□ -0.2
UBA3-201ENST00000349511 MYLK2Q9H1R3 596 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 IL37Q9NZH6 218 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 GRID1Q9ULK0 1009 aa13.78□□□□□ -0.2
UBA3-201ENST00000349511 XIRP2A4UGR9 3374 aa13.77□□□□□ -0.2
UBA3-201ENST00000349511 PRRG1O14668 218 aa13.77□□□□□ -0.21
UBA3-201ENST00000349511 ALOX15BO15296 676 aa13.77□□□□□ -0.21
UBA3-201ENST00000349511 MFSD11O43934 449 aa13.77□□□□□ -0.21
UBA3-201ENST00000349511 UNC5CO95185 931 aa13.77□□□□□ -0.21
UBA3-201ENST00000349511 RBL1P28749 1068 aa13.77□□□□□ -0.21
UBA3-201ENST00000349511 TUFMP49411 452 aaKnown RBP13.77□□□□□ -0.21
UBA3-201ENST00000349511 TPI1P60174 286 aa13.77□□□□□ -0.21
UBA3-201ENST00000349511 EIF4EBP2Q13542 120 aaPredicted RBP13.77□□□□□ -0.21
UBA3-201ENST00000349511 C10orf120Q5SQS8 335 aa13.77□□□□□ -0.21
UBA3-201ENST00000349511 NTAN1Q96AB6 310 aa13.77□□□□□ -0.21
UBA3-201ENST00000349511 MRRFQ96E11 262 aaKnown RBP13.77□□□□□ -0.21
UBA3-201ENST00000349511 SMC6Q96SB8 1091 aa13.77□□□□□ -0.21
UBA3-201ENST00000349511 SMOC2Q9H3U7 446 aa13.77□□□□□ -0.21
UBA3-201ENST00000349511 PLXNA4Q9HCM2 1894 aa13.77□□□□□ -0.21
UBA3-201ENST00000349511 TLR8Q9NR97 1041 aaKnown RBP13.77□□□□□ -0.21
UBA3-201ENST00000349511 DTLQ9NZJ0 730 aa13.77□□□□□ -0.21
UBA3-201ENST00000349511 PLXNA3P51805 1871 aa13.77□□□□□ -0.21
UBA3-201ENST00000349511 FAM92AA1XBS5 289 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms