RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 NRBP2Q9NSY0 501 aa19.1■□□□□ 0.65
SCARF1-202ENST00000348987 SELENONQ9NZV5 590 aa19.1■□□□□ 0.65
SCARF1-202ENST00000348987 SLC17A6Q9P2U8 582 aa19.1■□□□□ 0.65
SCARF1-202ENST00000348987 DOCK1Q14185 1865 aa19.09■□□□□ 0.65
SCARF1-202ENST00000348987 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.09■□□□□ 0.65
SCARF1-202ENST00000348987 ARIH2O95376 493 aa19.09■□□□□ 0.65
SCARF1-202ENST00000348987 PTPN1P18031 435 aaKnown RBP19.09■□□□□ 0.65
SCARF1-202ENST00000348987 CDH5P33151 784 aaPredicted RBP19.09■□□□□ 0.65
SCARF1-202ENST00000348987 HOXD12P35452 270 aa19.09■□□□□ 0.65
SCARF1-202ENST00000348987 PPP2R5DQ14738 602 aa19.09■□□□□ 0.65
SCARF1-202ENST00000348987 SLC9B1Q4ZJI4 515 aa19.09■□□□□ 0.65
SCARF1-202ENST00000348987 ZFP1Q6P2D0 407 aa19.09■□□□□ 0.65
SCARF1-202ENST00000348987 MOB2Q70IA6 237 aa19.09■□□□□ 0.65
SCARF1-202ENST00000348987 CHERPQ8IWX8 916 aaKnown RBP19.09■□□□□ 0.65
SCARF1-202ENST00000348987 UNC5BQ8IZJ1 945 aa19.09■□□□□ 0.65
SCARF1-202ENST00000348987 SERPINI1Q99574 410 aa19.09■□□□□ 0.65
SCARF1-202ENST00000348987 NUF2Q9BZD4 464 aa19.09■□□□□ 0.65
SCARF1-202ENST00000348987 RNPEPQ9H4A4 650 aa19.09■□□□□ 0.65
SCARF1-202ENST00000348987 EBF1Q9UH73 591 aa19.09■□□□□ 0.65
SCARF1-202ENST00000348987 SSC5DA1L4H1 1573 aa19.09■□□□□ 0.65
SCARF1-202ENST00000348987 TMEM247A6NEH6 219 aa19.09■□□□□ 0.65
SCARF1-202ENST00000348987 ZBTB42B2RXF5 422 aa19.09■□□□□ 0.65
SCARF1-202ENST00000348987 PLIN3O60664 434 aa19.09■□□□□ 0.65
SCARF1-202ENST00000348987 CD151P48509 253 aa19.09■□□□□ 0.65
SCARF1-202ENST00000348987 PSMC1P62191 440 aaKnown RBP19.09■□□□□ 0.65
SCARF1-202ENST00000348987 TAP1Q03518 808 aa19.09■□□□□ 0.65
SCARF1-202ENST00000348987 ZNF423Q2M1K9 1284 aa19.09■□□□□ 0.65
SCARF1-202ENST00000348987 FSCBQ5H9T9 825 aa19.09■□□□□ 0.65
SCARF1-202ENST00000348987 SH3PXD2AQ5TCZ1 1133 aa19.09■□□□□ 0.65
SCARF1-202ENST00000348987 WDR78Q5VTH9 848 aa19.09■□□□□ 0.65
SCARF1-202ENST00000348987 LZTR1Q8N653 840 aa19.09■□□□□ 0.65
SCARF1-202ENST00000348987 DNERQ8NFT8 737 aa19.09■□□□□ 0.65
SCARF1-202ENST00000348987 DQX1Q8TE96 717 aaKnown RBP19.09■□□□□ 0.65
SCARF1-202ENST00000348987 KLC2Q9H0B6 622 aa19.09■□□□□ 0.65
SCARF1-202ENST00000348987 SDCBP2Q9H190 292 aa19.09■□□□□ 0.65
SCARF1-202ENST00000348987 BRCA1P38398 1863 aaKnown RBP19.09■□□□□ 0.65
SCARF1-202ENST00000348987 PIK3R2O00459 728 aa19.08■□□□□ 0.65
SCARF1-202ENST00000348987 KCNN4O15554 427 aa19.08■□□□□ 0.65
SCARF1-202ENST00000348987 DGKIO75912 1065 aa19.08■□□□□ 0.65
SCARF1-202ENST00000348987 MAP3K6O95382 1288 aa19.08■□□□□ 0.65
SCARF1-202ENST00000348987 H6PDO95479 791 aa19.08■□□□□ 0.65
SCARF1-202ENST00000348987 ALOX15P16050 662 aaPredicted RBP19.08■□□□□ 0.65
SCARF1-202ENST00000348987 GMPRP36959 345 aa19.08■□□□□ 0.65
SCARF1-202ENST00000348987 HALP42357 657 aa19.08■□□□□ 0.65
SCARF1-202ENST00000348987 NUP107P57740 925 aa19.08■□□□□ 0.65
SCARF1-202ENST00000348987 VGLL4Q14135 290 aa19.08■□□□□ 0.65
SCARF1-202ENST00000348987 PDCD4Q53EL6 469 aaKnown RBP19.08■□□□□ 0.65
SCARF1-202ENST00000348987 SLC15A3Q8IY34 581 aa19.08■□□□□ 0.65
SCARF1-202ENST00000348987 DSELQ8IZU8 1212 aa19.08■□□□□ 0.65
SCARF1-202ENST00000348987 AGR3Q8TD06 166 aa19.08■□□□□ 0.65
SCARF1-202ENST00000348987 KLHL32Q96NJ5 620 aa19.08■□□□□ 0.65
SCARF1-202ENST00000348987 TSPYL2Q9H2G4 693 aaPredicted RBP19.08■□□□□ 0.65
SCARF1-202ENST00000348987 PCDHGC3Q9UN70 934 aa19.08■□□□□ 0.65
SCARF1-202ENST00000348987 FAM159BA6NKW6 160 aa19.08■□□□□ 0.64
SCARF1-202ENST00000348987 FBP2O00757 339 aa19.08■□□□□ 0.64
SCARF1-202ENST00000348987 RNASEH2AO75792 299 aaKnown RBP19.08■□□□□ 0.64
SCARF1-202ENST00000348987 ALDOAP04075 364 aaKnown RBP19.08■□□□□ 0.64
SCARF1-202ENST00000348987 ERBB2P04626 1255 aa19.08■□□□□ 0.64
SCARF1-202ENST00000348987 CXCL8P10145 99 aa19.08■□□□□ 0.64
SCARF1-202ENST00000348987 ZNF24P17028 368 aa19.08■□□□□ 0.64
SCARF1-202ENST00000348987 ZNF26P17031 533 aaPredicted RBP19.08■□□□□ 0.64
SCARF1-202ENST00000348987 PRDX6P30041 224 aa19.08■□□□□ 0.64
SCARF1-202ENST00000348987 SLC5A3P53794 718 aa19.08■□□□□ 0.64
SCARF1-202ENST00000348987 CDH15P55291 814 aa19.08■□□□□ 0.64
SCARF1-202ENST00000348987 SLC10A2Q12908 348 aaPredicted RBP19.08■□□□□ 0.64
SCARF1-202ENST00000348987 PDE1CQ14123 709 aaPredicted RBP19.08■□□□□ 0.64
SCARF1-202ENST00000348987 CPNE9Q8IYJ1 553 aa19.08■□□□□ 0.64
SCARF1-202ENST00000348987 EME1Q96AY2 570 aa19.08■□□□□ 0.64
SCARF1-202ENST00000348987 VPS50Q96JG6 964 aa19.08■□□□□ 0.64
SCARF1-202ENST00000348987 COX4I2Q96KJ9 171 aa19.08■□□□□ 0.64
SCARF1-202ENST00000348987 ZNF518BQ9C0D4 1074 aa19.08■□□□□ 0.64
SCARF1-202ENST00000348987 SEMA6AQ9H2E6 1030 aa19.08■□□□□ 0.64
SCARF1-202ENST00000348987 MINDY3Q9H8M7 445 aa19.08■□□□□ 0.64
SCARF1-202ENST00000348987 ANLNQ9NQW6 1124 aa19.08■□□□□ 0.64
SCARF1-202ENST00000348987 GPRC5DQ9NZD1 345 aa19.08■□□□□ 0.64
SCARF1-202ENST00000348987 PRSS51A0A1B0GVH4 220 aa19.07■□□□□ 0.64
SCARF1-202ENST00000348987 E2F8A0AVK6 867 aa19.07■□□□□ 0.64
SCARF1-202ENST00000348987 TMX2-CTNND1H3BSU7 103 aa19.07■□□□□ 0.64
SCARF1-202ENST00000348987 TPP1O14773 563 aa19.07■□□□□ 0.64
SCARF1-202ENST00000348987 E2F6O75461 281 aa19.07■□□□□ 0.64
SCARF1-202ENST00000348987 USP2O75604 605 aaPredicted RBP19.07■□□□□ 0.64
SCARF1-202ENST00000348987 ABCE1P61221 599 aaKnown RBP19.07■□□□□ 0.64
SCARF1-202ENST00000348987 CEACAM7Q14002 265 aa19.07■□□□□ 0.64
SCARF1-202ENST00000348987 BNC2Q6ZN30 1099 aaPredicted RBP19.07■□□□□ 0.64
SCARF1-202ENST00000348987 SNX32Q86XE0 403 aa19.07■□□□□ 0.64
SCARF1-202ENST00000348987 TMEM102Q8N9M5 508 aaPredicted RBP19.07■□□□□ 0.64
SCARF1-202ENST00000348987 FAM96AQ9H5X1 160 aa19.07■□□□□ 0.64
SCARF1-202ENST00000348987 SIX4Q9UIU6 781 aa19.07■□□□□ 0.64
SCARF1-202ENST00000348987 PRPF19Q9UMS4 504 aaKnown RBP19.07■□□□□ 0.64
SCARF1-202ENST00000348987 HEY1Q9Y5J3 304 aa19.07■□□□□ 0.64
SCARF1-202ENST00000348987 ARHGEF37A1IGU5 675 aa19.07■□□□□ 0.64
SCARF1-202ENST00000348987 ADM5C9JUS6 153 aa19.07■□□□□ 0.64
SCARF1-202ENST00000348987 STX16-NPEPL1H3BU86 382 aa19.07■□□□□ 0.64
SCARF1-202ENST00000348987 XPOTO43592 962 aaKnown RBP19.07■□□□□ 0.64
SCARF1-202ENST00000348987 IQCF3P0C7M6 154 aa19.07■□□□□ 0.64
SCARF1-202ENST00000348987 TCN1P20061 433 aaPredicted RBP19.07■□□□□ 0.64
SCARF1-202ENST00000348987 RXRGP48443 463 aa19.07■□□□□ 0.64
SCARF1-202ENST00000348987 NOMO1Q15155 1222 aa19.07■□□□□ 0.64
SCARF1-202ENST00000348987 PIGGQ5H8A4 983 aa19.07■□□□□ 0.64
SCARF1-202ENST00000348987 FASTKD5Q7L8L6 764 aaKnown RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms