RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 SNX12Q9UMY4 172 aa12.48□□□□□ -0.41
TRIOBP-202ENST00000344404 OR10H1Q9Y4A9 318 aa12.48□□□□□ -0.41
TRIOBP-202ENST00000344404 RPL4P36578 427 aaKnown RBP12.48□□□□□ -0.41
TRIOBP-202ENST00000344404 COPAP53621 1224 aa12.48□□□□□ -0.41
TRIOBP-202ENST00000344404 RGMBQ6NW40 437 aa12.48□□□□□ -0.41
TRIOBP-202ENST00000344404 PSRC1Q6PGN9 363 aaPredicted RBP12.48□□□□□ -0.41
TRIOBP-202ENST00000344404 EPS8L3Q8TE67 593 aaKnown RBP12.48□□□□□ -0.41
TRIOBP-202ENST00000344404 RXFP2Q8WXD0 754 aa12.48□□□□□ -0.41
TRIOBP-202ENST00000344404 GTPBP2Q9BX10 602 aaKnown RBP12.48□□□□□ -0.41
TRIOBP-202ENST00000344404 USP15Q9Y4E8 981 aaPredicted RBP12.48□□□□□ -0.41
TRIOBP-202ENST00000344404 FAM86B1E9PN63 330 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 OGTO15294 1046 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 TSPAN9O75954 239 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 ALDH5A1P51649 535 aaPredicted RBP12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 SUZ12Q15022 739 aaKnown RBP12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 MARC1Q5VT66 337 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 TRAPPC11Q7Z392 1133 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 TXNRD3Q86VQ6 643 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 RNF31Q96EP0 1072 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 ASAH2Q9NR71 780 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 MARK1Q9P0L2 795 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 SIRPGQ9P1W8 387 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 TUBGCP4Q9UGJ1 667 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 MTO1Q9Y2Z2 717 aaKnown RBP12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 GRXCR2A6NFK2 248 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 TBL1XO60907 577 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 OR56A5P0C7T3 313 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 ARF3P61204 181 aaPredicted RBP12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 COPZ1P61923 177 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 ARF1P84077 181 aaKnown RBP12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 GNA13Q14344 377 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 TMC5Q6UXY8 1006 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 USP49Q70CQ1 688 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 TMEM176AQ96HP8 235 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 CLCC1Q96S66 551 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 HIPK3Q9H422 1215 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 AREL1O15033 823 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 SCN2BO60939 215 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 IGSF6O95976 241 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 TSPAN19P0C672 248 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 PIK3R1P27986 724 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 COILP38432 576 aaPredicted RBP12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 PKN1Q16512 942 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 CDH24Q86UP0 819 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 SYT15Q9BQS2 421 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 RIBC2Q9H4K1 309 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 AGO4Q9HCK5 861 aaKnown RBP12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 MYO10Q9HD67 2058 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 ANKDD1BA6NHY2 528 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 MTSS1O43312 755 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 KPNA6O60684 536 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 GPR15P49685 360 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 FBXO47Q5MNV8 452 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 SETD6Q8TBK2 473 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 TRNT1Q96Q11 434 aaKnown RBP12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 AGPAT3Q9NRZ7 376 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 FER1L4A9Z1Z3 1794 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 CASZ1Q86V15 1759 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 SDR42E2A6NKP2 422 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 SRGNP10124 158 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 MDH1P40925 334 aaKnown RBP12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 TFDP3Q5H9I0 405 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 MFSD7Q6UXD7 560 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 MILR1Q7Z6M3 343 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 LRRC49Q8IUZ0 686 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 TMEM138Q9NPI0 162 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 SUCOQ9UBS9 1254 aaKnown RBP12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 FAM153AQ9UHL3 310 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 TET3O43151 1660 aa12.47□□□□□ -0.41
TRIOBP-202ENST00000344404 AXIN1O15169 862 aa12.46□□□□□ -0.41
TRIOBP-202ENST00000344404 ARL3P36405 182 aa12.46□□□□□ -0.41
TRIOBP-202ENST00000344404 NDST1P52848 882 aa12.46□□□□□ -0.41
TRIOBP-202ENST00000344404 NUP107P57740 925 aa12.46□□□□□ -0.41
TRIOBP-202ENST00000344404 SPOCD1Q6ZMY3 1216 aa12.46□□□□□ -0.41
TRIOBP-202ENST00000344404 PMEPA1Q969W9 287 aa12.46□□□□□ -0.41
TRIOBP-202ENST00000344404 RERGQ96A58 199 aaPredicted RBP12.46□□□□□ -0.41
TRIOBP-202ENST00000344404 APBA2Q99767 749 aa12.46□□□□□ -0.41
TRIOBP-202ENST00000344404 C7orf25Q9BPX7 421 aa12.46□□□□□ -0.41
TRIOBP-202ENST00000344404 TMEM120AQ9BXJ8 343 aa12.46□□□□□ -0.41
TRIOBP-202ENST00000344404 VPS51Q9UID3 782 aa12.46□□□□□ -0.41
TRIOBP-202ENST00000344404 A0A0B4J269 797 aa12.46□□□□□ -0.41
TRIOBP-202ENST00000344404 NEDD8-MDP1E9PL57 170 aa12.46□□□□□ -0.41
TRIOBP-202ENST00000344404 MICAL2O94851 1124 aa12.46□□□□□ -0.41
TRIOBP-202ENST00000344404 NPTX2P47972 431 aa12.46□□□□□ -0.41
TRIOBP-202ENST00000344404 NAB2Q15742 525 aa12.46□□□□□ -0.41
TRIOBP-202ENST00000344404 SMYD1Q8NB12 490 aa12.46□□□□□ -0.41
TRIOBP-202ENST00000344404 LRRN4Q8WUT4 740 aa12.46□□□□□ -0.41
TRIOBP-202ENST00000344404 NSL1Q96IY1 281 aa12.46□□□□□ -0.41
TRIOBP-202ENST00000344404 SERPINB12Q96P63 405 aa12.46□□□□□ -0.41
TRIOBP-202ENST00000344404 TRPV2Q9Y5S1 764 aa12.46□□□□□ -0.41
TRIOBP-202ENST00000344404 ANO9A1A5B4 782 aa12.46□□□□□ -0.41
TRIOBP-202ENST00000344404 WDR27A2RRH5 827 aa12.46□□□□□ -0.41
TRIOBP-202ENST00000344404 MCIDASD6RGH6 385 aa12.46□□□□□ -0.41
TRIOBP-202ENST00000344404 BTN3A1O00481 513 aa12.46□□□□□ -0.41
TRIOBP-202ENST00000344404 IRF6O14896 467 aa12.46□□□□□ -0.41
TRIOBP-202ENST00000344404 SEPT4O43236 478 aa12.46□□□□□ -0.41
TRIOBP-202ENST00000344404 CDH16O75309 829 aa12.46□□□□□ -0.41
TRIOBP-202ENST00000344404 CFIP05156 583 aa12.46□□□□□ -0.41
TRIOBP-202ENST00000344404 ALOX12P18054 663 aa12.46□□□□□ -0.41
TRIOBP-202ENST00000344404 PUDPQ08623 228 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms