RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 ITM2CQ9NQX7 267 aa16.58■□□□□ 0.24
ATG4B-201ENST00000344376 METTL5Q9NRN9 209 aaKnown RBP16.58■□□□□ 0.24
ATG4B-201ENST00000344376 TMEM59LQ9UK28 342 aa16.58■□□□□ 0.24
ATG4B-201ENST00000344376 INTS6Q9UL03 887 aaKnown RBP16.58■□□□□ 0.24
ATG4B-201ENST00000344376 PLXND1Q9Y4D7 1925 aa16.58■□□□□ 0.24
ATG4B-201ENST00000344376 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.57■□□□□ 0.24
ATG4B-201ENST00000344376 SYCE3A1L190 88 aa16.57■□□□□ 0.24
ATG4B-201ENST00000344376 CLDN11O75508 207 aa16.57■□□□□ 0.24
ATG4B-201ENST00000344376 ADCY5O95622 1261 aa16.57■□□□□ 0.24
ATG4B-201ENST00000344376 SRPRAP08240 638 aaKnown RBP16.57■□□□□ 0.24
ATG4B-201ENST00000344376 PDGFRAP16234 1089 aa16.57■□□□□ 0.24
ATG4B-201ENST00000344376 TFE3P19532 575 aaPredicted RBP16.57■□□□□ 0.24
ATG4B-201ENST00000344376 NNMTP40261 264 aa16.57■□□□□ 0.24
ATG4B-201ENST00000344376 TPMTP51580 245 aa16.57■□□□□ 0.24
ATG4B-201ENST00000344376 ECT2LQ008S8 904 aa16.57■□□□□ 0.24
ATG4B-201ENST00000344376 CENPCQ03188 943 aa16.57■□□□□ 0.24
ATG4B-201ENST00000344376 ZBTB16Q05516 673 aa16.57■□□□□ 0.24
ATG4B-201ENST00000344376 SULT2A1Q06520 285 aa16.57■□□□□ 0.24
ATG4B-201ENST00000344376 ZNF177Q13360 481 aaPredicted RBP16.57■□□□□ 0.24
ATG4B-201ENST00000344376 CLEC16AQ2KHT3 1053 aa16.57■□□□□ 0.24
ATG4B-201ENST00000344376 TRIM61Q5EBN2 209 aa16.57■□□□□ 0.24
ATG4B-201ENST00000344376 SYCP2LQ5T4T6 812 aa16.57■□□□□ 0.24
ATG4B-201ENST00000344376 LRRC31Q6UY01 552 aa16.57■□□□□ 0.24
ATG4B-201ENST00000344376 DEFB119Q8N690 84 aa16.57■□□□□ 0.24
ATG4B-201ENST00000344376 SLC30A5Q8TAD4 765 aa16.57■□□□□ 0.24
ATG4B-201ENST00000344376 TOE1Q96GM8 510 aaKnown RBP16.57■□□□□ 0.24
ATG4B-201ENST00000344376 HSPA12BQ96MM6 686 aa16.57■□□□□ 0.24
ATG4B-201ENST00000344376 NUSAP1Q9BXS6 441 aaKnown RBP16.57■□□□□ 0.24
ATG4B-201ENST00000344376 ADAM22Q9P0K1 906 aa16.57■□□□□ 0.24
ATG4B-201ENST00000344376 EVLQ9UI08 416 aaPredicted RBP16.57■□□□□ 0.24
ATG4B-201ENST00000344376 MYO6Q9UM54 1294 aa16.57■□□□□ 0.24
ATG4B-201ENST00000344376 ERVW-1Q9UQF0 538 aa16.57■□□□□ 0.24
ATG4B-201ENST00000344376 ATXN2Q99700 1313 aaKnown RBP16.57■□□□□ 0.24
ATG4B-201ENST00000344376 RALGAPA1Q6GYQ0 2036 aa16.57■□□□□ 0.24
ATG4B-201ENST00000344376 TEX33O43247 280 aa16.56■□□□□ 0.24
ATG4B-201ENST00000344376 RNASEH1O60930 286 aaKnown RBP16.56■□□□□ 0.24
ATG4B-201ENST00000344376 SERPINC1P01008 464 aa16.56■□□□□ 0.24
ATG4B-201ENST00000344376 DNTTP04053 509 aa16.56■□□□□ 0.24
ATG4B-201ENST00000344376 CALB1P05937 261 aa16.56■□□□□ 0.24
ATG4B-201ENST00000344376 UNGP13051 313 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-201ENST00000344376 ITPKAP23677 461 aa16.56■□□□□ 0.24
ATG4B-201ENST00000344376 SDC4P31431 198 aa16.56■□□□□ 0.24
ATG4B-201ENST00000344376 DEKP35659 375 aaKnown RBP16.56■□□□□ 0.24
ATG4B-201ENST00000344376 HNRNPA1L2Q32P51 320 aaKnown RBP16.56■□□□□ 0.24
ATG4B-201ENST00000344376 TTC31Q49AM3 519 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-201ENST00000344376 WDR45BQ5MNZ6 344 aa16.56■□□□□ 0.24
ATG4B-201ENST00000344376 STPG1Q5TH74 334 aa16.56■□□□□ 0.24
ATG4B-201ENST00000344376 ZNF776Q68DI1 518 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-201ENST00000344376 CEP76Q8TAP6 659 aa16.56■□□□□ 0.24
ATG4B-201ENST00000344376 IGSF8Q969P0 613 aa16.56■□□□□ 0.24
ATG4B-201ENST00000344376 CFAP57Q96MR6 1250 aa16.56■□□□□ 0.24
ATG4B-201ENST00000344376 AGPAT1Q99943 283 aa16.56■□□□□ 0.24
ATG4B-201ENST00000344376 FUCA2Q9BTY2 467 aa16.56■□□□□ 0.24
ATG4B-201ENST00000344376 NUP58Q9BVL2 599 aa16.56■□□□□ 0.24
ATG4B-201ENST00000344376 CD93Q9NPY3 652 aa16.56■□□□□ 0.24
ATG4B-201ENST00000344376 PRSS16Q9NQE7 514 aa16.56■□□□□ 0.24
ATG4B-201ENST00000344376 WSB2Q9NYS7 404 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-201ENST00000344376 PILRBQ9UKJ0 227 aa16.56■□□□□ 0.24
ATG4B-201ENST00000344376 THADAQ6YHU6 1953 aa16.56■□□□□ 0.24
ATG4B-201ENST00000344376 MUC22E2RYF6 1773 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-201ENST00000344376 LNP1A1A4G5 178 aa16.55■□□□□ 0.24
ATG4B-201ENST00000344376 MEI4A8MW99 385 aa16.55■□□□□ 0.24
ATG4B-201ENST00000344376 IGLV3-19P01714 112 aa16.55■□□□□ 0.24
ATG4B-201ENST00000344376 GGCXP38435 758 aa16.55■□□□□ 0.24
ATG4B-201ENST00000344376 CDH4P55283 916 aa16.55■□□□□ 0.24
ATG4B-201ENST00000344376 PEAR1Q5VY43 1037 aaPredicted RBP16.55■□□□□ 0.24
ATG4B-201ENST00000344376 LRSAM1Q6UWE0 723 aa16.55■□□□□ 0.24
ATG4B-201ENST00000344376 PHF13Q86YI8 300 aaPredicted RBP16.55■□□□□ 0.24
ATG4B-201ENST00000344376 RGL4Q8IZJ4 473 aa16.55■□□□□ 0.24
ATG4B-201ENST00000344376 APCDD1Q8J025 514 aa16.55■□□□□ 0.24
ATG4B-201ENST00000344376 EMC1Q8N766 993 aa16.55■□□□□ 0.24
ATG4B-201ENST00000344376 ZNF419Q96HQ0 510 aaPredicted RBP16.55■□□□□ 0.24
ATG4B-201ENST00000344376 MRGPRX3Q96LB0 322 aa16.55■□□□□ 0.24
ATG4B-201ENST00000344376 PCDHB18PQ96TA0 734 aa16.55■□□□□ 0.24
ATG4B-201ENST00000344376 GPR174Q9BXC1 333 aa16.55■□□□□ 0.24
ATG4B-201ENST00000344376 ADAM33Q9BZ11 813 aa16.55■□□□□ 0.24
ATG4B-201ENST00000344376 RXFP3Q9NSD7 469 aa16.55■□□□□ 0.24
ATG4B-201ENST00000344376 SUSD2Q9UGT4 822 aa16.55■□□□□ 0.24
ATG4B-201ENST00000344376 ABCA7Q8IZY2 2146 aa16.55■□□□□ 0.24
ATG4B-201ENST00000344376 EDDM13A0A1B0GTR0 161 aa16.55■□□□□ 0.24
ATG4B-201ENST00000344376 A0A1W2PQC6 194 aa16.55■□□□□ 0.24
ATG4B-201ENST00000344376 DCDC2BA2VCK2 349 aa16.55■□□□□ 0.24
ATG4B-201ENST00000344376 PATE3B3GLJ2 98 aa16.55■□□□□ 0.24
ATG4B-201ENST00000344376 CFIP05156 583 aa16.55■□□□□ 0.24
ATG4B-201ENST00000344376 CTSOP43234 321 aaPredicted RBP16.55■□□□□ 0.24
ATG4B-201ENST00000344376 PLK1P53350 603 aa16.55■□□□□ 0.24
ATG4B-201ENST00000344376 ATP11AP98196 1134 aa16.55■□□□□ 0.24
ATG4B-201ENST00000344376 SFSWAPQ12872 951 aaKnown RBP16.55■□□□□ 0.24
ATG4B-201ENST00000344376 ARID5BQ14865 1188 aa16.55■□□□□ 0.24
ATG4B-201ENST00000344376 IQCB1Q15051 598 aa16.55■□□□□ 0.24
ATG4B-201ENST00000344376 DUOXA1Q1HG43 343 aa16.55■□□□□ 0.24
ATG4B-201ENST00000344376 ARL13BQ3SXY8 428 aa16.55■□□□□ 0.24
ATG4B-201ENST00000344376 C5orf22Q49AR2 442 aa16.55■□□□□ 0.24
ATG4B-201ENST00000344376 CXorf57Q6NSI4 855 aaKnown RBP16.55■□□□□ 0.24
ATG4B-201ENST00000344376 PPP1R2P3Q6NXS1 205 aa16.55■□□□□ 0.24
ATG4B-201ENST00000344376 C14orf80Q86SX3 495 aa16.55■□□□□ 0.24
ATG4B-201ENST00000344376 SLC41A1Q8IVJ1 513 aa16.55■□□□□ 0.24
ATG4B-201ENST00000344376 CADM4Q8NFZ8 388 aa16.55■□□□□ 0.24
ATG4B-201ENST00000344376 MYO19Q96H55 970 aa16.55■□□□□ 0.24
ATG4B-201ENST00000344376 C1orf74Q96LT6 269 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms