RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 CDH17Q12864 832 aa11.12□□□□□ -0.63
RPL28-201ENST00000344063 MAPRE1Q15691 268 aaKnown RBP11.12□□□□□ -0.63
RPL28-201ENST00000344063 TRIM60Q495X7 471 aa11.12□□□□□ -0.63
RPL28-201ENST00000344063 RALGPS1Q5JS13 557 aa11.12□□□□□ -0.63
RPL28-201ENST00000344063 ZFP1Q6P2D0 407 aa11.12□□□□□ -0.63
RPL28-201ENST00000344063 BNIPLQ7Z465 357 aa11.12□□□□□ -0.63
RPL28-201ENST00000344063 SHCBP1Q8NEM2 672 aa11.12□□□□□ -0.63
RPL28-201ENST00000344063 ZNF555Q8NEP9 628 aa11.12□□□□□ -0.63
RPL28-201ENST00000344063 TRAPPC12Q8WVT3 735 aa11.12□□□□□ -0.63
RPL28-201ENST00000344063 BSNDQ8WZ55 320 aa11.12□□□□□ -0.63
RPL28-201ENST00000344063 GLMNQ92990 594 aa11.12□□□□□ -0.63
RPL28-201ENST00000344063 SPATA13Q96N96 652 aa11.12□□□□□ -0.63
RPL28-201ENST00000344063 ZNF670Q9BS34 389 aa11.12□□□□□ -0.63
RPL28-201ENST00000344063 TUT1Q9H6E5 874 aaKnown RBP11.12□□□□□ -0.63
RPL28-201ENST00000344063 CCDC167Q9P0B6 97 aa11.12□□□□□ -0.63
RPL28-201ENST00000344063 TRHDEQ9UKU6 1024 aa11.12□□□□□ -0.63
RPL28-201ENST00000344063 COL14A1Q05707 1796 aaKnown RBP11.12□□□□□ -0.63
RPL28-201ENST00000344063 PLSCR1O15162 318 aa11.12□□□□□ -0.63
RPL28-201ENST00000344063 BIRC5O15392 142 aa11.12□□□□□ -0.63
RPL28-201ENST00000344063 RBP1P09455 135 aa11.12□□□□□ -0.63
RPL28-201ENST00000344063 PSMA4P25789 261 aaKnown RBP11.12□□□□□ -0.63
RPL28-201ENST00000344063 NUMBP49757 651 aa11.12□□□□□ -0.63
RPL28-201ENST00000344063 NAA20P61599 178 aa11.12□□□□□ -0.63
RPL28-201ENST00000344063 CBX3Q13185 183 aa11.12□□□□□ -0.63
RPL28-201ENST00000344063 BFSP2Q13515 415 aa11.12□□□□□ -0.63
RPL28-201ENST00000344063 MPP2Q14168 576 aa11.12□□□□□ -0.63
RPL28-201ENST00000344063 C6orf52Q5T4I8 152 aa11.12□□□□□ -0.63
RPL28-201ENST00000344063 ZNF554Q86TJ5 538 aa11.12□□□□□ -0.63
RPL28-201ENST00000344063 FBXW8Q8N3Y1 598 aa11.12□□□□□ -0.63
RPL28-201ENST00000344063 RIN3Q8TB24 985 aa11.12□□□□□ -0.63
RPL28-201ENST00000344063 C10orf82Q8WW14 230 aa11.12□□□□□ -0.63
RPL28-201ENST00000344063 STN1Q9H668 368 aaKnown RBP11.12□□□□□ -0.63
RPL28-201ENST00000344063 DNAAF2Q9NVR5 837 aaKnown RBP11.12□□□□□ -0.63
RPL28-201ENST00000344063 PNPOQ9NVS9 261 aa11.12□□□□□ -0.63
RPL28-201ENST00000344063 ZNF142P52746 1687 aaPredicted RBP11.12□□□□□ -0.63
RPL28-201ENST00000344063 TM7SF2O76062 418 aa11.12□□□□□ -0.63
RPL28-201ENST00000344063 SUPT7LO94864 414 aa11.12□□□□□ -0.63
RPL28-201ENST00000344063 NR1H2P55055 460 aa11.12□□□□□ -0.63
RPL28-201ENST00000344063 TIGD7Q6NT04 549 aaPredicted RBP11.12□□□□□ -0.63
RPL28-201ENST00000344063 ABHD15Q6UXT9 468 aa11.12□□□□□ -0.63
RPL28-201ENST00000344063 EBNA1BP2Q99848 306 aaKnown RBP11.12□□□□□ -0.63
RPL28-201ENST00000344063 NTPCRQ9BSD7 190 aaKnown RBP11.12□□□□□ -0.63
RPL28-201ENST00000344063 SNRNP25Q9BV90 132 aaKnown RBP11.12□□□□□ -0.63
RPL28-201ENST00000344063 CDT1Q9H211 546 aa11.12□□□□□ -0.63
RPL28-201ENST00000344063 UBP1Q9NZI7 540 aa11.12□□□□□ -0.63
RPL28-201ENST00000344063 SELENONQ9NZV5 590 aa11.12□□□□□ -0.63
RPL28-201ENST00000344063 NR5A2O00482 541 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 MAP3K13O43283 966 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 UNGP13051 313 aaPredicted RBP11.11□□□□□ -0.63
RPL28-201ENST00000344063 CCDC130P13994 396 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 CDKN2BP42772 138 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 CACNB2Q08289 660 aaPredicted RBP11.11□□□□□ -0.63
RPL28-201ENST00000344063 TAF5Q15542 800 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 UBAP2Q5T6F2 1119 aaKnown RBP11.11□□□□□ -0.63
RPL28-201ENST00000344063 CATSPERGQ6ZRH7 1159 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 UNC93AQ86WB7 457 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 PLEKHG4BQ96PX9 1271 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 CACYBPQ9HB71 228 aaKnown RBP11.11□□□□□ -0.63
RPL28-201ENST00000344063 KIF17Q9P2E2 1029 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 RSL24D1Q9UHA3 163 aaKnown RBP11.11□□□□□ -0.63
RPL28-201ENST00000344063 MYPNQ86TC9 1320 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 KLHL33A6NCF5 533 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 ERI2A8K979 691 aaKnown RBP11.11□□□□□ -0.63
RPL28-201ENST00000344063 TBC1D4O60343 1298 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 USP12O75317 370 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 COX4I1P13073 169 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 KCNK10P57789 538 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 RNASEH2BQ5TBB1 312 aaKnown RBP11.11□□□□□ -0.63
RPL28-201ENST00000344063 KCNMB4Q86W47 210 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 TNS4Q8IZW8 715 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 SLC44A1Q8WWI5 657 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 RIC8BQ9NVN3 520 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 BLOC1S6Q9UL45 172 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 A0A1B0GVG6 124 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 TKTL1P51854 596 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 PTPN20Q4JDL3 420 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 VWA5B1Q5TIE3 1220 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 GPR107Q5VW38 600 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 SLC27A1Q6PCB7 646 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 TMC5Q6UXY8 1006 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 FAM183BPQ6ZVS7 135 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 TAS2R42Q7RTR8 314 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 DEFB106AQ8N104 65 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 JOSD2Q8TAC2 188 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 DCUN1D1Q96GG9 259 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 ZFYVE19Q96K21 471 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 VAT1Q99536 393 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 EIF2AQ9BY44 585 aaKnown RBP11.11□□□□□ -0.63
RPL28-201ENST00000344063 ASPSCR1Q9BZE9 553 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 WDR41Q9HAD4 459 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 XPNPEP3Q9NQH7 507 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 SNTG2Q9NY99 539 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 RGPD5Q99666 1765 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 ZNF839A8K0R7 811 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 TPP1O14773 563 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 NFICP08651 508 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 SLC2A3P11169 496 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 ECHS1P30084 290 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 HOXD13P35453 343 aa11.11□□□□□ -0.63
RPL28-201ENST00000344063 WASHC5Q12768 1159 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms