RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 ZNF317Q96PQ6 595 aaPredicted RBP7.58□□□□□ -1.2
ZNF540-202ENST00000343599 ECT2Q9H8V3 914 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 PLCB1Q9NQ66 1216 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 GDF3Q9NR23 364 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 TDP1Q9NUW8 608 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 KIAA1257Q9ULG3 409 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 FAM237AA0A1B0GTK4 181 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 MYMKA6NI61 221 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 SIGLEC16A6NMB1 481 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 ENC1O14682 589 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 ACTN4O43707 911 aaKnown RBP7.58□□□□□ -1.2
ZNF540-202ENST00000343599 CD59P13987 128 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 MTTPP55157 894 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 ARPC4P59998 168 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 PPP2R2AP63151 447 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 RCN1Q15293 331 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 CTXN3Q4LDR2 81 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 AGBL2Q5U5Z8 902 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 NEPROQ6NW34 567 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 FAM117BQ6P1L5 589 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 ZNF783Q6ZMS7 281 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 MAEAQ7L5Y9 396 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 TMEM150AQ86TG1 271 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 ANKRD13BQ86YJ7 626 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 KIAA2013Q8IYS2 634 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 DNAJC9Q8WXX5 260 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 CAPZA3Q96KX2 299 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 GBP5Q96PP8 586 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 EDEM2Q9BV94 578 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 FBXO44Q9H4M3 255 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 NKX1-2Q9UD57 310 aaPredicted RBP7.58□□□□□ -1.2
ZNF540-202ENST00000343599 CHMP2BQ9UQN3 213 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 LRCH1Q9Y2L9 728 aa7.58□□□□□ -1.2
ZNF540-202ENST00000343599 REXO2Q9Y3B8 237 aaKnown RBP7.58□□□□□ -1.2
ZNF540-202ENST00000343599 CCDC162PA2VCL2 907 aa7.57□□□□□ -1.2
ZNF540-202ENST00000343599 ARHGEF35A5YM69 484 aa7.57□□□□□ -1.2
ZNF540-202ENST00000343599 NDUFB5O43674 189 aa7.57□□□□□ -1.2
ZNF540-202ENST00000343599 PRLRP16471 622 aa7.57□□□□□ -1.2
ZNF540-202ENST00000343599 VAV2P52735 878 aa7.57□□□□□ -1.2
ZNF540-202ENST00000343599 CACNA2D1P54289 1103 aa7.57□□□□□ -1.2
ZNF540-202ENST00000343599 CDK17Q00537 523 aa7.57□□□□□ -1.2
ZNF540-202ENST00000343599 TSPY1Q01534 308 aa7.57□□□□□ -1.2
ZNF540-202ENST00000343599 BNIP1Q12981 228 aa7.57□□□□□ -1.2
ZNF540-202ENST00000343599 SAFBQ15424 915 aaKnown RBP eCLIP7.57□□□□□ -1.2
ZNF540-202ENST00000343599 ERMARDQ5T6L9 678 aa7.57□□□□□ -1.2
ZNF540-202ENST00000343599 MSANTD2Q6P1R3 559 aa7.57□□□□□ -1.2
ZNF540-202ENST00000343599 KLC3Q6P597 504 aa7.57□□□□□ -1.2
ZNF540-202ENST00000343599 PDZD3Q86UT5 571 aa7.57□□□□□ -1.2
ZNF540-202ENST00000343599 CREG2Q8IUH2 290 aa7.57□□□□□ -1.2
ZNF540-202ENST00000343599 CHFRQ96EP1 664 aa7.57□□□□□ -1.2
ZNF540-202ENST00000343599 MAK16Q9BXY0 300 aaKnown RBP7.57□□□□□ -1.2
ZNF540-202ENST00000343599 ASNSD1Q9NWL6 643 aa7.57□□□□□ -1.2
ZNF540-202ENST00000343599 KCTD5Q9NXV2 234 aa7.57□□□□□ -1.2
ZNF540-202ENST00000343599 TELO2Q9Y4R8 837 aa7.57□□□□□ -1.2
ZNF540-202ENST00000343599 PCDHGA7Q9Y5G6 932 aa7.57□□□□□ -1.2
ZNF540-202ENST00000343599 SCN8AQ9UQD0 1980 aa7.57□□□□□ -1.2
ZNF540-202ENST00000343599 MAGEA13PA6NCF6 341 aa7.57□□□□□ -1.2
ZNF540-202ENST00000343599 SPATA31D3P0C874 917 aa7.57□□□□□ -1.2
ZNF540-202ENST00000343599 TPBGLP0DKB5 382 aa7.57□□□□□ -1.2
ZNF540-202ENST00000343599 PFKFB1P16118 471 aa7.57□□□□□ -1.2
ZNF540-202ENST00000343599 HSPA9P38646 679 aaKnown RBP7.57□□□□□ -1.2
ZNF540-202ENST00000343599 MRPS25P82663 173 aaKnown RBP7.57□□□□□ -1.2
ZNF540-202ENST00000343599 INAQ16352 499 aa7.57□□□□□ -1.2
ZNF540-202ENST00000343599 FAAH2Q6GMR7 532 aa7.57□□□□□ -1.2
ZNF540-202ENST00000343599 SPATA31D4Q6ZUB0 917 aa7.57□□□□□ -1.2
ZNF540-202ENST00000343599 KBTBD6Q86V97 674 aa7.57□□□□□ -1.2
ZNF540-202ENST00000343599 SCUBE1Q8IWY4 988 aa7.57□□□□□ -1.2
ZNF540-202ENST00000343599 CRYBG2Q8N1P7 616 aa7.57□□□□□ -1.2
ZNF540-202ENST00000343599 TRIML1Q8N9V2 468 aa7.57□□□□□ -1.2
ZNF540-202ENST00000343599 UCMAQ8WVF2 138 aa7.57□□□□□ -1.2
ZNF540-202ENST00000343599 ZCCHC14Q8WYQ9 949 aaKnown RBP7.57□□□□□ -1.2
ZNF540-202ENST00000343599 HNRNPABQ99729 332 aaKnown RBP7.57□□□□□ -1.2
ZNF540-202ENST00000343599 FAM129AQ9BZQ8 928 aa7.57□□□□□ -1.2
ZNF540-202ENST00000343599 MRPL46Q9H2W6 279 aaKnown RBP7.57□□□□□ -1.2
ZNF540-202ENST00000343599 CNOT10Q9H9A5 744 aaKnown RBP7.57□□□□□ -1.2
ZNF540-202ENST00000343599 RABL2AQ9UBK7 228 aaPredicted RBP7.57□□□□□ -1.2
ZNF540-202ENST00000343599 DNM3Q9UQ16 869 aa7.57□□□□□ -1.2
ZNF540-202ENST00000343599 HPSEQ9Y251 543 aa7.57□□□□□ -1.2
ZNF540-202ENST00000343599 HBS1LQ9Y450 684 aaKnown RBP7.57□□□□□ -1.2
ZNF540-202ENST00000343599 CHD9Q3L8U1 2897 aa7.57□□□□□ -1.2
ZNF540-202ENST00000343599 ZNF106Q9H2Y7 1883 aaKnown RBP7.56□□□□□ -1.2
ZNF540-202ENST00000343599 K7ERI5 159 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 VILLO15195 856 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 CAPN5O15484 640 aaPredicted RBP7.56□□□□□ -1.2
ZNF540-202ENST00000343599 SEC24AO95486 1093 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 CYP1A1P04798 512 aaPredicted RBP7.56□□□□□ -1.2
ZNF540-202ENST00000343599 NAT2P11245 290 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 HPDP32754 393 aaPredicted RBP7.56□□□□□ -1.2
ZNF540-202ENST00000343599 OR1D2P34982 312 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 COPS2P61201 443 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 PDE1BQ01064 536 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 RING1Q06587 406 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 ZNF252P-AS1Q0IIN9 211 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 SLC10A6Q3KNW5 377 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 SLC45A4Q5BKX6 768 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 SLC2A7Q6PXP3 512 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 TAS1R3Q7RTX0 852 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 RBM23Q86U06 439 aaKnown RBP7.56□□□□□ -1.2
ZNF540-202ENST00000343599 TRIM69Q86WT6 500 aa7.56□□□□□ -1.2
ZNF540-202ENST00000343599 CATSPER3Q86XQ3 398 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms