RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 CBX4O00257 560 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 SLC2A3P11169 496 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 ALADP13716 330 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 YBX3P16989 372 aaKnown RBP eCLIP8.23□□□□□ -1.092e-6■□□□□ 8.5
UBE4B-202ENST00000343090 CCR1P32246 355 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 ALDH1A3P47895 512 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 LHX1P48742 406 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 PKNOX1P55347 436 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 GRTP1Q5TC63 336 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 TIGD7Q6NT04 549 aaPredicted RBP8.23□□□□□ -1.09
UBE4B-202ENST00000343090 RFWD3Q6PCD5 774 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 SATL1Q86VE3 508 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 SLC9A9Q8IVB4 645 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 TMEM79Q9BSE2 394 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 ARL8BQ9NVJ2 186 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 CIDEBQ9UHD4 219 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 KCNH4Q9UQ05 1017 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 FAM32AQ9Y421 112 aaKnown RBP8.23□□□□□ -1.09
UBE4B-202ENST00000343090 PDHXO00330 501 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 GSC2O15499 205 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 TRIM13O60858 407 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 VPS26AO75436 327 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 PARNO95453 639 aaKnown RBP8.23□□□□□ -1.09
UBE4B-202ENST00000343090 APOA1P02647 267 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 ITGA2BP08514 1039 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 MZF1P28698 734 aaPredicted RBP8.23□□□□□ -1.09
UBE4B-202ENST00000343090 SLC11A2P49281 568 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 CDH17Q12864 832 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 SPRED3Q2MJR0 410 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 HYIQ5T013 277 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 GJC2Q5T442 439 aaPredicted RBP8.23□□□□□ -1.09
UBE4B-202ENST00000343090 C9orf131Q5VYM1 1079 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 PKN3Q6P5Z2 889 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 OR52K1Q8NGK4 314 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 SCUBE2Q9NQ36 999 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 KPNA4O00629 521 aaPredicted RBP8.23□□□□□ -1.09
UBE4B-202ENST00000343090 PLA2G6O60733 806 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 GLP2RO95838 553 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 DLGAP3O95886 979 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 TRUB2O95900 331 aaKnown RBP8.23□□□□□ -1.09
UBE4B-202ENST00000343090 ALDH1A1P00352 501 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 ASS1P00966 412 aaKnown RBP8.23□□□□□ -1.09
UBE4B-202ENST00000343090 MAGEA8P43361 318 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 TUBP50607 506 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 OXCT1P55809 520 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 NPY5RQ15761 445 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 C11orf96Q7Z7L8 435 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 C12orf29Q8N999 325 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 FOPNLQ96NB1 174 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 COQ7Q99807 217 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 BCAS3Q9H6U6 928 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.23□□□□□ -1.09
UBE4B-202ENST00000343090 DMTF1Q9Y222 760 aa8.23□□□□□ -1.09
UBE4B-202ENST00000343090 ASTN2O75129 1339 aaPredicted RBP8.22□□□□□ -1.09
UBE4B-202ENST00000343090 CFAP99D6REC4 459 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 RECQL4O94761 1208 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 LGALS2P05162 132 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 MPOP05164 745 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 CD151P48509 253 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 OAZ1P54368 228 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 SLC25A3Q00325 362 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 FOLH1Q04609 750 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 LPIN1Q14693 890 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 RIN3Q8TB24 985 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 CCDC126Q96EE4 140 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 RMND5BQ96G75 393 aaPredicted RBP8.22□□□□□ -1.09
UBE4B-202ENST00000343090 FAR2Q96K12 515 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 CDRT15Q96T59 188 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 SEPHS2Q99611 448 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 SNRNP25Q9BV90 132 aaKnown RBP8.22□□□□□ -1.09
UBE4B-202ENST00000343090 ULBP1Q9BZM6 244 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 EXOSC4Q9NPD3 245 aaKnown RBP8.22□□□□□ -1.09
UBE4B-202ENST00000343090 TIMMDC1Q9NPL8 285 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 PDGFCQ9NRA1 345 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 TEKT2Q9UIF3 430 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 MRC1P22897 1456 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 hCG_1818297A0A087WSY0 165 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 M0R3G1 203 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 FSCN2O14926 492 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 KATNA1O75449 491 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 UQCRBP14927 111 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 ALOX15P16050 662 aaPredicted RBP8.22□□□□□ -1.09
UBE4B-202ENST00000343090 ATP6V1B2P21281 511 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 MARSP56192 900 aaKnown RBP8.22□□□□□ -1.09
UBE4B-202ENST00000343090 ITGADQ13349 1161 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 VGLL4Q14135 290 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 LPCAT4Q643R3 524 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 ZBTB49Q6ZSB9 765 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 MECRQ9BV79 373 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 TKTL2Q9H0I9 626 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 SEMA6AQ9H2E6 1030 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 RNPEPQ9H4A4 650 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 BLOC1S6Q9UL45 172 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 AK5Q9Y6K8 562 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 PEAK1Q9H792 1746 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 EVPLLA8MZ36 301 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 GUCA1CO95843 209 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 RBP1P09455 135 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 TMEM132BQ14DG7 1078 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 PDK4Q16654 411 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms