RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 PSME2Q9UL46 239 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 EMCNQ9ULC0 261 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 SATB2Q9UPW6 733 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 FOCADQ5VW36 1801 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 TISP43B9A030 160 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 APOC4-APOC2K7ER74 178 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 M0QX08 132 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 CFLARO15519 480 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 H2AFYO75367 372 aaKnown RBP18.93■□□□□ 0.62
SMPD1-201ENST00000342245 PSMD10O75832 226 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 APOC2P02655 101 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 BMP2P12643 396 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 TCF4P15884 667 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 SERPINB5P36952 375 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 PKNOX1P55347 436 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 NSUN2Q08J23 767 aaKnown RBP eCLIP18.93■□□□□ 0.62
SMPD1-201ENST00000342245 MTM1Q13496 603 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 SLC51AQ86UW1 340 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 CAMK1DQ8IU85 385 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.93■□□□□ 0.62
SMPD1-201ENST00000342245 MFSD14AQ96MC6 490 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 PAK5Q9P286 719 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 POU2F3Q9UKI9 436 aa18.93■□□□□ 0.62
SMPD1-201ENST00000342245 MYH9P35579 1960 aaKnown RBP18.93■□□□□ 0.62
SMPD1-201ENST00000342245 CSH1P0DML2 217 aa18.92■□□□□ 0.62
SMPD1-201ENST00000342245 CSH2P0DML3 217 aa18.92■□□□□ 0.62
SMPD1-201ENST00000342245 ENO3P13929 434 aaPredicted RBP18.92■□□□□ 0.62
SMPD1-201ENST00000342245 ZNF182P17025 639 aaPredicted RBP18.92■□□□□ 0.62
SMPD1-201ENST00000342245 KCNA4P22459 653 aa18.92■□□□□ 0.62
SMPD1-201ENST00000342245 KRT6CP48668 564 aa18.92■□□□□ 0.62
SMPD1-201ENST00000342245 SELENBP1Q13228 472 aa18.92■□□□□ 0.62
SMPD1-201ENST00000342245 TRIM25Q14258 630 aaKnown RBP18.92■□□□□ 0.62
SMPD1-201ENST00000342245 WDR44Q5JSH3 913 aa18.92■□□□□ 0.62
SMPD1-201ENST00000342245 WDR11Q9BZH6 1224 aa18.92■□□□□ 0.62
SMPD1-201ENST00000342245 SEMA6AQ9H2E6 1030 aa18.92■□□□□ 0.62
SMPD1-201ENST00000342245 NANOGQ9H9S0 305 aa18.92■□□□□ 0.62
SMPD1-201ENST00000342245 RPS8P62241 208 aaKnown RBP18.92■□□□□ 0.62
SMPD1-201ENST00000342245 RPL7AP62424 266 aaKnown RBP18.92■□□□□ 0.62
SMPD1-201ENST00000342245 DYNLT1P63172 113 aa18.92■□□□□ 0.62
SMPD1-201ENST00000342245 PRAMEP78395 509 aa18.92■□□□□ 0.62
SMPD1-201ENST00000342245 INTS11Q5TA45 600 aaKnown RBP18.92■□□□□ 0.62
SMPD1-201ENST00000342245 DNAJC24Q6P3W2 148 aa18.92■□□□□ 0.62
SMPD1-201ENST00000342245 DCUN1D2Q6PH85 259 aa18.92■□□□□ 0.62
SMPD1-201ENST00000342245 SV2AQ7L0J3 742 aa18.92■□□□□ 0.62
SMPD1-201ENST00000342245 BPHLQ86WA6 291 aaPredicted RBP18.92■□□□□ 0.62
SMPD1-201ENST00000342245 ANKRD13BQ86YJ7 626 aa18.92■□□□□ 0.62
SMPD1-201ENST00000342245 CBWD2Q8IUF1 395 aa18.92■□□□□ 0.62
SMPD1-201ENST00000342245 ZC3H7AQ8IWR0 971 aaKnown RBP18.92■□□□□ 0.62
SMPD1-201ENST00000342245 SNX31Q8N9S9 440 aa18.92■□□□□ 0.62
SMPD1-201ENST00000342245 FNIP1Q8TF40 1166 aa18.92■□□□□ 0.62
SMPD1-201ENST00000342245 SLC7A3Q8WY07 619 aa18.92■□□□□ 0.62
SMPD1-201ENST00000342245 RCN3Q96D15 328 aa18.92■□□□□ 0.62
SMPD1-201ENST00000342245 MED30Q96HR3 178 aa18.92■□□□□ 0.62
SMPD1-201ENST00000342245 SLC29A1Q99808 456 aa18.92■□□□□ 0.62
SMPD1-201ENST00000342245 AMNQ9BXJ7 453 aa18.92■□□□□ 0.62
SMPD1-201ENST00000342245 SNX13Q9Y5W8 968 aa18.92■□□□□ 0.62
SMPD1-201ENST00000342245 HMX2A2RU54 273 aa18.91■□□□□ 0.62
SMPD1-201ENST00000342245 TTC34A8MYJ7 566 aa18.91■□□□□ 0.62
SMPD1-201ENST00000342245 PLOD2O00469 737 aa18.91■□□□□ 0.62
SMPD1-201ENST00000342245 ZBTB39O15060 712 aa18.91■□□□□ 0.62
SMPD1-201ENST00000342245 PAPSS1O43252 624 aaPredicted RBP18.91■□□□□ 0.62
SMPD1-201ENST00000342245 MMP8P22894 467 aa18.91■□□□□ 0.62
SMPD1-201ENST00000342245 POLR2BP30876 1174 aaKnown RBP18.91■□□□□ 0.62
SMPD1-201ENST00000342245 HADHQ16836 314 aaKnown RBP18.91■□□□□ 0.62
SMPD1-201ENST00000342245 ABRAXAS1Q6UWZ7 409 aa18.91■□□□□ 0.62
SMPD1-201ENST00000342245 KCTD1Q719H9 257 aa18.91■□□□□ 0.62
SMPD1-201ENST00000342245 TXNRD3Q86VQ6 643 aa18.91■□□□□ 0.62
SMPD1-201ENST00000342245 C10orf107Q8IVU9 208 aa18.91■□□□□ 0.62
SMPD1-201ENST00000342245 OR13F1Q8NGS4 319 aa18.91■□□□□ 0.62
SMPD1-201ENST00000342245 TCF12Q99081 682 aa18.91■□□□□ 0.62
SMPD1-201ENST00000342245 SMYD2Q9NRG4 433 aa18.91■□□□□ 0.62
SMPD1-201ENST00000342245 COPG2Q9UBF2 871 aa18.91■□□□□ 0.62
SMPD1-201ENST00000342245 TRAF6Q9Y4K3 522 aa18.91■□□□□ 0.62
SMPD1-201ENST00000342245 F8VP50 259 aa18.91■□□□□ 0.62
SMPD1-201ENST00000342245 CPNE6O95741 557 aa18.91■□□□□ 0.62
SMPD1-201ENST00000342245 AKR1B1P15121 316 aa18.91■□□□□ 0.62
SMPD1-201ENST00000342245 JUNBP17275 347 aaPredicted RBP18.91■□□□□ 0.62
SMPD1-201ENST00000342245 ROR1Q01973 937 aa18.91■□□□□ 0.62
SMPD1-201ENST00000342245 ZNF252P-AS1Q0IIN9 211 aa18.91■□□□□ 0.62
SMPD1-201ENST00000342245 PTK2BQ14289 1009 aa18.91■□□□□ 0.62
SMPD1-201ENST00000342245 MTX3Q5HYI7 312 aa18.91■□□□□ 0.62
SMPD1-201ENST00000342245 SLX4IPQ5VYV7 408 aa18.91■□□□□ 0.62
SMPD1-201ENST00000342245 PADI6Q6TGC4 694 aa18.91■□□□□ 0.62
SMPD1-201ENST00000342245 DPP8Q6V1X1 898 aaPredicted RBP18.91■□□□□ 0.62
SMPD1-201ENST00000342245 KCTD8Q6ZWB6 473 aa18.91■□□□□ 0.62
SMPD1-201ENST00000342245 TAB3Q8N5C8 712 aaPredicted RBP18.91■□□□□ 0.62
SMPD1-201ENST00000342245 ZC3H15Q8WU90 426 aaKnown RBP18.91■□□□□ 0.62
SMPD1-201ENST00000342245 DEPDC1BQ8WUY9 529 aa18.91■□□□□ 0.62
SMPD1-201ENST00000342245 USP13Q92995 863 aaPredicted RBP18.91■□□□□ 0.62
SMPD1-201ENST00000342245 RAD21L1Q9H4I0 556 aa18.91■□□□□ 0.62
SMPD1-201ENST00000342245 MRGBPQ9NV56 204 aa18.91■□□□□ 0.62
SMPD1-201ENST00000342245 CRNNQ9UBG3 495 aaPredicted RBP18.91■□□□□ 0.62
SMPD1-201ENST00000342245 ITM2BQ9Y287 266 aa18.91■□□□□ 0.62
SMPD1-201ENST00000342245 NRAPQ86VF7 1730 aa18.9■□□□□ 0.62
SMPD1-201ENST00000342245 IGLV3-22A0A075B6J6 115 aa18.9■□□□□ 0.62
SMPD1-201ENST00000342245 GOLGA8CPA6NN73 597 aa18.9■□□□□ 0.62
SMPD1-201ENST00000342245 VAPBO95292 243 aa18.9■□□□□ 0.62
SMPD1-201ENST00000342245 HSPA4LO95757 839 aa18.9■□□□□ 0.62
SMPD1-201ENST00000342245 CALCAP01258 141 aa18.9■□□□□ 0.62
SMPD1-201ENST00000342245 GNA15P30679 374 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms