RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 OLFM3Q96PB7 478 aa17.83■□□□□ 0.44
CLDN4-201ENST00000340958 ACBD3Q9H3P7 528 aa17.83■□□□□ 0.44
CLDN4-201ENST00000340958 IL21Q9HBE4 155 aa17.83■□□□□ 0.44
CLDN4-201ENST00000340958 USP29Q9HBJ7 922 aa17.83■□□□□ 0.44
CLDN4-201ENST00000340958 CLUHO75153 1309 aa17.83■□□□□ 0.44
CLDN4-201ENST00000340958 GOLGA6L7A0A1B0GV03 622 aa17.82■□□□□ 0.44
CLDN4-201ENST00000340958 A0A1W2PRU2 124 aa17.82■□□□□ 0.44
CLDN4-201ENST00000340958 ACSL4O60488 711 aa17.82■□□□□ 0.44
CLDN4-201ENST00000340958 ZNF189O75820 626 aaPredicted RBP17.82■□□□□ 0.44
CLDN4-201ENST00000340958 CKMP06732 381 aa17.82■□□□□ 0.44
CLDN4-201ENST00000340958 TACR2P21452 398 aa17.82■□□□□ 0.44
CLDN4-201ENST00000340958 IVDP26440 423 aa17.82■□□□□ 0.44
CLDN4-201ENST00000340958 NRLP54845 237 aa17.82■□□□□ 0.44
CLDN4-201ENST00000340958 MANEALQ5VSG8 457 aa17.82■□□□□ 0.44
CLDN4-201ENST00000340958 FBXL22Q6P050 247 aa17.82■□□□□ 0.44
CLDN4-201ENST00000340958 ARHGEF18Q6ZSZ5 1173 aa17.82■□□□□ 0.44
CLDN4-201ENST00000340958 GAREM2Q75VX8 874 aa17.82■□□□□ 0.44
CLDN4-201ENST00000340958 MAB21L3Q8N8X9 362 aa17.82■□□□□ 0.44
CLDN4-201ENST00000340958 MRPL38Q96DV4 380 aaKnown RBP17.82■□□□□ 0.44
CLDN4-201ENST00000340958 FUT8Q9BYC5 575 aa17.82■□□□□ 0.44
CLDN4-201ENST00000340958 BRD8Q9H0E9 1235 aa17.82■□□□□ 0.44
CLDN4-201ENST00000340958 LMCD1Q9NZU5 365 aa17.82■□□□□ 0.44
CLDN4-201ENST00000340958 PRDM4Q9UKN5 801 aa17.82■□□□□ 0.44
CLDN4-201ENST00000340958 ATP8A1Q9Y2Q0 1164 aa17.82■□□□□ 0.44
CLDN4-201ENST00000340958 TRAV19A0A0A6YYK7 116 aa17.82■□□□□ 0.44
CLDN4-201ENST00000340958 STC2O76061 302 aa17.82■□□□□ 0.44
CLDN4-201ENST00000340958 FGF19O95750 216 aa17.82■□□□□ 0.44
CLDN4-201ENST00000340958 PTPN2P17706 415 aa17.82■□□□□ 0.44
CLDN4-201ENST00000340958 HOXC13P31276 330 aa17.82■□□□□ 0.44
CLDN4-201ENST00000340958 TFAP2DQ7Z6R9 452 aa17.82■□□□□ 0.44
CLDN4-201ENST00000340958 ZNF354CQ86Y25 554 aa17.82■□□□□ 0.44
CLDN4-201ENST00000340958 TMC8Q8IU68 726 aa17.82■□□□□ 0.44
CLDN4-201ENST00000340958 LGI2Q8N0V4 545 aa17.82■□□□□ 0.44
CLDN4-201ENST00000340958 RTL3Q8N8U3 475 aaKnown RBP17.82■□□□□ 0.44
CLDN4-201ENST00000340958 CCDC110Q8TBZ0 833 aa17.82■□□□□ 0.44
CLDN4-201ENST00000340958 UBLCP1Q8WVY7 318 aaPredicted RBP17.82■□□□□ 0.44
CLDN4-201ENST00000340958 DDX50Q9BQ39 737 aaKnown RBP17.82■□□□□ 0.44
CLDN4-201ENST00000340958 KLF16Q9BXK1 252 aaPredicted RBP17.82■□□□□ 0.44
CLDN4-201ENST00000340958 TSPYL1Q9H0U9 437 aa17.82■□□□□ 0.44
CLDN4-201ENST00000340958 TLE6Q9H808 572 aa17.82■□□□□ 0.44
CLDN4-201ENST00000340958 HCFC1R1Q9NWW0 138 aa17.82■□□□□ 0.44
CLDN4-201ENST00000340958 PPARGC1AQ9UBK2 798 aaKnown RBP17.82■□□□□ 0.44
CLDN4-201ENST00000340958 C1RP00736 705 aa17.81■□□□□ 0.44
CLDN4-201ENST00000340958 RHOQP17081 205 aa17.81■□□□□ 0.44
CLDN4-201ENST00000340958 GJA1P17302 382 aa17.81■□□□□ 0.44
CLDN4-201ENST00000340958 CBX1P83916 185 aa17.81■□□□□ 0.44
CLDN4-201ENST00000340958 C4orf22Q6V702 233 aa17.81■□□□□ 0.44
CLDN4-201ENST00000340958 TP53INP2Q8IXH6 220 aa17.81■□□□□ 0.44
CLDN4-201ENST00000340958 PPIL6Q8IXY8 311 aa17.81■□□□□ 0.44
CLDN4-201ENST00000340958 ATPAF2Q8N5M1 289 aa17.81■□□□□ 0.44
CLDN4-201ENST00000340958 P2RY11Q96G91 374 aa17.81■□□□□ 0.44
CLDN4-201ENST00000340958 KLC2Q9H0B6 622 aa17.81■□□□□ 0.44
CLDN4-201ENST00000340958 RAB6BQ9NRW1 208 aa17.81■□□□□ 0.44
CLDN4-201ENST00000340958 CPQQ9Y646 472 aa17.81■□□□□ 0.44
CLDN4-201ENST00000340958 BRWD1Q9NSI6 2320 aa17.8■□□□□ 0.44
CLDN4-201ENST00000340958 HNRNPA1P09651 372 aaKnown RBP eCLIP17.8■□□□□ 0.44
CLDN4-201ENST00000340958 GARSP41250 739 aaKnown RBP17.8■□□□□ 0.44
CLDN4-201ENST00000340958 FAM193AP78312 1265 aa17.8■□□□□ 0.44
CLDN4-201ENST00000340958 GALNT2Q10471 571 aa17.8■□□□□ 0.44
CLDN4-201ENST00000340958 SLMAPQ14BN4 828 aa17.8■□□□□ 0.44
CLDN4-201ENST00000340958 MORF4L2Q15014 288 aa17.8■□□□□ 0.44
CLDN4-201ENST00000340958 PRKD1Q15139 912 aaPredicted RBP17.8■□□□□ 0.44
CLDN4-201ENST00000340958 ARHGAP15Q53QZ3 475 aa17.8■□□□□ 0.44
CLDN4-201ENST00000340958 RABGAP1LQ5R372 815 aa17.8■□□□□ 0.44
CLDN4-201ENST00000340958 NADSYN1Q6IA69 706 aa17.8■□□□□ 0.44
CLDN4-201ENST00000340958 HIBCHQ6NVY1 386 aaPredicted RBP17.8■□□□□ 0.44
CLDN4-201ENST00000340958 RTP4Q96DX8 246 aa17.8■□□□□ 0.44
CLDN4-201ENST00000340958 PKNOX2Q96KN3 472 aa17.8■□□□□ 0.44
CLDN4-201ENST00000340958 RUFY1Q96T51 708 aa17.8■□□□□ 0.44
CLDN4-201ENST00000340958 LMAN2LQ9H0V9 348 aa17.8■□□□□ 0.44
CLDN4-201ENST00000340958 PIDD1Q9HB75 910 aa17.8■□□□□ 0.44
CLDN4-201ENST00000340958 LSM7Q9UK45 103 aaKnown RBP17.8■□□□□ 0.44
CLDN4-201ENST00000340958 NEU3Q9UQ49 428 aa17.8■□□□□ 0.44
CLDN4-201ENST00000340958 E7EVH7 732 aa17.79■□□□□ 0.44
CLDN4-201ENST00000340958 RNF103O00237 685 aa17.79■□□□□ 0.44
CLDN4-201ENST00000340958 MTSS1O43312 755 aa17.79■□□□□ 0.44
CLDN4-201ENST00000340958 VAV1P15498 845 aa17.79■□□□□ 0.44
CLDN4-201ENST00000340958 LMAN1P49257 510 aa17.79■□□□□ 0.44
CLDN4-201ENST00000340958 GPS2Q13227 327 aa17.79■□□□□ 0.44
CLDN4-201ENST00000340958 RFWD3Q6PCD5 774 aa17.79■□□□□ 0.44
CLDN4-201ENST00000340958 CEP128Q6ZU80 1094 aa17.79■□□□□ 0.44
CLDN4-201ENST00000340958 TMC3Q7Z5M5 1100 aa17.79■□□□□ 0.44
CLDN4-201ENST00000340958 IGSF8Q969P0 613 aa17.79■□□□□ 0.44
CLDN4-201ENST00000340958 ZBTB9Q96C00 473 aa17.79■□□□□ 0.44
CLDN4-201ENST00000340958 SLC22A12Q96S37 553 aa17.79■□□□□ 0.44
CLDN4-201ENST00000340958 LRRC3Q9BY71 257 aa17.79■□□□□ 0.44
CLDN4-201ENST00000340958 KLHL8Q9P2G9 620 aaPredicted RBP17.79■□□□□ 0.44
CLDN4-201ENST00000340958 AGO1Q9UL18 857 aaKnown RBP17.79■□□□□ 0.44
CLDN4-201ENST00000340958 SH3BP1Q9Y3L3 701 aa17.79■□□□□ 0.44
CLDN4-201ENST00000340958 HCFC2Q9Y5Z7 792 aa17.79■□□□□ 0.44
CLDN4-201ENST00000340958 C5orf60A6NFR6 353 aa17.79■□□□□ 0.44
CLDN4-201ENST00000340958 KCNK1O00180 336 aa17.79■□□□□ 0.44
CLDN4-201ENST00000340958 GCATO75600 419 aa17.79■□□□□ 0.44
CLDN4-201ENST00000340958 SASH3O75995 380 aa17.79■□□□□ 0.44
CLDN4-201ENST00000340958 NEBLO76041 1014 aa17.79■□□□□ 0.44
CLDN4-201ENST00000340958 CNTN5O94779 1100 aa17.79■□□□□ 0.44
CLDN4-201ENST00000340958 HOXA9P31269 272 aa17.79■□□□□ 0.44
CLDN4-201ENST00000340958 HSPA9P38646 679 aaKnown RBP17.79■□□□□ 0.44
CLDN4-201ENST00000340958 NRIP1P48552 1158 aa17.79■□□□□ 0.44
CLDN4-201ENST00000340958 PMS2P54278 862 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms