RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 HIST1H2AGP0C0S8 130 aaPredicted RBP7.78□□□□□ -1.16
HIPK1-201ENST00000340480 HIST1H2ADP20671 130 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 ACTN3Q08043 901 aaPredicted RBP7.78□□□□□ -1.16
HIPK1-201ENST00000340480 ITGA7Q13683 1181 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 DPYSL2Q16555 572 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 HERC6Q8IVU3 1022 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 HIST1H2AHQ96KK5 128 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 KCNK16Q96T55 309 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 HIST1H2AJQ99878 128 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 H2AFJQ9BTM1 129 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 EIF4E1BA6NMX2 242 aaKnown RBP7.78□□□□□ -1.16
HIPK1-201ENST00000340480 RAMP2O60895 175 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 PGK1P00558 417 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 MTFR1Q15390 333 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 PLD5Q8N7P1 536 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 CINPQ9BW66 212 aaPredicted RBP7.78□□□□□ -1.16
HIPK1-201ENST00000340480 SDCBP2Q9H190 292 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 MINDY3Q9H8M7 445 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 PNPLA8Q9NP80 782 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 NDFIP2Q9NV92 336 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 SCHIP1Q9P0W5 487 aaPredicted RBP7.78□□□□□ -1.16
HIPK1-201ENST00000340480 GTF2IRD1Q9UHL9 959 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 ZNF180Q9UJW8 692 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 ACOT9Q9Y305 439 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 AGPSO00116 658 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 FANCGO15287 622 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 CRTAMO95727 393 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 CES1P23141 567 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 MAP2K2P36507 400 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 HCAR3P49019 387 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 GJA9P57773 515 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 PDK4Q16654 411 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 ARMC3Q5W041 872 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 CCNYL1Q8N7R7 359 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 C2orf15Q8WU43 125 aaKnown RBP7.78□□□□□ -1.16
HIPK1-201ENST00000340480 MRPS31Q92665 395 aaKnown RBP7.78□□□□□ -1.16
HIPK1-201ENST00000340480 ANKRD27Q96NW4 1050 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 CSPG4P5Q96PW8 444 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 TKTL2Q9H0I9 626 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 MFSD1Q9H3U5 465 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 TASP1Q9H6P5 420 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 DDX20Q9UHI6 824 aaKnown RBP7.78□□□□□ -1.16
HIPK1-201ENST00000340480 CFAP99D6REC4 459 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 GCATO75600 419 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 BAG2O95816 211 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 CALCAP01258 141 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 CCND1P24385 295 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 SSTR1P30872 391 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 MROH9Q5TGP6 573 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 PTCD2Q8WV60 388 aaKnown RBP7.78□□□□□ -1.16
HIPK1-201ENST00000340480 NRBF2Q96F24 287 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 NPHS2Q9NP85 383 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 SIX4Q9UIU6 781 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 SLC30A1Q9Y6M5 507 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 SLC12A8A0AV02 714 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 SERPINE1P05121 402 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 SERPINF2P08697 491 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 CRABP2P29373 138 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 CD52P31358 61 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 L1CAMP32004 1257 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 CAPRIN1Q14444 709 aaKnown RBP7.78□□□□□ -1.16
HIPK1-201ENST00000340480 KBTBD12Q3ZCT8 623 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 IL31Q6EBC2 164 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 ARMC2Q8NEN0 867 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 USP33Q8TEY7 942 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 SAR1AQ9NR31 198 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 RBM22Q9NW64 420 aaKnown RBP eCLIP7.78□□□□□ -1.163e-6■■■■■ 29
HIPK1-201ENST00000340480 RPL26L1Q9UNX3 145 aaKnown RBP7.78□□□□□ -1.16
HIPK1-201ENST00000340480 SPACA6W5XKT8 324 aa7.78□□□□□ -1.16
HIPK1-201ENST00000340480 DIAPH2O60879 1101 aa7.77□□□□□ -1.16
HIPK1-201ENST00000340480 FSBPO95073 299 aa7.77□□□□□ -1.16
HIPK1-201ENST00000340480 HK2P52789 917 aa7.77□□□□□ -1.16
HIPK1-201ENST00000340480 ESRRGP62508 458 aa7.77□□□□□ -1.16
HIPK1-201ENST00000340480 PREPLQ4J6C6 727 aaPredicted RBP7.77□□□□□ -1.16
HIPK1-201ENST00000340480 UGT3A1Q6NUS8 523 aa7.77□□□□□ -1.16
HIPK1-201ENST00000340480 PMF1Q6P1K2 205 aa7.77□□□□□ -1.16
HIPK1-201ENST00000340480 ZDHHC24Q6UX98 284 aa7.77□□□□□ -1.16
HIPK1-201ENST00000340480 METTL3Q86U44 580 aaKnown RBP7.77□□□□□ -1.16
HIPK1-201ENST00000340480 SUGP1Q8IWZ8 645 aaKnown RBP7.77□□□□□ -1.16
HIPK1-201ENST00000340480 NSL1Q96IY1 281 aa7.77□□□□□ -1.16
HIPK1-201ENST00000340480 MRPL46Q9H2W6 279 aaKnown RBP7.77□□□□□ -1.16
HIPK1-201ENST00000340480 CASS4Q9NQ75 786 aa7.77□□□□□ -1.16
HIPK1-201ENST00000340480 PADI3Q9ULW8 664 aa7.77□□□□□ -1.16
HIPK1-201ENST00000340480 PAPSS1O43252 624 aaPredicted RBP7.77□□□□□ -1.17
HIPK1-201ENST00000340480 FKTNO75072 461 aa7.77□□□□□ -1.17
HIPK1-201ENST00000340480 ERCC2P18074 760 aa7.77□□□□□ -1.17
HIPK1-201ENST00000340480 BDNFP23560 247 aa7.77□□□□□ -1.17
HIPK1-201ENST00000340480 RGS4P49798 205 aa7.77□□□□□ -1.17
HIPK1-201ENST00000340480 EFEMP1Q12805 493 aa7.77□□□□□ -1.17
HIPK1-201ENST00000340480 PABPC1LQ4VXU2 614 aaKnown RBP7.77□□□□□ -1.17
HIPK1-201ENST00000340480 DCAF12L1Q5VU92 463 aa7.77□□□□□ -1.17
HIPK1-201ENST00000340480 RETSATQ6NUM9 610 aa7.77□□□□□ -1.17
HIPK1-201ENST00000340480 POTEHQ6S545 545 aa7.77□□□□□ -1.17
HIPK1-201ENST00000340480 ILKAPQ9H0C8 392 aaPredicted RBP7.77□□□□□ -1.17
HIPK1-201ENST00000340480 PRDM12Q9H4Q4 367 aa7.77□□□□□ -1.17
HIPK1-201ENST00000340480 GTSE1Q9NYZ3 720 aa7.77□□□□□ -1.17
HIPK1-201ENST00000340480 MAP10Q9P2G4 905 aa7.77□□□□□ -1.17
HIPK1-201ENST00000340480 C2orf81A6NN90 581 aa7.77□□□□□ -1.17
HIPK1-201ENST00000340480 BIRC5O15392 142 aa7.77□□□□□ -1.17
HIPK1-201ENST00000340480 SNX3O60493 162 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms