RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 TYK2P29597 1187 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 NR2C2P49116 596 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 SETDB1Q15047 1291 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 LGSNQ5TDP6 509 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 CDHR3Q6ZTQ4 885 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 DCP1BQ8IZD4 617 aaKnown RBP10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 GSDMBQ8TAX9 411 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 CENPIQ92674 756 aaPredicted RBP10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 MOCOSQ96EN8 888 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 AGAP2Q99490 1192 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 EBNA1BP2Q99848 306 aaKnown RBP10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 IARS2Q9NSE4 1012 aaKnown RBP10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 ZNF358Q9NW07 568 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 RBM22Q9NW64 420 aaKnown RBP eCLIP10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 SLC24A2Q9UI40 661 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 CDH23Q9H251 3354 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 NBNO60934 754 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 SNRPAP09012 282 aaKnown RBP10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 SP100P23497 879 aaPredicted RBP10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 SERPINB6P35237 376 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 CPA2P48052 419 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 WASHC5Q12768 1159 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 DLG2Q15700 870 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 SGF29Q96ES7 293 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 RILPQ96NA2 401 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 CCSER2Q9H7U1 834 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 OSER1Q9NX31 292 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 ADAM28Q9UKQ2 775 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 PCDHB5Q9Y5E4 795 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 TOMM70O94826 608 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 SELPP16109 830 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 OR1D2P34982 312 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 MAGEA9P43362 315 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 SCTRP47872 440 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 SLC11A1P49279 550 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 MNAT1P51948 309 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 CHI3L2Q15782 390 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 ZNF75CPQ92670 426 aaPredicted RBP10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 PTPRN2Q92932 1015 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 SGSM3Q96HU1 749 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 SCYL1Q96KG9 808 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 SUSD3Q96L08 255 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 MAGEB18Q96M61 343 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 ZNF778Q96MU6 729 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 UPF3AQ9H1J1 476 aaKnown RBP10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 HIPK3Q9H422 1215 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 ECT2Q9H8V3 914 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 SP110Q9HB58 689 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 LGALS13Q9UHV8 139 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 DSEQ9UL01 958 aa10.42□□□□□ -0.74
RBFOX1-202ENST00000340209 FKTNO75072 461 aa10.41□□□□□ -0.74
RBFOX1-202ENST00000340209 CNTN5O94779 1100 aa10.41□□□□□ -0.74
RBFOX1-202ENST00000340209 ALDH7A1P49419 539 aaKnown RBP10.41□□□□□ -0.74
RBFOX1-202ENST00000340209 TBX4P57082 545 aa10.41□□□□□ -0.74
RBFOX1-202ENST00000340209 ACTN3Q08043 901 aaPredicted RBP10.41□□□□□ -0.74
RBFOX1-202ENST00000340209 RTP2Q5QGT7 225 aa10.41□□□□□ -0.74
RBFOX1-202ENST00000340209 TTC39BQ5VTQ0 682 aaPredicted RBP10.41□□□□□ -0.74
RBFOX1-202ENST00000340209 ZNF280DQ6N043 979 aa10.41□□□□□ -0.74
RBFOX1-202ENST00000340209 XAB2Q9HCS7 855 aaKnown RBP10.41□□□□□ -0.74
RBFOX1-202ENST00000340209 SMG5Q9UPR3 1016 aaKnown RBP10.41□□□□□ -0.74
RBFOX1-202ENST00000340209 ARVCFO00192 962 aa10.41□□□□□ -0.74
RBFOX1-202ENST00000340209 NR1H3Q13133 447 aa10.41□□□□□ -0.74
RBFOX1-202ENST00000340209 E2F5Q15329 346 aa10.41□□□□□ -0.74
RBFOX1-202ENST00000340209 MAPRE1Q15691 268 aaKnown RBP10.41□□□□□ -0.74
RBFOX1-202ENST00000340209 PACS2Q86VP3 889 aa10.41□□□□□ -0.74
RBFOX1-202ENST00000340209 NUDCD3Q8IVD9 361 aa10.41□□□□□ -0.74
RBFOX1-202ENST00000340209 TNS4Q8IZW8 715 aa10.41□□□□□ -0.74
RBFOX1-202ENST00000340209 RIBC1Q8N443 379 aaPredicted RBP10.41□□□□□ -0.74
RBFOX1-202ENST00000340209 KCTD13Q8WZ19 329 aa10.41□□□□□ -0.74
RBFOX1-202ENST00000340209 EXT2Q93063 718 aa10.41□□□□□ -0.74
RBFOX1-202ENST00000340209 KLHL29Q96CT2 875 aa10.41□□□□□ -0.74
RBFOX1-202ENST00000340209 SLC2A13Q96QE2 648 aa10.41□□□□□ -0.74
RBFOX1-202ENST00000340209 TSSK1BQ9BXA7 367 aa10.41□□□□□ -0.74
RBFOX1-202ENST00000340209 SLC39A10Q9ULF5 831 aa10.41□□□□□ -0.74
RBFOX1-202ENST00000340209 SCN10AQ9Y5Y9 1956 aa10.41□□□□□ -0.74
RBFOX1-202ENST00000340209 TPP1O14773 563 aa10.41□□□□□ -0.74
RBFOX1-202ENST00000340209 OPHN1O60890 802 aa10.41□□□□□ -0.74
RBFOX1-202ENST00000340209 F9P00740 461 aa10.41□□□□□ -0.74
RBFOX1-202ENST00000340209 HOXC8P31273 242 aa10.41□□□□□ -0.74
RBFOX1-202ENST00000340209 PRPSAP1Q14558 356 aa10.41□□□□□ -0.74
RBFOX1-202ENST00000340209 RNF19BQ6ZMZ0 732 aa10.41□□□□□ -0.74
RBFOX1-202ENST00000340209 STRA8Q7Z7C7 330 aa10.41□□□□□ -0.74
RBFOX1-202ENST00000340209 SEPT8Q92599 483 aa10.41□□□□□ -0.74
RBFOX1-202ENST00000340209 MANSC1Q9H8J5 431 aa10.41□□□□□ -0.74
RBFOX1-202ENST00000340209 ACTL7AQ9Y615 435 aa10.41□□□□□ -0.74
RBFOX1-202ENST00000340209 HHLA1C9JL84 531 aa10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 ADAM12O43184 909 aa10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 ZNF623O75123 536 aa10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 GCATO75600 419 aa10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 CBX6O95503 412 aa10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 TROVE2P10155 538 aaKnown RBP eCLIP10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 SKIP12755 728 aa10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 MX2P20592 715 aa10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 YWHAQP27348 245 aa10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 DSC3Q14574 896 aa10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 CRYMQ14894 314 aa10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 FUT10Q6P4F1 479 aa10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.4□□□□□ -0.74
RBFOX1-202ENST00000340209 C16orf59Q7L2K0 433 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms