RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 PAFAH2Q99487 392 aa11.99□□□□□ -0.49
SHANK2-201ENST00000338508 PAIP1Q9H074 479 aaKnown RBP11.99□□□□□ -0.49
SHANK2-201ENST00000338508 TRIM39Q9HCM9 518 aa11.99□□□□□ -0.49
SHANK2-201ENST00000338508 TBC1D13Q9NVG8 400 aa11.99□□□□□ -0.49
SHANK2-201ENST00000338508 ARL15Q9NXU5 204 aa11.99□□□□□ -0.49
SHANK2-201ENST00000338508 KCND2Q9NZV8 630 aa11.99□□□□□ -0.49
SHANK2-201ENST00000338508 ABHD14A-ACY1A0A1B0GW23 586 aa11.99□□□□□ -0.49
SHANK2-201ENST00000338508 ZNF839A8K0R7 811 aa11.99□□□□□ -0.49
SHANK2-201ENST00000338508 VPS4BO75351 444 aa11.99□□□□□ -0.49
SHANK2-201ENST00000338508 CLPTM1O96005 669 aa11.99□□□□□ -0.49
SHANK2-201ENST00000338508 AMHP03971 560 aa11.99□□□□□ -0.49
SHANK2-201ENST00000338508 TMEM253P0C7T8 217 aa11.99□□□□□ -0.49
SHANK2-201ENST00000338508 ITGA9Q13797 1035 aa11.99□□□□□ -0.49
SHANK2-201ENST00000338508 HIC2Q96JB3 615 aa11.99□□□□□ -0.49
SHANK2-201ENST00000338508 PCDH12Q9NPG4 1184 aa11.99□□□□□ -0.49
SHANK2-201ENST00000338508 ARHGAP28Q9P2N2 729 aa11.99□□□□□ -0.49
SHANK2-201ENST00000338508 PCDHB9Q9Y5E1 797 aa11.99□□□□□ -0.49
SHANK2-201ENST00000338508 PREPLQ4J6C6 727 aaPredicted RBP11.99□□□□□ -0.49
SHANK2-201ENST00000338508 TRIM63Q969Q1 353 aa11.99□□□□□ -0.49
SHANK2-201ENST00000338508 POMKQ9H5K3 350 aa11.99□□□□□ -0.49
SHANK2-201ENST00000338508 PCDHB5Q9Y5E4 795 aa11.99□□□□□ -0.49
SHANK2-201ENST00000338508 FAM86B1E9PN63 330 aa11.99□□□□□ -0.49
SHANK2-201ENST00000338508 BDNFP23560 247 aa11.99□□□□□ -0.49
SHANK2-201ENST00000338508 RAD23AP54725 363 aa11.99□□□□□ -0.49
SHANK2-201ENST00000338508 NR1I3Q14994 352 aa11.99□□□□□ -0.49
SHANK2-201ENST00000338508 KRT74Q7RTS7 529 aa11.99□□□□□ -0.49
SHANK2-201ENST00000338508 ADPRHL2Q9NX46 363 aa11.99□□□□□ -0.49
SHANK2-201ENST00000338508 A0A0B4J269 797 aa11.99□□□□□ -0.49
SHANK2-201ENST00000338508 MCIDASD6RGH6 385 aa11.99□□□□□ -0.49
SHANK2-201ENST00000338508 RHOBTB3O94955 611 aa11.99□□□□□ -0.49
SHANK2-201ENST00000338508 IGSF6O95976 241 aa11.99□□□□□ -0.49
SHANK2-201ENST00000338508 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.99□□□□□ -0.49
SHANK2-201ENST00000338508 IZUMO2Q6UXV1 221 aa11.99□□□□□ -0.49
SHANK2-201ENST00000338508 SPOCD1Q6ZMY3 1216 aa11.99□□□□□ -0.49
SHANK2-201ENST00000338508 C3orf20Q8ND61 904 aa11.99□□□□□ -0.49
SHANK2-201ENST00000338508 FBXO30Q8TB52 745 aa11.99□□□□□ -0.49
SHANK2-201ENST00000338508 PIGUQ9H490 435 aa11.99□□□□□ -0.49
SHANK2-201ENST00000338508 CISHQ9NSE2 258 aa11.99□□□□□ -0.49
SHANK2-201ENST00000338508 NDUFAF1Q9Y375 327 aa11.99□□□□□ -0.49
SHANK2-201ENST00000338508 MYO10Q9HD67 2058 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 ARP10275 920 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 UQCRBP14927 111 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 PDK2Q15119 407 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 RAET1GQ6H3X3 334 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 KCNMB4Q86W47 210 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 SLC22A9Q8IVM8 553 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 FAM126BQ8IXS8 530 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 ACER1Q8TDN7 264 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 PRCCQ92733 491 aaPredicted RBP11.98□□□□□ -0.49
SHANK2-201ENST00000338508 RMND5BQ96G75 393 aaPredicted RBP11.98□□□□□ -0.49
SHANK2-201ENST00000338508 ISCUQ9H1K1 167 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 A0A1B0GTH6 734 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 BUD23O43709 281 aaKnown RBP11.98□□□□□ -0.49
SHANK2-201ENST00000338508 IFNGR2P38484 337 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 TRAF3Q13114 568 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 EZH2Q15910 746 aaKnown RBP11.98□□□□□ -0.49
SHANK2-201ENST00000338508 CES5AQ6NT32 575 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 LINC00116Q8NCU8 138 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 GPR156Q8NFN8 814 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 TP53INP1Q96A56 240 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 MPP4Q96JB8 637 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 ZCCHC2Q9C0B9 1178 aaKnown RBP11.98□□□□□ -0.49
SHANK2-201ENST00000338508 CMTM6Q9NX76 183 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 COMMD9Q9P000 198 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 OGDHLQ9ULD0 1010 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 CLEC4AQ9UMR7 237 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 IL1BP01584 269 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 SUPT20HL2P0C7V6 817 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 MUTP22033 750 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 CLK3P49761 638 aaKnown RBP11.98□□□□□ -0.49
SHANK2-201ENST00000338508 C21orf59P57076 290 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 LGALS3BPQ08380 585 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 LAMTOR4Q0VGL1 99 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 ZNHIT3Q15649 155 aaPredicted RBP11.98□□□□□ -0.49
SHANK2-201ENST00000338508 SMU1Q2TAY7 513 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 KLHL12Q53G59 568 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 ZNF484Q5JVG2 852 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 GALNTL5Q7Z4T8 443 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 ADGRG2Q8IZP9 1017 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 FAM9CQ8IZT9 166 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 C2orf73Q8N5S3 287 aaPredicted RBP11.98□□□□□ -0.49
SHANK2-201ENST00000338508 POU5F2Q8N7G0 328 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 RERGQ96A58 199 aaPredicted RBP11.98□□□□□ -0.49
SHANK2-201ENST00000338508 JSRP1Q96MG2 331 aaPredicted RBP11.98□□□□□ -0.49
SHANK2-201ENST00000338508 CORO1BQ9BR76 489 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 CDADC1Q9BWV3 514 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 MROH8Q9H579 483 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 DUSP10Q9Y6W6 482 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 SF3B1O75533 1304 aaKnown RBP eCLIP11.98□□□□□ -0.49
SHANK2-201ENST00000338508 EPN2O95208 641 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 CYP2A6P11509 494 aaPredicted RBP11.98□□□□□ -0.49
SHANK2-201ENST00000338508 CYP11B1P15538 503 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 PSMD4P55036 377 aaKnown RBP11.98□□□□□ -0.49
SHANK2-201ENST00000338508 GRB14Q14449 540 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 ALX1Q15699 326 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 CXorf40BQ96DE9 158 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 CNPY3Q9BT09 278 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 PXMP2Q9NR77 195 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 ANKEF1Q9NU02 776 aa11.98□□□□□ -0.49
SHANK2-201ENST00000338508 BTBD3Q9Y2F9 522 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms