RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 C6orf118Q5T5N4 469 aa12.26□□□□□ -0.45
SPTLC1-202ENST00000337841 RNF43Q68DV7 783 aa12.26□□□□□ -0.45
SPTLC1-202ENST00000337841 FSTL4Q6MZW2 842 aa12.26□□□□□ -0.45
SPTLC1-202ENST00000337841 POLNQ7Z5Q5 900 aa12.26□□□□□ -0.45
SPTLC1-202ENST00000337841 ANKS1BQ7Z6G8 1248 aa12.26□□□□□ -0.45
SPTLC1-202ENST00000337841 SETD3Q86TU7 594 aaPredicted RBP12.26□□□□□ -0.45
SPTLC1-202ENST00000337841 TERB1Q8NA31 727 aa12.26□□□□□ -0.45
SPTLC1-202ENST00000337841 KCNV2Q8TDN2 545 aa12.26□□□□□ -0.45
SPTLC1-202ENST00000337841 C1QTNF1Q9BXJ1 281 aa12.26□□□□□ -0.45
SPTLC1-202ENST00000337841 FOXQ1Q9C009 403 aa12.26□□□□□ -0.45
SPTLC1-202ENST00000337841 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.26□□□□□ -0.45
SPTLC1-202ENST00000337841 ABCB8Q9NUT2 735 aa12.26□□□□□ -0.45
SPTLC1-202ENST00000337841 DDX56Q9NY93 547 aaKnown RBP12.26□□□□□ -0.45
SPTLC1-202ENST00000337841 CLEC4EQ9ULY5 219 aa12.26□□□□□ -0.45
SPTLC1-202ENST00000337841 TBC1D30Q9Y2I9 924 aa12.26□□□□□ -0.45
SPTLC1-202ENST00000337841 TRIM24O15164 1050 aa12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 FGF10O15520 208 aaPredicted RBP12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 ATG13O75143 517 aa12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 EGFP01133 1207 aa12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 ATP5BP06576 529 aaKnown RBP12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 RHOCP08134 193 aa12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 CHRNB1P11230 501 aa12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 PABPC1P11940 636 aaKnown RBP12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 TCF4P15884 667 aa12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 POLR2EP19388 210 aaKnown RBP12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 GJC1P36383 396 aa12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 MAGEA9P43362 315 aa12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 MAPKAPK2P49137 400 aa12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 CDH6P55285 790 aa12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 SEMA3BQ13214 749 aa12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 DPYSL2Q16555 572 aa12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 ALFQ53S48 1182 aa12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 MANEALQ5VSG8 457 aa12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 NAIF1Q69YI7 327 aaPredicted RBP12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 TXNRD3NBQ6F5E7 133 aa12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 ASTLQ6HA08 431 aaPredicted RBP12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 SDE2Q6IQ49 451 aa12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 ZNF783Q6ZMS7 281 aa12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 CYP4V2Q6ZWL3 525 aaPredicted RBP12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 TFAP2DQ7Z6R9 452 aa12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 CIR1Q86X95 450 aaPredicted RBP12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 AHI1Q8N157 1196 aa12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 PHTF2Q8N3S3 785 aa12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 FBXL6Q8N531 539 aa12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 PJA1Q8NG27 643 aa12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 P2RY11Q96G91 374 aa12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 KCTD15Q96SI1 283 aaPredicted RBP12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 KCNF1Q9H3M0 494 aa12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 LZTFL1Q9NQ48 299 aa12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 TMEM248Q9NWD8 314 aa12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 ELOVL2Q9NXB9 296 aa12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 TRIM10Q9UDY6 481 aa12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 GGA2Q9UJY4 613 aa12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 AMFRQ9UKV5 643 aa12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 PLA2G4CQ9UP65 541 aa12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 MTF2Q9Y483 593 aaPredicted RBP12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 HYOU1Q9Y4L1 999 aa12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 SPTBN5Q9NRC6 3674 aaKnown RBP12.25□□□□□ -0.45
SPTLC1-202ENST00000337841 A0A0U1RQJ8 604 aa12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 ILVBLA1L0T0 632 aa12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 WASH4PA8MWX3 477 aa12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 K7EQS6 105 aa12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 PSTPIP1O43586 416 aa12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 GPR37L1O60883 481 aa12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 PALMO75781 387 aa12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 PDGFBP01127 241 aaPredicted RBP12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 AOC1P19801 751 aa12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 HLA-FP30511 346 aa12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 CD70P32970 193 aa12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 ETFBP38117 255 aa12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 RPS9P46781 194 aaKnown RBP12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 PLK1P53350 603 aa12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 MRPS21P82921 87 aaKnown RBP12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 LMAN2Q12907 356 aa12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 CCINQ13939 588 aa12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 EIF4HQ15056 248 aaKnown RBP12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 GEN1Q17RS7 908 aa12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 ATP13A4Q4VNC1 1196 aa12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 FSCBQ5H9T9 825 aa12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 TMEM31Q5JXX7 168 aa12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 RNF219Q5W0B1 726 aaPredicted RBP12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 RFX8Q6ZV50 586 aa12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 PEX26Q7Z412 305 aa12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 KIAA0907Q7Z7F0 614 aaPredicted RBP12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 CPNE8Q86YQ8 564 aa12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 RCOR2Q8IZ40 523 aa12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 ZNF687Q8N1G0 1237 aa12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 RTL3Q8N8U3 475 aaKnown RBP12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 ATRIPQ8WXE1 791 aa12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 CLDN23Q96B33 292 aa12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 FEM1AQ9BSK4 669 aa12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 CALN1Q9BXU9 219 aa12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 MAK16Q9BXY0 300 aaKnown RBP12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 CIPCQ9C0C6 399 aa12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 MUC3BQ9H195 1237 aa12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 PCDH18Q9HCL0 1135 aa12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 CWC15Q9P013 229 aaKnown RBP12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 RCOR3Q9P2K3 495 aaPredicted RBP12.24□□□□□ -0.45
SPTLC1-202ENST00000337841 STARD13Q9Y3M8 1113 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms