RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 EDEM1Q92611 657 aa18.15■□□□□ 0.5
LRCH3-201ENST00000334859 SLC9A7Q96T83 725 aa18.15■□□□□ 0.5
LRCH3-201ENST00000334859 TMEM30AQ9NV96 361 aa18.15■□□□□ 0.5
LRCH3-201ENST00000334859 DCDC2Q9UHG0 476 aa18.15■□□□□ 0.5
LRCH3-201ENST00000334859 DNAJC16Q9Y2G8 782 aa18.15■□□□□ 0.5
LRCH3-201ENST00000334859 LTFP02788 710 aa18.14■□□□□ 0.49
LRCH3-201ENST00000334859 FGF3P11487 239 aaPredicted RBP18.14■□□□□ 0.49
LRCH3-201ENST00000334859 CYP2B6P20813 491 aa18.14■□□□□ 0.49
LRCH3-201ENST00000334859 SLC1A6P48664 564 aa18.14■□□□□ 0.49
LRCH3-201ENST00000334859 CLCNKBP51801 687 aa18.14■□□□□ 0.49
LRCH3-201ENST00000334859 AFF1P51825 1210 aaKnown RBP18.14■□□□□ 0.49
LRCH3-201ENST00000334859 AIF1P55008 147 aa18.14■□□□□ 0.49
LRCH3-201ENST00000334859 PCLAFQ15004 111 aa18.14■□□□□ 0.49
LRCH3-201ENST00000334859 DBN1Q16643 649 aa18.14■□□□□ 0.49
LRCH3-201ENST00000334859 FSCN1Q16658 493 aaKnown RBP18.14■□□□□ 0.49
LRCH3-201ENST00000334859 TRIM68Q6AZZ1 485 aa18.14■□□□□ 0.49
LRCH3-201ENST00000334859 CMC1Q7Z7K0 106 aa18.14■□□□□ 0.49
LRCH3-201ENST00000334859 LPPQ93052 612 aa18.14■□□□□ 0.49
LRCH3-201ENST00000334859 FCRL3Q96P31 734 aaPredicted RBP18.14■□□□□ 0.49
LRCH3-201ENST00000334859 MMADHCQ9H3L0 296 aaPredicted RBP18.14■□□□□ 0.49
LRCH3-201ENST00000334859 LRRC40Q9H9A6 602 aa18.14■□□□□ 0.49
LRCH3-201ENST00000334859 CNGB3Q9NQW8 809 aa18.14■□□□□ 0.49
LRCH3-201ENST00000334859 BFARQ9NZS9 450 aa18.14■□□□□ 0.49
LRCH3-201ENST00000334859 M0QZ92 97 aa18.14■□□□□ 0.49
LRCH3-201ENST00000334859 AP2A1O95782 977 aa18.14■□□□□ 0.49
LRCH3-201ENST00000334859 F7P08709 466 aaPredicted RBP18.14■□□□□ 0.49
LRCH3-201ENST00000334859 CDC25CP30307 473 aa18.14■□□□□ 0.49
LRCH3-201ENST00000334859 GMPRP36959 345 aa18.14■□□□□ 0.49
LRCH3-201ENST00000334859 LHX1P48742 406 aa18.14■□□□□ 0.49
LRCH3-201ENST00000334859 CDK18Q07002 472 aa18.14■□□□□ 0.49
LRCH3-201ENST00000334859 SCAPQ12770 1279 aa18.14■□□□□ 0.49
LRCH3-201ENST00000334859 SEMA3BQ13214 749 aa18.14■□□□□ 0.49
LRCH3-201ENST00000334859 UBAP2LQ14157 1087 aaKnown RBP18.14■□□□□ 0.49
LRCH3-201ENST00000334859 ARL13BQ3SXY8 428 aa18.14■□□□□ 0.49
LRCH3-201ENST00000334859 ACSBG2Q5FVE4 666 aa18.14■□□□□ 0.49
LRCH3-201ENST00000334859 C10orf107Q8IVU9 208 aa18.14■□□□□ 0.49
LRCH3-201ENST00000334859 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.14■□□□□ 0.49
LRCH3-201ENST00000334859 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.14■□□□□ 0.49
LRCH3-201ENST00000334859 FBXO27Q8NI29 283 aa18.14■□□□□ 0.49
LRCH3-201ENST00000334859 PIWIL2Q8TC59 973 aaKnown RBP18.14■□□□□ 0.49
LRCH3-201ENST00000334859 STMN2Q93045 179 aa18.14■□□□□ 0.49
LRCH3-201ENST00000334859 CPNE1Q99829 537 aa18.14■□□□□ 0.49
LRCH3-201ENST00000334859 GORASP1Q9BQQ3 440 aa18.14■□□□□ 0.49
LRCH3-201ENST00000334859 RHOBTB2Q9BYZ6 727 aa18.14■□□□□ 0.49
LRCH3-201ENST00000334859 FBXW11Q9UKB1 542 aa18.14■□□□□ 0.49
LRCH3-201ENST00000334859 SNX10Q9Y5X0 201 aa18.14■□□□□ 0.49
LRCH3-201ENST00000334859 KRT36O76013 467 aa18.13■□□□□ 0.49
LRCH3-201ENST00000334859 CTSHP09668 335 aa18.13■□□□□ 0.49
LRCH3-201ENST00000334859 PPIDQ08752 370 aaKnown RBP18.13■□□□□ 0.49
LRCH3-201ENST00000334859 TEDDM1Q5T9Z0 273 aa18.13■□□□□ 0.49
LRCH3-201ENST00000334859 TMEM86AQ8N2M4 240 aa18.13■□□□□ 0.49
LRCH3-201ENST00000334859 RBM15BQ8NDT2 890 aaKnown RBP18.13■□□□□ 0.49
LRCH3-201ENST00000334859 C3orf58Q8NDZ4 430 aa18.13■□□□□ 0.49
LRCH3-201ENST00000334859 ZMIZ2Q8NF64 920 aa18.13■□□□□ 0.49
LRCH3-201ENST00000334859 WDR60Q8WVS4 1066 aa18.13■□□□□ 0.49
LRCH3-201ENST00000334859 ZNF778Q96MU6 729 aa18.13■□□□□ 0.49
LRCH3-201ENST00000334859 FAM161BQ96MY7 647 aa18.13■□□□□ 0.49
LRCH3-201ENST00000334859 ANKRD27Q96NW4 1050 aa18.13■□□□□ 0.49
LRCH3-201ENST00000334859 COLEC11Q9BWP8 271 aa18.13■□□□□ 0.49
LRCH3-201ENST00000334859 SNX15Q9NRS6 342 aa18.13■□□□□ 0.49
LRCH3-201ENST00000334859 TAGLN3Q9UI15 199 aa18.13■□□□□ 0.49
LRCH3-201ENST00000334859 PRR5-ARHGAP8B1AHC4 643 aa18.12■□□□□ 0.49
LRCH3-201ENST00000334859 SPECC1L-ADORA2AF8WAN1 911 aa18.12■□□□□ 0.49
LRCH3-201ENST00000334859 NCAM2O15394 837 aa18.12■□□□□ 0.49
LRCH3-201ENST00000334859 ZBTB24O43167 697 aaPredicted RBP18.12■□□□□ 0.49
LRCH3-201ENST00000334859 PROCP04070 461 aa18.12■□□□□ 0.49
LRCH3-201ENST00000334859 SERPINE1P05121 402 aa18.12■□□□□ 0.49
LRCH3-201ENST00000334859 THP07101 528 aa18.12■□□□□ 0.49
LRCH3-201ENST00000334859 MXRA7P84157 204 aa18.12■□□□□ 0.49
LRCH3-201ENST00000334859 ARHGAP8P85298 464 aa18.12■□□□□ 0.49
LRCH3-201ENST00000334859 STRA8Q7Z7C7 330 aa18.12■□□□□ 0.49
LRCH3-201ENST00000334859 C2orf69Q8N8R5 385 aa18.12■□□□□ 0.49
LRCH3-201ENST00000334859 MAB21L3Q8N8X9 362 aa18.12■□□□□ 0.49
LRCH3-201ENST00000334859 GSTCDQ8NEC7 633 aa18.12■□□□□ 0.49
LRCH3-201ENST00000334859 PPP4R1Q8TF05 950 aa18.12■□□□□ 0.49
LRCH3-201ENST00000334859 NAF1Q96HR8 494 aaKnown RBP18.12■□□□□ 0.49
LRCH3-201ENST00000334859 EPAS1Q99814 870 aa18.12■□□□□ 0.49
LRCH3-201ENST00000334859 APOL2Q9BQE5 337 aa18.12■□□□□ 0.49
LRCH3-201ENST00000334859 FAM105AQ9NUU6 356 aa18.12■□□□□ 0.49
LRCH3-201ENST00000334859 STOML1Q9UBI4 398 aa18.12■□□□□ 0.49
LRCH3-201ENST00000334859 CDY2AQ9Y6F7 541 aa18.12■□□□□ 0.49
LRCH3-201ENST00000334859 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.12■□□□□ 0.49
LRCH3-201ENST00000334859 SHROOM3Q8TF72 1996 aa18.12■□□□□ 0.49
LRCH3-201ENST00000334859 CASTOR2A6NHX0 329 aa18.12■□□□□ 0.49
LRCH3-201ENST00000334859 ATP9BO43861 1147 aa18.12■□□□□ 0.49
LRCH3-201ENST00000334859 CELF2O95319 508 aaKnown RBP18.12■□□□□ 0.49
LRCH3-201ENST00000334859 SERPINA6P08185 405 aa18.12■□□□□ 0.49
LRCH3-201ENST00000334859 ABCG1P45844 678 aa18.12■□□□□ 0.49
LRCH3-201ENST00000334859 FKBP1BP68106 108 aa18.12■□□□□ 0.49
LRCH3-201ENST00000334859 MRPS6P82932 125 aaKnown RBP18.12■□□□□ 0.49
LRCH3-201ENST00000334859 PURAQ00577 322 aaKnown RBP18.12■□□□□ 0.49
LRCH3-201ENST00000334859 ZBTB17Q13105 803 aa18.12■□□□□ 0.49
LRCH3-201ENST00000334859 GRTP1Q5TC63 336 aa18.12■□□□□ 0.49
LRCH3-201ENST00000334859 TAF2Q6P1X5 1199 aa18.12■□□□□ 0.49
LRCH3-201ENST00000334859 TMPRSS6Q8IU80 811 aa18.12■□□□□ 0.49
LRCH3-201ENST00000334859 DCLK2Q8N568 766 aa18.12■□□□□ 0.49
LRCH3-201ENST00000334859 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.12■□□□□ 0.49
LRCH3-201ENST00000334859 GBA3Q9H227 469 aa18.12■□□□□ 0.49
LRCH3-201ENST00000334859 TMEM216Q9P0N5 145 aa18.12■□□□□ 0.49
LRCH3-201ENST00000334859 ST3GAL5Q9UNP4 418 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms