RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 KIAA1524Q8TCG1 905 aa16.52■□□□□ 0.24
LRRC28-202ENST00000331450 ARHGEF4Q9NR80 690 aa16.52■□□□□ 0.24
LRRC28-202ENST00000331450 TMEM248Q9NWD8 314 aa16.52■□□□□ 0.24
LRRC28-202ENST00000331450 CWC15Q9P013 229 aaKnown RBP16.52■□□□□ 0.24
LRRC28-202ENST00000331450 TBC1D30Q9Y2I9 924 aa16.52■□□□□ 0.24
LRRC28-202ENST00000331450 MUC3AQ02505 3323 aa16.52■□□□□ 0.23
LRRC28-202ENST00000331450 TTC28Q96AY4 2481 aa16.51■□□□□ 0.23
LRRC28-202ENST00000331450 TMEM221A6NGB7 291 aa16.51■□□□□ 0.23
LRRC28-202ENST00000331450 WASH4PA8MWX3 477 aa16.51■□□□□ 0.23
LRRC28-202ENST00000331450 M0R296 226 aa16.51■□□□□ 0.23
LRRC28-202ENST00000331450 EEF2KO00418 725 aaKnown RBP16.51■□□□□ 0.23
LRRC28-202ENST00000331450 FGF10O15520 208 aaPredicted RBP16.51■□□□□ 0.23
LRRC28-202ENST00000331450 PALMO75781 387 aa16.51■□□□□ 0.23
LRRC28-202ENST00000331450 KAT7O95251 611 aa16.51■□□□□ 0.23
LRRC28-202ENST00000331450 GOT1P17174 413 aa16.51■□□□□ 0.23
LRRC28-202ENST00000331450 DRD1P21728 446 aa16.51■□□□□ 0.23
LRRC28-202ENST00000331450 EPHB2P29323 1055 aa16.51■□□□□ 0.23
LRRC28-202ENST00000331450 CD70P32970 193 aa16.51■□□□□ 0.23
LRRC28-202ENST00000331450 MARCKSL1P49006 195 aa16.51■□□□□ 0.23
LRRC28-202ENST00000331450 LMAN2Q12907 356 aa16.51■□□□□ 0.23
LRRC28-202ENST00000331450 FZD5Q13467 585 aa16.51■□□□□ 0.23
LRRC28-202ENST00000331450 CDH18Q13634 790 aa16.51■□□□□ 0.23
LRRC28-202ENST00000331450 DPYSQ14117 519 aa16.51■□□□□ 0.23
LRRC28-202ENST00000331450 DPYSL3Q14195 570 aa16.51■□□□□ 0.23
LRRC28-202ENST00000331450 PPP6R3Q5H9R7 873 aaPredicted RBP16.51■□□□□ 0.23
LRRC28-202ENST00000331450 RFX8Q6ZV50 586 aa16.51■□□□□ 0.23
LRRC28-202ENST00000331450 TFAP2DQ7Z6R9 452 aa16.51■□□□□ 0.23
LRRC28-202ENST00000331450 SFTPA1Q8IWL2 248 aa16.51■□□□□ 0.23
LRRC28-202ENST00000331450 SYCE1Q8N0S2 351 aa16.51■□□□□ 0.23
LRRC28-202ENST00000331450 CARNMT1Q8N4J0 409 aa16.51■□□□□ 0.23
LRRC28-202ENST00000331450 PJA1Q8NG27 643 aa16.51■□□□□ 0.23
LRRC28-202ENST00000331450 EXOC4Q96A65 974 aa16.51■□□□□ 0.23
LRRC28-202ENST00000331450 OSBPL6Q9BZF3 934 aa16.51■□□□□ 0.23
LRRC28-202ENST00000331450 FOXQ1Q9C009 403 aa16.51■□□□□ 0.23
LRRC28-202ENST00000331450 EPHX3Q9H6B9 360 aa16.51■□□□□ 0.23
LRRC28-202ENST00000331450 KLHL11Q9NVR0 708 aa16.51■□□□□ 0.23
LRRC28-202ENST00000331450 RCOR3Q9P2K3 495 aaPredicted RBP16.51■□□□□ 0.23
LRRC28-202ENST00000331450 MRPS17Q9Y2R5 130 aaKnown RBP16.51■□□□□ 0.23
LRRC28-202ENST00000331450 C3orf70A6NLC5 250 aaPredicted RBP16.5■□□□□ 0.23
LRRC28-202ENST00000331450 ZNF487B1APH4 448 aa16.5■□□□□ 0.23
LRRC28-202ENST00000331450 PRRT4C9JH25 899 aa16.5■□□□□ 0.23
LRRC28-202ENST00000331450 H0Y626 953 aa16.5■□□□□ 0.23
LRRC28-202ENST00000331450 H3BRJ5 948 aa16.5■□□□□ 0.23
LRRC28-202ENST00000331450 ZSCAN12O43309 604 aa16.5■□□□□ 0.23
LRRC28-202ENST00000331450 EGFP01133 1207 aa16.5■□□□□ 0.23
LRRC28-202ENST00000331450 APODP05090 189 aa16.5■□□□□ 0.23
LRRC28-202ENST00000331450 CD48P09326 243 aa16.5■□□□□ 0.23
LRRC28-202ENST00000331450 CHRNB1P11230 501 aa16.5■□□□□ 0.23
LRRC28-202ENST00000331450 PABPC1P11940 636 aaKnown RBP16.5■□□□□ 0.23
LRRC28-202ENST00000331450 IL4RP24394 825 aa16.5■□□□□ 0.23
LRRC28-202ENST00000331450 CTNNA1P35221 906 aaKnown RBP16.5■□□□□ 0.23
LRRC28-202ENST00000331450 GRIA2P42262 883 aa16.5■□□□□ 0.23
LRRC28-202ENST00000331450 MAPKAPK2P49137 400 aa16.5■□□□□ 0.23
LRRC28-202ENST00000331450 CDH6P55285 790 aa16.5■□□□□ 0.23
LRRC28-202ENST00000331450 PDK2Q15119 407 aa16.5■□□□□ 0.23
LRRC28-202ENST00000331450 GEN1Q17RS7 908 aa16.5■□□□□ 0.23
LRRC28-202ENST00000331450 PREPLQ4J6C6 727 aaPredicted RBP16.5■□□□□ 0.23
LRRC28-202ENST00000331450 RWDD4Q6NW29 188 aaKnown RBP16.5■□□□□ 0.23
LRRC28-202ENST00000331450 ANKS1BQ7Z6G8 1248 aa16.5■□□□□ 0.23
LRRC28-202ENST00000331450 SETD3Q86TU7 594 aaPredicted RBP16.5■□□□□ 0.23
LRRC28-202ENST00000331450 VSIG1Q86XK7 387 aa16.5■□□□□ 0.23
LRRC28-202ENST00000331450 CCDC105Q8IYK2 499 aa16.5■□□□□ 0.23
LRRC28-202ENST00000331450 RTL3Q8N8U3 475 aaKnown RBP16.5■□□□□ 0.23
LRRC28-202ENST00000331450 KRT35Q92764 455 aa16.5■□□□□ 0.23
LRRC28-202ENST00000331450 FAF2Q96CS3 445 aa16.5■□□□□ 0.23
LRRC28-202ENST00000331450 ALG14Q96F25 216 aa16.5■□□□□ 0.23
LRRC28-202ENST00000331450 CSPG4P5Q96PW8 444 aa16.5■□□□□ 0.23
LRRC28-202ENST00000331450 NELL2Q99435 816 aa16.5■□□□□ 0.23
LRRC28-202ENST00000331450 ZNF670Q9BS34 389 aa16.5■□□□□ 0.23
LRRC28-202ENST00000331450 ABCB8Q9NUT2 735 aa16.5■□□□□ 0.23
LRRC28-202ENST00000331450 NDFIP2Q9NV92 336 aa16.5■□□□□ 0.23
LRRC28-202ENST00000331450 DDX56Q9NY93 547 aaKnown RBP16.5■□□□□ 0.23
LRRC28-202ENST00000331450 GGA2Q9UJY4 613 aa16.5■□□□□ 0.23
LRRC28-202ENST00000331450 INTS6Q9UL03 887 aaKnown RBP16.5■□□□□ 0.23
LRRC28-202ENST00000331450 NDRG2Q9UN36 371 aaKnown RBP16.5■□□□□ 0.23
LRRC28-202ENST00000331450 MTF2Q9Y483 593 aaPredicted RBP16.5■□□□□ 0.23
LRRC28-202ENST00000331450 F5P12259 2224 aa16.49■□□□□ 0.23
LRRC28-202ENST00000331450 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.49■□□□□ 0.23
LRRC28-202ENST00000331450 USP27XA6NNY8 438 aa16.49■□□□□ 0.23
LRRC28-202ENST00000331450 K7EQS6 105 aa16.49■□□□□ 0.23
LRRC28-202ENST00000331450 KDELR1P24390 212 aa16.49■□□□□ 0.23
LRRC28-202ENST00000331450 CTNNA2P26232 953 aa16.49■□□□□ 0.23
LRRC28-202ENST00000331450 ARL4AP40617 200 aa16.49■□□□□ 0.23
LRRC28-202ENST00000331450 PLK1P53350 603 aa16.49■□□□□ 0.23
LRRC28-202ENST00000331450 GRSF1Q12849 480 aaKnown RBP eCLIP16.49■□□□□ 0.23
LRRC28-202ENST00000331450 ZNF177Q13360 481 aaPredicted RBP16.49■□□□□ 0.23
LRRC28-202ENST00000331450 SLC12A1Q13621 1099 aa16.49■□□□□ 0.23
LRRC28-202ENST00000331450 UBXN2BQ14CS0 331 aa16.49■□□□□ 0.23
LRRC28-202ENST00000331450 FUT11Q495W5 492 aa16.49■□□□□ 0.23
LRRC28-202ENST00000331450 TMEM215Q68D42 235 aa16.49■□□□□ 0.23
LRRC28-202ENST00000331450 BMP8AQ7Z5Y6 402 aa16.49■□□□□ 0.23
LRRC28-202ENST00000331450 ADIPOR2Q86V24 386 aa16.49■□□□□ 0.23
LRRC28-202ENST00000331450 KATNAL2Q8IYT4 538 aa16.49■□□□□ 0.23
LRRC28-202ENST00000331450 AHI1Q8N157 1196 aa16.49■□□□□ 0.23
LRRC28-202ENST00000331450 WFIKKN2Q8TEU8 576 aa16.49■□□□□ 0.23
LRRC28-202ENST00000331450 RAPGEF5Q92565 580 aa16.49■□□□□ 0.23
LRRC28-202ENST00000331450 KLC2Q9H0B6 622 aa16.49■□□□□ 0.23
LRRC28-202ENST00000331450 CATSPERBQ9H7T0 1116 aa16.49■□□□□ 0.23
LRRC28-202ENST00000331450 C11orf16Q9NQ32 467 aa16.49■□□□□ 0.23
LRRC28-202ENST00000331450 KIAA1522Q9P206 1035 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms