RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 MRPL42Q9Y6G3 142 aaKnown RBP17.4■□□□□ 0.38
DDX41-201ENST00000330503 E9PAM4 449 aa17.39■□□□□ 0.38
DDX41-201ENST00000330503 ZDHHC11BP0C7U3 371 aa17.39■□□□□ 0.38
DDX41-201ENST00000330503 ATF6P18850 670 aa17.39■□□□□ 0.38
DDX41-201ENST00000330503 KRT15P19012 456 aa17.39■□□□□ 0.38
DDX41-201ENST00000330503 DRD4P21917 467 aa17.39■□□□□ 0.38
DDX41-201ENST00000330503 SARNPP82979 210 aaKnown RBP17.39■□□□□ 0.38
DDX41-201ENST00000330503 SPARCL1Q14515 664 aa17.39■□□□□ 0.38
DDX41-201ENST00000330503 TEX44Q53QW1 395 aa17.39■□□□□ 0.38
DDX41-201ENST00000330503 ZNF683Q8IZ20 524 aa17.39■□□□□ 0.38
DDX41-201ENST00000330503 ANKRD42Q8N9B4 389 aa17.39■□□□□ 0.38
DDX41-201ENST00000330503 SLC44A1Q8WWI5 657 aa17.39■□□□□ 0.38
DDX41-201ENST00000330503 ZNF689Q96CS4 500 aaPredicted RBP17.39■□□□□ 0.38
DDX41-201ENST00000330503 TSGA13Q96PP4 275 aa17.39■□□□□ 0.38
DDX41-201ENST00000330503 TLR8Q9NR97 1041 aaKnown RBP17.39■□□□□ 0.38
DDX41-201ENST00000330503 TMEM51Q9NW97 253 aa17.39■□□□□ 0.38
DDX41-201ENST00000330503 RSPH14Q9UHP6 348 aa17.39■□□□□ 0.38
DDX41-201ENST00000330503 BACE2Q9Y5Z0 518 aa17.39■□□□□ 0.38
DDX41-201ENST00000330503 SLC38A8A6NNN8 435 aa17.39■□□□□ 0.37
DDX41-201ENST00000330503 CXorf49A8MYA2 514 aaPredicted RBP17.39■□□□□ 0.37
DDX41-201ENST00000330503 TRDMT1O14717 391 aaKnown RBP17.39■□□□□ 0.37
DDX41-201ENST00000330503 FGF10O15520 208 aaPredicted RBP17.39■□□□□ 0.37
DDX41-201ENST00000330503 MTSS1O43312 755 aa17.39■□□□□ 0.37
DDX41-201ENST00000330503 SPAG7O75391 227 aa17.39■□□□□ 0.37
DDX41-201ENST00000330503 CPP00450 1065 aa17.39■□□□□ 0.37
DDX41-201ENST00000330503 GSTA2P09210 222 aa17.39■□□□□ 0.37
DDX41-201ENST00000330503 CLTBP09497 229 aa17.39■□□□□ 0.37
DDX41-201ENST00000330503 PRKCHP24723 683 aa17.39■□□□□ 0.37
DDX41-201ENST00000330503 OR1D2P34982 312 aa17.39■□□□□ 0.37
DDX41-201ENST00000330503 RFC2P35250 354 aa17.39■□□□□ 0.37
DDX41-201ENST00000330503 RPL10AP62906 217 aaKnown RBP17.39■□□□□ 0.37
DDX41-201ENST00000330503 PSMD5Q16401 504 aa17.39■□□□□ 0.37
DDX41-201ENST00000330503 QPCTQ16769 361 aa17.39■□□□□ 0.37
DDX41-201ENST00000330503 LRRC26Q2I0M4 334 aa17.39■□□□□ 0.37
DDX41-201ENST00000330503 AFMIDQ63HM1 303 aa17.39■□□□□ 0.37
DDX41-201ENST00000330503 SLC39A8Q9C0K1 460 aa17.39■□□□□ 0.37
DDX41-201ENST00000330503 FAM107BQ9H098 131 aa17.39■□□□□ 0.37
DDX41-201ENST00000330503 SMYD2Q9NRG4 433 aa17.39■□□□□ 0.37
DDX41-201ENST00000330503 MPP6Q9NZW5 540 aa17.39■□□□□ 0.37
DDX41-201ENST00000330503 TRHDEQ9UKU6 1024 aa17.39■□□□□ 0.37
DDX41-201ENST00000330503 MAD1L1Q9Y6D9 718 aa17.39■□□□□ 0.37
DDX41-201ENST00000330503 JCHAINP01591 159 aa17.38■□□□□ 0.37
DDX41-201ENST00000330503 APOEP02649 317 aa17.38■□□□□ 0.37
DDX41-201ENST00000330503 SLC2A3P11169 496 aa17.38■□□□□ 0.37
DDX41-201ENST00000330503 IFNAR2P48551 515 aa17.38■□□□□ 0.37
DDX41-201ENST00000330503 PSEN1P49768 467 aa17.38■□□□□ 0.37
DDX41-201ENST00000330503 TRIP4Q15650 581 aaPredicted RBP17.38■□□□□ 0.37
DDX41-201ENST00000330503 DENND1AQ8TEH3 1009 aa17.38■□□□□ 0.37
DDX41-201ENST00000330503 CHMP6Q96FZ7 201 aa17.38■□□□□ 0.37
DDX41-201ENST00000330503 TEKT5Q96M29 485 aa17.38■□□□□ 0.37
DDX41-201ENST00000330503 AGAP3Q96P47 875 aa17.38■□□□□ 0.37
DDX41-201ENST00000330503 CLSTN3Q9BQT9 956 aa17.38■□□□□ 0.37
DDX41-201ENST00000330503 CATSPERBQ9H7T0 1116 aa17.38■□□□□ 0.37
DDX41-201ENST00000330503 MLXIPLQ9NP71 852 aa17.38■□□□□ 0.37
DDX41-201ENST00000330503 PIH1D1Q9NWS0 290 aaKnown RBP17.38■□□□□ 0.37
DDX41-201ENST00000330503 PCDH10Q9P2E7 1040 aa17.38■□□□□ 0.37
DDX41-201ENST00000330503 PCDHA11Q9Y5I1 949 aa17.38■□□□□ 0.37
DDX41-201ENST00000330503 SHROOM3Q8TF72 1996 aa17.38■□□□□ 0.37
DDX41-201ENST00000330503 SDR42E2A6NKP2 422 aa17.38■□□□□ 0.37
DDX41-201ENST00000330503 DFFAO00273 331 aa17.38■□□□□ 0.37
DDX41-201ENST00000330503 CCNCP24863 283 aa17.38■□□□□ 0.37
DDX41-201ENST00000330503 STX2P32856 288 aa17.38■□□□□ 0.37
DDX41-201ENST00000330503 COG7P83436 770 aa17.38■□□□□ 0.37
DDX41-201ENST00000330503 ZNF33AQ06730 810 aa17.38■□□□□ 0.37
DDX41-201ENST00000330503 OLIG2Q13516 323 aa17.38■□□□□ 0.37
DDX41-201ENST00000330503 C10orf120Q5SQS8 335 aa17.38■□□□□ 0.37
DDX41-201ENST00000330503 KCTD11Q693B1 232 aa17.38■□□□□ 0.37
DDX41-201ENST00000330503 C4orf33Q8N1A6 199 aa17.38■□□□□ 0.37
DDX41-201ENST00000330503 LZTR1Q8N653 840 aa17.38■□□□□ 0.37
DDX41-201ENST00000330503 CNTD1Q8N815 330 aa17.38■□□□□ 0.37
DDX41-201ENST00000330503 ARNTL2Q8WYA1 636 aa17.38■□□□□ 0.37
DDX41-201ENST00000330503 PAWRQ96IZ0 340 aaKnown RBP17.38■□□□□ 0.37
DDX41-201ENST00000330503 MLPHQ9BV36 600 aaPredicted RBP17.38■□□□□ 0.37
DDX41-201ENST00000330503 TTLL2Q9BWV7 592 aa17.38■□□□□ 0.37
DDX41-201ENST00000330503 SENP1Q9P0U3 644 aa17.38■□□□□ 0.37
DDX41-201ENST00000330503 WASH4PA8MWX3 477 aa17.37■□□□□ 0.37
DDX41-201ENST00000330503 PRPF4O43172 522 aaKnown RBP eCLIP17.37■□□□□ 0.376e-6■■■■□ 20.1
DDX41-201ENST00000330503 SUN1O94901 812 aa17.37■□□□□ 0.37
DDX41-201ENST00000330503 SEC24AO95486 1093 aa17.37■□□□□ 0.37
DDX41-201ENST00000330503 MGAT1P26572 445 aa17.37■□□□□ 0.37
DDX41-201ENST00000330503 GJA8P48165 433 aa17.37■□□□□ 0.37
DDX41-201ENST00000330503 WDR4P57081 412 aaKnown RBP17.37■□□□□ 0.37
DDX41-201ENST00000330503 CRADDP78560 199 aa17.37■□□□□ 0.37
DDX41-201ENST00000330503 DEFB103AP81534 67 aa17.37■□□□□ 0.37
DDX41-201ENST00000330503 MS4A13Q5J8X5 152 aa17.37■□□□□ 0.37
DDX41-201ENST00000330503 STEAP4Q687X5 459 aa17.37■□□□□ 0.37
DDX41-201ENST00000330503 FAM117BQ6P1L5 589 aa17.37■□□□□ 0.37
DDX41-201ENST00000330503 TRMT10BQ6PF06 316 aaKnown RBP17.37■□□□□ 0.37
DDX41-201ENST00000330503 RTL3Q8N8U3 475 aaKnown RBP17.37■□□□□ 0.37
DDX41-201ENST00000330503 STAMBPL1Q96FJ0 436 aa17.37■□□□□ 0.37
DDX41-201ENST00000330503 VAT1Q99536 393 aa17.37■□□□□ 0.37
DDX41-201ENST00000330503 GBA3Q9H227 469 aa17.37■□□□□ 0.37
DDX41-201ENST00000330503 NOL6Q9H6R4 1146 aaKnown RBP17.37■□□□□ 0.37
DDX41-201ENST00000330503 CCSER2Q9H7U1 834 aa17.37■□□□□ 0.37
DDX41-201ENST00000330503 RC3H2Q9HBD1 1191 aaKnown RBP17.37■□□□□ 0.37
DDX41-201ENST00000330503 OLA1Q9NTK5 396 aaKnown RBP17.37■□□□□ 0.37
DDX41-201ENST00000330503 MARCH2Q9P0N8 246 aa17.37■□□□□ 0.37
DDX41-201ENST00000330503 ABHD14A-ACY1A0A1B0GW23 586 aa17.36■□□□□ 0.37
DDX41-201ENST00000330503 TRIM43BA6NCK2 446 aa17.36■□□□□ 0.37
DDX41-201ENST00000330503 FAM47DPA6NHR8 397 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 356.9 ms