RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 FESP07332 822 aa15.74■□□□□ 0.11
BRCC3-201ENST00000330045 ARRB2P32121 409 aa15.74■□□□□ 0.11
BRCC3-201ENST00000330045 TMEM62Q0P6H9 643 aa15.74■□□□□ 0.11
BRCC3-201ENST00000330045 IFRD2Q12894 506 aaPredicted RBP15.74■□□□□ 0.11
BRCC3-201ENST00000330045 DCAF6Q58WW2 860 aa15.74■□□□□ 0.11
BRCC3-201ENST00000330045 RALGPS1Q5JS13 557 aa15.74■□□□□ 0.11
BRCC3-201ENST00000330045 GRTP1Q5TC63 336 aa15.74■□□□□ 0.11
BRCC3-201ENST00000330045 PDPK2PQ6A1A2 396 aa15.74■□□□□ 0.11
BRCC3-201ENST00000330045 CATSPER4Q7RTX7 472 aa15.74■□□□□ 0.11
BRCC3-201ENST00000330045 SHKBP1Q8TBC3 707 aa15.74■□□□□ 0.11
BRCC3-201ENST00000330045 CPNE1Q99829 537 aa15.74■□□□□ 0.11
BRCC3-201ENST00000330045 FLRT1Q9NZU1 646 aa15.74■□□□□ 0.11
BRCC3-201ENST00000330045 SYNJ2BP-COX16A0A087WUM0 186 aa15.74■□□□□ 0.11
BRCC3-201ENST00000330045 KPNA7A9QM74 516 aa15.74■□□□□ 0.11
BRCC3-201ENST00000330045 MAP3K13O43283 966 aa15.74■□□□□ 0.11
BRCC3-201ENST00000330045 USP1O94782 785 aa15.74■□□□□ 0.11
BRCC3-201ENST00000330045 CPA3P15088 417 aa15.74■□□□□ 0.11
BRCC3-201ENST00000330045 ALOX15P16050 662 aaPredicted RBP15.74■□□□□ 0.11
BRCC3-201ENST00000330045 SMPD1P17405 629 aa15.74■□□□□ 0.11
BRCC3-201ENST00000330045 HARS2P49590 506 aaKnown RBP15.74■□□□□ 0.11
BRCC3-201ENST00000330045 ITGA9Q13797 1035 aa15.74■□□□□ 0.11
BRCC3-201ENST00000330045 SPANXN3Q5MJ09 141 aa15.74■□□□□ 0.11
BRCC3-201ENST00000330045 ZNF618Q5T7W0 954 aa15.74■□□□□ 0.11
BRCC3-201ENST00000330045 ALKAL1Q6UXT8 129 aa15.74■□□□□ 0.11
BRCC3-201ENST00000330045 PID1Q7Z2X4 250 aa15.74■□□□□ 0.11
BRCC3-201ENST00000330045 EMID1Q96A84 441 aaPredicted RBP15.74■□□□□ 0.11
BRCC3-201ENST00000330045 S100A14Q9HCY8 104 aa15.74■□□□□ 0.11
BRCC3-201ENST00000330045 VTA1Q9NP79 307 aa15.74■□□□□ 0.11
BRCC3-201ENST00000330045 SNX15Q9NRS6 342 aa15.74■□□□□ 0.11
BRCC3-201ENST00000330045 ZNF358Q9NW07 568 aa15.74■□□□□ 0.11
BRCC3-201ENST00000330045 COX16Q9P0S2 106 aa15.74■□□□□ 0.11
BRCC3-201ENST00000330045 IGSF9Q9P2J2 1179 aa15.74■□□□□ 0.11
BRCC3-201ENST00000330045 GJD2Q9UKL4 321 aa15.74■□□□□ 0.11
BRCC3-201ENST00000330045 UBQLN1Q9UMX0 589 aaKnown RBP15.74■□□□□ 0.11
BRCC3-201ENST00000330045 ZNF195O14628 629 aa15.73■□□□□ 0.11
BRCC3-201ENST00000330045 CCNT2O60583 730 aaKnown RBP15.73■□□□□ 0.11
BRCC3-201ENST00000330045 GMPRP36959 345 aa15.73■□□□□ 0.11
BRCC3-201ENST00000330045 PITX1P78337 314 aaPredicted RBP15.73■□□□□ 0.11
BRCC3-201ENST00000330045 FAM110CQ1W6H9 321 aa15.73■□□□□ 0.11
BRCC3-201ENST00000330045 CCDC153Q494R4 210 aa15.73■□□□□ 0.11
BRCC3-201ENST00000330045 VWA5B1Q5TIE3 1220 aa15.73■□□□□ 0.11
BRCC3-201ENST00000330045 PLEKHH3Q7Z736 793 aa15.73■□□□□ 0.11
BRCC3-201ENST00000330045 ADGRG6Q86SQ4 1221 aa15.73■□□□□ 0.11
BRCC3-201ENST00000330045 DCLK2Q8N568 766 aa15.73■□□□□ 0.11
BRCC3-201ENST00000330045 CMTM5Q96DZ9 223 aa15.73■□□□□ 0.11
BRCC3-201ENST00000330045 IFT43Q96FT9 208 aa15.73■□□□□ 0.11
BRCC3-201ENST00000330045 NXF3Q9H4D5 531 aaKnown RBP15.73■□□□□ 0.11
BRCC3-201ENST00000330045 SF3B1O75533 1304 aaKnown RBP eCLIP15.73■□□□□ 0.11
BRCC3-201ENST00000330045 E2F8A0AVK6 867 aa15.73■□□□□ 0.11
BRCC3-201ENST00000330045 PIRO00625 290 aa15.73■□□□□ 0.11
BRCC3-201ENST00000330045 XPO1O14980 1071 aaKnown RBP15.73■□□□□ 0.11
BRCC3-201ENST00000330045 SPTLC1O15269 473 aa15.73■□□□□ 0.11
BRCC3-201ENST00000330045 AHCYL1O43865 530 aa15.73■□□□□ 0.11
BRCC3-201ENST00000330045 RECQL4O94761 1208 aa15.73■□□□□ 0.11
BRCC3-201ENST00000330045 NCF2P19878 526 aaPredicted RBP15.73■□□□□ 0.11
BRCC3-201ENST00000330045 CDK7P50613 346 aa15.73■□□□□ 0.11
BRCC3-201ENST00000330045 ADIGQ0VDE8 80 aa15.73■□□□□ 0.11
BRCC3-201ENST00000330045 CCL14Q16627 93 aa15.73■□□□□ 0.11
BRCC3-201ENST00000330045 PAXIP1Q6ZW49 1069 aaPredicted RBP15.73■□□□□ 0.11
BRCC3-201ENST00000330045 CMC1Q7Z7K0 106 aa15.73■□□□□ 0.11
BRCC3-201ENST00000330045 PIGZQ86VD9 579 aa15.73■□□□□ 0.11
BRCC3-201ENST00000330045 GTF3C2Q8WUA4 911 aaPredicted RBP15.73■□□□□ 0.11
BRCC3-201ENST00000330045 FCRL3Q96P31 734 aaPredicted RBP15.73■□□□□ 0.11
BRCC3-201ENST00000330045 ADAMTS10Q9H324 1103 aa15.73■□□□□ 0.11
BRCC3-201ENST00000330045 UBTFL6P0CB48 400 aaPredicted RBP15.72■□□□□ 0.11
BRCC3-201ENST00000330045 AKAP5P24588 427 aa15.72■□□□□ 0.11
BRCC3-201ENST00000330045 TKTP29401 623 aaKnown RBP15.72■□□□□ 0.11
BRCC3-201ENST00000330045 EPHB1P54762 984 aa15.72■□□□□ 0.11
BRCC3-201ENST00000330045 DEUP1Q05D60 604 aa15.72■□□□□ 0.11
BRCC3-201ENST00000330045 CDC16Q13042 620 aa15.72■□□□□ 0.11
BRCC3-201ENST00000330045 PAFAH1B3Q15102 231 aaKnown RBP15.72■□□□□ 0.11
BRCC3-201ENST00000330045 OTUD1Q5VV17 481 aaPredicted RBP15.72■□□□□ 0.11
BRCC3-201ENST00000330045 NOTUMQ6P988 496 aa15.72■□□□□ 0.11
BRCC3-201ENST00000330045 SAPCD2Q86UD0 394 aa15.72■□□□□ 0.11
BRCC3-201ENST00000330045 PHC3Q8NDX5 983 aa15.72■□□□□ 0.11
BRCC3-201ENST00000330045 APPL2Q8NEU8 664 aa15.72■□□□□ 0.11
BRCC3-201ENST00000330045 SPDYE1Q8NFV5 336 aaPredicted RBP15.72■□□□□ 0.11
BRCC3-201ENST00000330045 OR52K1Q8NGK4 314 aa15.72■□□□□ 0.11
BRCC3-201ENST00000330045 ACTRT2Q8TDY3 377 aa15.72■□□□□ 0.11
BRCC3-201ENST00000330045 PYDC1Q8WXC3 89 aa15.72■□□□□ 0.11
BRCC3-201ENST00000330045 SHCBP1LQ9BZQ2 653 aa15.72■□□□□ 0.11
BRCC3-201ENST00000330045 DNAI2Q9GZS0 605 aa15.72■□□□□ 0.11
BRCC3-201ENST00000330045 LRRC40Q9H9A6 602 aa15.72■□□□□ 0.11
BRCC3-201ENST00000330045 ADAM28Q9UKQ2 775 aa15.72■□□□□ 0.11
BRCC3-201ENST00000330045 RBM47A0AV96 593 aaKnown RBP15.72■□□□□ 0.11
BRCC3-201ENST00000330045 BUD23O43709 281 aaKnown RBP15.72■□□□□ 0.11
BRCC3-201ENST00000330045 STRNO43815 780 aa15.72■□□□□ 0.11
BRCC3-201ENST00000330045 DAB1O75553 588 aa15.72■□□□□ 0.11
BRCC3-201ENST00000330045 CD4P01730 458 aa15.72■□□□□ 0.11
BRCC3-201ENST00000330045 NOS2P35228 1153 aa15.72■□□□□ 0.11
BRCC3-201ENST00000330045 SPRP35270 261 aaPredicted RBP15.72■□□□□ 0.11
BRCC3-201ENST00000330045 OLIG2Q13516 323 aa15.72■□□□□ 0.11
BRCC3-201ENST00000330045 THEMIS2Q5TEJ8 643 aa15.72■□□□□ 0.11
BRCC3-201ENST00000330045 PGM2L1Q6PCE3 622 aa15.72■□□□□ 0.11
BRCC3-201ENST00000330045 TP53INP2Q8IXH6 220 aa15.72■□□□□ 0.11
BRCC3-201ENST00000330045 OR6Y1Q8NGX8 325 aa15.72■□□□□ 0.11
BRCC3-201ENST00000330045 PGLYRP2Q96PD5 576 aa15.72■□□□□ 0.11
BRCC3-201ENST00000330045 RBBP8Q99708 897 aa15.72■□□□□ 0.11
BRCC3-201ENST00000330045 FAM49AQ9H0Q0 323 aaPredicted RBP15.72■□□□□ 0.11
BRCC3-201ENST00000330045 GDAP2Q9NXN4 497 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms