RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 NAGLUP54802 743 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 SLC12A2P55011 1212 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 MRPS22P82650 360 aaKnown RBP13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 PCLAFQ15004 111 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 GEN1Q17RS7 908 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 MBLAC2Q68D91 279 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 PDZD4Q76G19 769 aaPredicted RBP13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 DHDDSQ86SQ9 333 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 TMEM110Q86TL2 294 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 SPATA24Q86W54 205 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 ERO1BQ86YB8 467 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 ANKRD52Q8NB46 1076 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 IPMKQ8NFU5 416 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 APBA2Q99767 749 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 SH3GL3Q99963 347 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 CCDC106Q9BWC9 280 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 CDHR5Q9HBB8 845 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 TCF7L2Q9NQB0 619 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 TK2O00142 265 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 CHRNGP07510 517 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 ERCC2P18074 760 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 MPSTP25325 297 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 PSEN1P49768 467 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 SEMA5AQ13591 1074 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 POU6F1Q14863 301 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 FRMD7Q6ZUT3 714 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 ICA1LQ8NDH6 482 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 PHC3Q8NDX5 983 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 OR6Y1Q8NGX8 325 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 EXT2Q93063 718 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 TNIP3Q96KP6 325 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 LRGUKQ96M69 825 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 OMDQ99983 421 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 VCX3BQ9H321 246 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 LRRC40Q9H9A6 602 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 CHRAC1Q9NRG0 131 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 ADA2Q9NZK5 511 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 CDY2AQ9Y6F7 541 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 CDY1Q9Y6F8 540 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 SOCS7O14512 581 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 MOCS2O96007 188 aaPredicted RBP13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 SETSIPP0DME0 302 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 GRK2P25098 689 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 CNTFP26441 200 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 CCNA1P78396 465 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 BTKQ06187 659 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 R3HDM1Q15032 1099 aaKnown RBP13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 NOTUMQ6P988 496 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 SLC27A1Q6PCB7 646 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 HFE2Q6ZVN8 426 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 SLC26A9Q7LBE3 791 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 PTAR1Q7Z6K3 402 aaPredicted RBP13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 DNAJB3Q8WWF6 145 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 RNF39Q9H2S5 420 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 PLEKHA5Q9HAU0 1116 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 CYP4F12Q9HCS2 524 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 CLEC11AQ9Y240 323 aa13.19□□□□□ -0.3
HMGCS1-201ENST00000325110 CAPN14A8MX76 684 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 FZD9O00144 591 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 GABBR2O75899 941 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 TAF6P49848 677 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 AQP4P55087 323 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 TBCCQ15814 346 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 SLC9B1Q4ZJI4 515 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 LAYNQ6UX15 382 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 C4orf22Q6V702 233 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 KHSRPQ92945 711 aaKnown RBP eCLIP13.18□□□□□ -0.35e-8■■■□□ 15.7
HMGCS1-201ENST00000325110 ZNF778Q96MU6 729 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 ULBP1Q9BZM6 244 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 CDH22Q9UJ99 828 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 UBQLN1Q9UMX0 589 aaKnown RBP13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 PPME1Q9Y570 386 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 COL11A1P12107 1806 aaPredicted RBP13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 CAPN8A6NHC0 703 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 FKBP6O75344 327 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 LTFP02788 710 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 C2P06681 752 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 MATKP42679 507 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 SERPINB8P50452 374 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 RAP1GDS1P52306 607 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 ARHGAP1Q07960 439 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 ITKQ08881 620 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 ZNF460Q14592 562 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 PPM1LQ5SGD2 360 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 C9orf57Q5W0N0 161 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 TMEM198Q66K66 360 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 FSTL4Q6MZW2 842 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 KCNMB4Q86W47 210 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 SPNS2Q8IVW8 549 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 ANKRD13AQ8IZ07 590 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 LENG8Q96PV6 779 aaPredicted RBP13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 CDRT15Q96T59 188 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 CENPKQ9BS16 269 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 S100A14Q9HCY8 104 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 TRIP11Q15643 1979 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 PHIPQ8WWQ0 1821 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 CCDC189A1A4V9 331 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 COX4I1P13073 169 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 NFKB1P19838 968 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms