RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 CCR5P51681 352 aa14.73□□□□□ -0.05
RPP40-201ENST00000319533 RPS24P62847 133 aaKnown RBP14.73□□□□□ -0.05
RPP40-201ENST00000319533 CST6Q15828 149 aa14.73□□□□□ -0.05
RPP40-201ENST00000319533 FSCBQ5H9T9 825 aa14.73□□□□□ -0.05
RPP40-201ENST00000319533 PITRM1Q5JRX3 1037 aa14.73□□□□□ -0.05
RPP40-201ENST00000319533 NCEH1Q6PIU2 408 aa14.73□□□□□ -0.05
RPP40-201ENST00000319533 FOXR2Q6PJQ5 311 aa14.73□□□□□ -0.05
RPP40-201ENST00000319533 PDCD7Q8N8D1 485 aaKnown RBP14.73□□□□□ -0.05
RPP40-201ENST00000319533 OR2T34Q8NGX1 318 aa14.73□□□□□ -0.05
RPP40-201ENST00000319533 SLC6A18Q96N87 628 aa14.73□□□□□ -0.05
RPP40-201ENST00000319533 FAM129BQ96TA1 746 aa14.73□□□□□ -0.05
RPP40-201ENST00000319533 ELF4Q99607 663 aaPredicted RBP14.73□□□□□ -0.05
RPP40-201ENST00000319533 ACE2Q9BYF1 805 aaPredicted RBP14.73□□□□□ -0.05
RPP40-201ENST00000319533 NUCKS1Q9H1E3 243 aaKnown RBP14.73□□□□□ -0.05
RPP40-201ENST00000319533 NEUROG2Q9H2A3 272 aa14.73□□□□□ -0.05
RPP40-201ENST00000319533 STIM2Q9P246 746 aa14.73□□□□□ -0.05
RPP40-201ENST00000319533 MAN1B1Q9UKM7 699 aa14.73□□□□□ -0.05
RPP40-201ENST00000319533 TPX2Q9ULW0 747 aaKnown RBP14.73□□□□□ -0.05
RPP40-201ENST00000319533 CNTN6Q9UQ52 1028 aa14.73□□□□□ -0.05
RPP40-201ENST00000319533 ERVW-1Q9UQF0 538 aa14.73□□□□□ -0.05
RPP40-201ENST00000319533 PCDHGA1Q9Y5H4 931 aa14.73□□□□□ -0.05
RPP40-201ENST00000319533 KNTC1P50748 2209 aa14.73□□□□□ -0.05
RPP40-201ENST00000319533 PLXNA2O75051 1894 aa14.72□□□□□ -0.05
RPP40-201ENST00000319533 A0A087WV48 116 aa14.72□□□□□ -0.05
RPP40-201ENST00000319533 A0A1W2PR77 199 aa14.72□□□□□ -0.05
RPP40-201ENST00000319533 TYW5A2RUC4 315 aaKnown RBP14.72□□□□□ -0.05
RPP40-201ENST00000319533 MID1O15344 667 aa14.72□□□□□ -0.05
RPP40-201ENST00000319533 SART1O43290 800 aaKnown RBP14.72□□□□□ -0.05
RPP40-201ENST00000319533 LUC7L3O95232 432 aaKnown RBP14.72□□□□□ -0.05
RPP40-201ENST00000319533 IGLV3-25P01717 112 aa14.72□□□□□ -0.05
RPP40-201ENST00000319533 WNT1P04628 370 aa14.72□□□□□ -0.05
RPP40-201ENST00000319533 GCNT1Q02742 428 aa14.72□□□□□ -0.05
RPP40-201ENST00000319533 EIF4EBP2Q13542 120 aaPredicted RBP14.72□□□□□ -0.05
RPP40-201ENST00000319533 KCNJ12Q14500 433 aa14.72□□□□□ -0.05
RPP40-201ENST00000319533 SHBQ15464 509 aa14.72□□□□□ -0.05
RPP40-201ENST00000319533 MEA1Q16626 185 aa14.72□□□□□ -0.05
RPP40-201ENST00000319533 DCAF6Q58WW2 860 aa14.72□□□□□ -0.05
RPP40-201ENST00000319533 ADAT2Q7Z6V5 191 aaKnown RBP14.72□□□□□ -0.05
RPP40-201ENST00000319533 TMPRSS12Q86WS5 348 aa14.72□□□□□ -0.05
RPP40-201ENST00000319533 MARCH9Q86YJ5 346 aa14.72□□□□□ -0.05
RPP40-201ENST00000319533 DHX40Q8IX18 779 aaKnown RBP14.72□□□□□ -0.05
RPP40-201ENST00000319533 SCUBE3Q8IX30 993 aa14.72□□□□□ -0.05
RPP40-201ENST00000319533 PPM1KQ8N3J5 372 aa14.72□□□□□ -0.05
RPP40-201ENST00000319533 STK32AQ8WU08 396 aa14.72□□□□□ -0.05
RPP40-201ENST00000319533 FAM131CQ96AQ9 280 aa14.72□□□□□ -0.05
RPP40-201ENST00000319533 SKA1Q96BD8 255 aa14.72□□□□□ -0.05
RPP40-201ENST00000319533 DHTKD1Q96HY7 919 aaPredicted RBP14.72□□□□□ -0.05
RPP40-201ENST00000319533 NAALADL1Q9UQQ1 740 aa14.72□□□□□ -0.05
RPP40-201ENST00000319533 EDDM13A0A1B0GTR0 161 aa14.71□□□□□ -0.05
RPP40-201ENST00000319533 A0A1W2PP55 124 aa14.71□□□□□ -0.05
RPP40-201ENST00000319533 LRRC72A6NJI9 287 aa14.71□□□□□ -0.05
RPP40-201ENST00000319533 GOLGA8CPA6NN73 597 aa14.71□□□□□ -0.05
RPP40-201ENST00000319533 TTC34A8MYJ7 566 aa14.71□□□□□ -0.05
RPP40-201ENST00000319533 GOT1P17174 413 aa14.71□□□□□ -0.05
RPP40-201ENST00000319533 SLC8A1P32418 973 aa14.71□□□□□ -0.05
RPP40-201ENST00000319533 CTSOP43234 321 aaPredicted RBP14.71□□□□□ -0.05
RPP40-201ENST00000319533 C21orf59P57076 290 aa14.71□□□□□ -0.05
RPP40-201ENST00000319533 ECT2LQ008S8 904 aa14.71□□□□□ -0.05
RPP40-201ENST00000319533 CYP4F3Q08477 520 aa14.71□□□□□ -0.05
RPP40-201ENST00000319533 CDH18Q13634 790 aa14.71□□□□□ -0.05
RPP40-201ENST00000319533 ISM2Q6H9L7 571 aa14.71□□□□□ -0.05
RPP40-201ENST00000319533 MMS22LQ6ZRQ5 1243 aa14.71□□□□□ -0.05
RPP40-201ENST00000319533 TAC4Q86UU9 113 aa14.71□□□□□ -0.05
RPP40-201ENST00000319533 MMAAQ8IVH4 418 aaKnown RBP14.71□□□□□ -0.05
RPP40-201ENST00000319533 CFAP52Q8N1V2 620 aa14.71□□□□□ -0.05
RPP40-201ENST00000319533 CARNMT1Q8N4J0 409 aa14.71□□□□□ -0.05
RPP40-201ENST00000319533 AADATQ8N5Z0 425 aa14.71□□□□□ -0.05
RPP40-201ENST00000319533 SAP25Q8TEE9 199 aa14.71□□□□□ -0.05
RPP40-201ENST00000319533 GANCQ8TET4 914 aa14.71□□□□□ -0.05
RPP40-201ENST00000319533 HNRNPLLQ8WVV9 542 aaKnown RBP14.71□□□□□ -0.05
RPP40-201ENST00000319533 PTPRN2Q92932 1015 aa14.71□□□□□ -0.05
RPP40-201ENST00000319533 TRIM62Q9BVG3 475 aa14.71□□□□□ -0.05
RPP40-201ENST00000319533 SLC4A5Q9BY07 1137 aa14.71□□□□□ -0.05
RPP40-201ENST00000319533 MIS12Q9H081 205 aa14.71□□□□□ -0.05
RPP40-201ENST00000319533 FTSJ1Q9UET6 329 aa14.71□□□□□ -0.05
RPP40-201ENST00000319533 SLCO3A1Q9UIG8 710 aa14.71□□□□□ -0.05
RPP40-201ENST00000319533 YKT6O15498 198 aa14.7□□□□□ -0.06
RPP40-201ENST00000319533 MOCS3O95396 460 aa14.7□□□□□ -0.06
RPP40-201ENST00000319533 CALCAP01258 141 aa14.7□□□□□ -0.06
RPP40-201ENST00000319533 C1SP09871 688 aa14.7□□□□□ -0.06
RPP40-201ENST00000319533 CDK4P11802 303 aa14.7□□□□□ -0.06
RPP40-201ENST00000319533 C5AR1P21730 350 aa14.7□□□□□ -0.06
RPP40-201ENST00000319533 CD38P28907 300 aa14.7□□□□□ -0.06
RPP40-201ENST00000319533 ACADSBP45954 432 aa14.7□□□□□ -0.06
RPP40-201ENST00000319533 PLK1P53350 603 aa14.7□□□□□ -0.06
RPP40-201ENST00000319533 IL9RQ01113 521 aa14.7□□□□□ -0.06
RPP40-201ENST00000319533 CETN1Q12798 172 aa14.7□□□□□ -0.06
RPP40-201ENST00000319533 SLC12A1Q13621 1099 aa14.7□□□□□ -0.06
RPP40-201ENST00000319533 SYPL2Q5VXT5 272 aa14.7□□□□□ -0.06
RPP40-201ENST00000319533 TTI2Q6NXR4 508 aa14.7□□□□□ -0.06
RPP40-201ENST00000319533 DHRS13Q6UX07 377 aa14.7□□□□□ -0.06
RPP40-201ENST00000319533 SND1Q7KZF4 910 aaKnown RBP eCLIP14.7□□□□□ -0.06
RPP40-201ENST00000319533 RRAGAQ7L523 313 aa14.7□□□□□ -0.06
RPP40-201ENST00000319533 TMEM110Q86TL2 294 aa14.7□□□□□ -0.06
RPP40-201ENST00000319533 ARHGEF19Q8IW93 802 aa14.7□□□□□ -0.06
RPP40-201ENST00000319533 CCDC117Q8IWD4 279 aaPredicted RBP14.7□□□□□ -0.06
RPP40-201ENST00000319533 APCDD1Q8J025 514 aa14.7□□□□□ -0.06
RPP40-201ENST00000319533 EHBP1Q8NDI1 1231 aa14.7□□□□□ -0.06
RPP40-201ENST00000319533 KREMEN1Q96MU8 473 aa14.7□□□□□ -0.06
RPP40-201ENST00000319533 OMDQ99983 421 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms