RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 SEMA4FO95754 770 aa18.33■□□□□ 0.52
TPM1-203ENST00000317516 F9P00740 461 aa18.33■□□□□ 0.52
TPM1-203ENST00000317516 PNMA6AP0CW24 399 aaPredicted RBP18.33■□□□□ 0.52
TPM1-203ENST00000317516 ACSL1P33121 698 aa18.33■□□□□ 0.52
TPM1-203ENST00000317516 MATKP42679 507 aa18.33■□□□□ 0.52
TPM1-203ENST00000317516 PTPN20Q4JDL3 420 aa18.33■□□□□ 0.52
TPM1-203ENST00000317516 DPY19L2P1Q6NXN4 242 aa18.33■□□□□ 0.52
TPM1-203ENST00000317516 IL27RAQ6UWB1 636 aa18.33■□□□□ 0.52
TPM1-203ENST00000317516 USP30Q70CQ3 517 aa18.33■□□□□ 0.52
TPM1-203ENST00000317516 SND1Q7KZF4 910 aaKnown RBP eCLIP18.33■□□□□ 0.52
TPM1-203ENST00000317516 PIP4P1Q86T03 277 aa18.33■□□□□ 0.52
TPM1-203ENST00000317516 ERICH1Q86X53 443 aa18.33■□□□□ 0.52
TPM1-203ENST00000317516 CCAR2Q8N163 923 aaKnown RBP18.33■□□□□ 0.52
TPM1-203ENST00000317516 ZCCHC9Q8N567 271 aaKnown RBP18.33■□□□□ 0.52
TPM1-203ENST00000317516 SNX19Q92543 992 aa18.33■□□□□ 0.52
TPM1-203ENST00000317516 C18orf8Q96DM3 657 aa18.33■□□□□ 0.52
TPM1-203ENST00000317516 MYO19Q96H55 970 aa18.33■□□□□ 0.52
TPM1-203ENST00000317516 MRGPRX3Q96LB0 322 aa18.33■□□□□ 0.52
TPM1-203ENST00000317516 RPRD1AQ96P16 312 aaPredicted RBP18.33■□□□□ 0.52
TPM1-203ENST00000317516 PRMT1Q99873 361 aaKnown RBP18.33■□□□□ 0.52
TPM1-203ENST00000317516 PLCB1Q9NQ66 1216 aa18.33■□□□□ 0.52
TPM1-203ENST00000317516 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.33■□□□□ 0.52
TPM1-203ENST00000317516 EIF2B4Q9UI10 523 aaKnown RBP18.33■□□□□ 0.52
TPM1-203ENST00000317516 FHOD1Q9Y613 1164 aa18.33■□□□□ 0.52
TPM1-203ENST00000317516 ACACBO00763 2458 aa18.32■□□□□ 0.52
TPM1-203ENST00000317516 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.32■□□□□ 0.52
TPM1-203ENST00000317516 EDDM13A0A1B0GTR0 161 aa18.32■□□□□ 0.52
TPM1-203ENST00000317516 SIN3BO75182 1162 aa18.32■□□□□ 0.52
TPM1-203ENST00000317516 CDH5P33151 784 aaPredicted RBP18.32■□□□□ 0.52
TPM1-203ENST00000317516 SCNN1AP37088 669 aa18.32■□□□□ 0.52
TPM1-203ENST00000317516 RNASE9P60153 205 aaKnown RBP18.32■□□□□ 0.52
TPM1-203ENST00000317516 ZNF177Q13360 481 aaPredicted RBP18.32■□□□□ 0.52
TPM1-203ENST00000317516 AUHQ13825 339 aaKnown RBP18.32■□□□□ 0.52
TPM1-203ENST00000317516 FKBP15Q5T1M5 1219 aa18.32■□□□□ 0.52
TPM1-203ENST00000317516 FBXL22Q6P050 247 aa18.32■□□□□ 0.52
TPM1-203ENST00000317516 DHX40Q8IX18 779 aaKnown RBP18.32■□□□□ 0.52
TPM1-203ENST00000317516 APCDD1Q8J025 514 aa18.32■□□□□ 0.52
TPM1-203ENST00000317516 NAA15Q9BXJ9 866 aaKnown RBP18.32■□□□□ 0.52
TPM1-203ENST00000317516 WDCPQ9H6R7 721 aa18.32■□□□□ 0.52
TPM1-203ENST00000317516 LSM8O95777 96 aaKnown RBP18.31■□□□□ 0.52
TPM1-203ENST00000317516 PDGFRAP16234 1089 aa18.31■□□□□ 0.52
TPM1-203ENST00000317516 GABRB2P47870 512 aa18.31■□□□□ 0.52
TPM1-203ENST00000317516 AFF3P51826 1226 aaKnown RBP18.31■□□□□ 0.52
TPM1-203ENST00000317516 PLK1P53350 603 aa18.31■□□□□ 0.52
TPM1-203ENST00000317516 GRIK2Q13002 908 aa18.31■□□□□ 0.52
TPM1-203ENST00000317516 TEAD4Q15561 434 aa18.31■□□□□ 0.52
TPM1-203ENST00000317516 BRMS1LQ5PSV4 323 aa18.31■□□□□ 0.52
TPM1-203ENST00000317516 C9orf64Q5T6V5 341 aa18.31■□□□□ 0.52
TPM1-203ENST00000317516 ACBD5Q5T8D3 534 aaPredicted RBP18.31■□□□□ 0.52
TPM1-203ENST00000317516 SASS6Q6UVJ0 657 aa18.31■□□□□ 0.52
TPM1-203ENST00000317516 ANKRD20A12PQ8NF67 263 aa18.31■□□□□ 0.52
TPM1-203ENST00000317516 PABPC3Q9H361 631 aaKnown RBP18.31■□□□□ 0.52
TPM1-203ENST00000317516 MTG2Q9H4K7 406 aa18.31■□□□□ 0.52
TPM1-203ENST00000317516 C6orf106Q9H6K1 298 aaPredicted RBP18.31■□□□□ 0.52
TPM1-203ENST00000317516 FBXL12Q9NXK8 326 aa18.31■□□□□ 0.52
TPM1-203ENST00000317516 TAB2Q9NYJ8 693 aa18.31■□□□□ 0.52
TPM1-203ENST00000317516 SLCO3A1Q9UIG8 710 aa18.31■□□□□ 0.52
TPM1-203ENST00000317516 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.31■□□□□ 0.52
TPM1-203ENST00000317516 ITIH6Q6UXX5 1313 aa18.3■□□□□ 0.52
TPM1-203ENST00000317516 TTC34A8MYJ7 566 aa18.3■□□□□ 0.52
TPM1-203ENST00000317516 CLDN11O75508 207 aa18.3■□□□□ 0.52
TPM1-203ENST00000317516 CER1O95813 267 aa18.3■□□□□ 0.52
TPM1-203ENST00000317516 CD59P13987 128 aa18.3■□□□□ 0.52
TPM1-203ENST00000317516 CTSOP43234 321 aaPredicted RBP18.3■□□□□ 0.52
TPM1-203ENST00000317516 FOXC1Q12948 553 aa18.3■□□□□ 0.52
TPM1-203ENST00000317516 CST6Q15828 149 aa18.3■□□□□ 0.52
TPM1-203ENST00000317516 TAF3Q5VWG9 929 aa18.3■□□□□ 0.52
TPM1-203ENST00000317516 ZNF677Q86XU0 584 aa18.3■□□□□ 0.52
TPM1-203ENST00000317516 MMAAQ8IVH4 418 aaKnown RBP18.3■□□□□ 0.52
TPM1-203ENST00000317516 OR2I1PQ8NGU4 316 aa18.3■□□□□ 0.52
TPM1-203ENST00000317516 RPL10LQ96L21 214 aaKnown RBP18.3■□□□□ 0.52
TPM1-203ENST00000317516 NPY6RQ99463 290 aa18.3■□□□□ 0.52
TPM1-203ENST00000317516 OMDQ99983 421 aa18.3■□□□□ 0.52
TPM1-203ENST00000317516 VPS16Q9H269 839 aa18.3■□□□□ 0.52
TPM1-203ENST00000317516 OSGEPQ9NPF4 335 aa18.3■□□□□ 0.52
TPM1-203ENST00000317516 VANGL2Q9ULK5 521 aa18.3■□□□□ 0.52
TPM1-203ENST00000317516 DAAM1Q9Y4D1 1078 aa18.3■□□□□ 0.52
TPM1-203ENST00000317516 PCDHB9Q9Y5E1 797 aa18.3■□□□□ 0.52
TPM1-203ENST00000317516 HS3ST4Q9Y661 456 aa18.3■□□□□ 0.52
TPM1-203ENST00000317516 F8VZ95 297 aa18.29■□□□□ 0.52
TPM1-203ENST00000317516 PAGE1O75459 146 aa18.29■□□□□ 0.52
TPM1-203ENST00000317516 FSBPO95073 299 aa18.29■□□□□ 0.52
TPM1-203ENST00000317516 CD27P26842 260 aa18.29■□□□□ 0.52
TPM1-203ENST00000317516 SLC8A1P32418 973 aa18.29■□□□□ 0.52
TPM1-203ENST00000317516 CXCR3P49682 368 aa18.29■□□□□ 0.52
TPM1-203ENST00000317516 SIM1P81133 766 aaPredicted RBP18.29■□□□□ 0.52
TPM1-203ENST00000317516 DEUP1Q05D60 604 aa18.29■□□□□ 0.52
TPM1-203ENST00000317516 SLC25A52Q3SY17 297 aa18.29■□□□□ 0.52
TPM1-203ENST00000317516 FAM102AQ5T9C2 384 aaPredicted RBP18.29■□□□□ 0.52
TPM1-203ENST00000317516 LRRC31Q6UY01 552 aa18.29■□□□□ 0.52
TPM1-203ENST00000317516 CIR1Q86X95 450 aaPredicted RBP18.29■□□□□ 0.52
TPM1-203ENST00000317516 C1orf216Q8TAB5 229 aa18.29■□□□□ 0.52
TPM1-203ENST00000317516 IGSF8Q969P0 613 aa18.29■□□□□ 0.52
TPM1-203ENST00000317516 BIRC7Q96CA5 298 aa18.29■□□□□ 0.52
TPM1-203ENST00000317516 PGAP3Q96FM1 320 aaPredicted RBP18.29■□□□□ 0.52
TPM1-203ENST00000317516 TKTL2Q9H0I9 626 aa18.29■□□□□ 0.52
TPM1-203ENST00000317516 SIK2Q9H0K1 926 aa18.29■□□□□ 0.52
TPM1-203ENST00000317516 GAREM1Q9H706 876 aa18.29■□□□□ 0.52
TPM1-203ENST00000317516 ANO10Q9NW15 660 aa18.29■□□□□ 0.52
TPM1-203ENST00000317516 LAMA1P25391 3075 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms