RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 MORF4L2Q15014 288 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 PDK2Q15119 407 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 DPYSL2Q16555 572 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 TAZQ16635 292 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 RNF43Q68DV7 783 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 HEATR6Q6AI08 1181 aaKnown RBP7.82□□□□□ -1.16
TRIM55-202ENST00000315962 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.82□□□□□ -1.16
TRIM55-202ENST00000315962 ARHGAP36Q6ZRI8 547 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 ZNF598Q86UK7 904 aaKnown RBP7.82□□□□□ -1.16
TRIM55-202ENST00000315962 TAC4Q86UU9 113 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 PDIK1LQ8N165 341 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 GIPC2Q8TF65 315 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 ZNF75CPQ92670 426 aaPredicted RBP7.82□□□□□ -1.16
TRIM55-202ENST00000315962 CENPIQ92674 756 aaPredicted RBP7.82□□□□□ -1.16
TRIM55-202ENST00000315962 HHIPL1Q96JK4 782 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 RAB3IPQ96QF0 476 aaPredicted RBP7.82□□□□□ -1.16
TRIM55-202ENST00000315962 NPY6RQ99463 290 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 CCDC77Q9BR77 488 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.82□□□□□ -1.16
TRIM55-202ENST00000315962 CRISPLD1Q9H336 500 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 NMUR1Q9HB89 426 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 NDFIP2Q9NV92 336 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 CDH9Q9ULB4 789 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 FARP1Q9Y4F1 1045 aaPredicted RBP7.82□□□□□ -1.16
TRIM55-202ENST00000315962 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.82□□□□□ -1.16
TRIM55-202ENST00000315962 USP34Q70CQ2 3546 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 PRRC2BQ5JSZ5 2229 aaKnown RBP7.82□□□□□ -1.16
TRIM55-202ENST00000315962 TTC24A2A3L6 582 aaPredicted RBP7.82□□□□□ -1.16
TRIM55-202ENST00000315962 TBKBP1A7MCY6 615 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 CPB1P15086 417 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 ERCC2P18074 760 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 RPL9P32969 192 aaKnown RBP7.82□□□□□ -1.16
TRIM55-202ENST00000315962 GMPRP36959 345 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 PTPN9P43378 593 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 SARNPP82979 210 aaKnown RBP7.82□□□□□ -1.16
TRIM55-202ENST00000315962 NR1H3Q13133 447 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 MGAT5BQ3V5L5 792 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 ACSBG2Q5FVE4 666 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 DRICH1Q6PGQ1 229 aaPredicted RBP7.82□□□□□ -1.16
TRIM55-202ENST00000315962 ALYREFQ86V81 257 aaKnown RBP7.82□□□□□ -1.16
TRIM55-202ENST00000315962 ZDHHC17Q8IUH5 632 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 DNAJC9Q8WXX5 260 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 P2RY11Q96G91 374 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 CADM1Q9BY67 442 aaKnown RBP7.82□□□□□ -1.16
TRIM55-202ENST00000315962 LRMDAQ9H2I8 198 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 WDR6Q9NNW5 1121 aaKnown RBP7.82□□□□□ -1.16
TRIM55-202ENST00000315962 RGS18Q9NS28 235 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 SPATS2LQ9NUQ6 558 aaKnown RBP7.82□□□□□ -1.16
TRIM55-202ENST00000315962 STAP1Q9ULZ2 295 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 PCDHB7Q9Y5E2 793 aa7.82□□□□□ -1.16
TRIM55-202ENST00000315962 CHD9Q3L8U1 2897 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.81□□□□□ -1.16
TRIM55-202ENST00000315962 A0A1W2PQH9 124 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 MEI4A8MW99 385 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 GOLGA8TH3BQL2 631 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 DFFAO00273 331 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 TPH1P17752 444 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 BGNP21810 368 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 DNAJB2P25686 324 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 CST5P28325 142 aaPredicted RBP7.81□□□□□ -1.16
TRIM55-202ENST00000315962 CA8P35219 290 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 NEK3P51956 506 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 PGGT1BP53609 377 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 ARL4CP56559 192 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 TSPY1Q01534 308 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 KBTBD12Q3ZCT8 623 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 CTXN3Q4LDR2 81 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 EFHC2Q5JST6 749 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 VARS2Q5ST30 1063 aaKnown RBP7.81□□□□□ -1.16
TRIM55-202ENST00000315962 SLC9A4Q6AI14 798 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 TRMT10BQ6PF06 316 aaKnown RBP7.81□□□□□ -1.16
TRIM55-202ENST00000315962 RINLQ6ZS11 566 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 BHLHA9Q7RTU4 235 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 PID1Q7Z2X4 250 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 TFAP2DQ7Z6R9 452 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 CCNJLQ8IV13 435 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 THEM5Q8N1Q8 247 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 TMEM86AQ8N2M4 240 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 EFCAB3Q8N7B9 438 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 PNPLA1Q8N8W4 532 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 RNF217Q8TC41 542 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 CASP10Q92851 521 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 ATXN7L3BQ96GX2 97 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 FAM111AQ96PZ2 611 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 ACBD6Q9BR61 282 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 LRFN2Q9ULH4 789 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 SPTBN5Q9NRC6 3674 aaKnown RBP7.81□□□□□ -1.16
TRIM55-202ENST00000315962 MYO15AQ9UKN7 3530 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 FAM237BA0A1B0GVD1 139 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 TTC36A6NLP5 189 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 CXorf49A8MYA2 514 aaPredicted RBP7.81□□□□□ -1.16
TRIM55-202ENST00000315962 RNF103O00237 685 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 DPYSL4O14531 572 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 ADAM12O43184 909 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 LRIG2O94898 1065 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 SPATA31D3P0C874 917 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 ETS2P15036 469 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 STIP1P31948 543 aaKnown RBP7.81□□□□□ -1.16
TRIM55-202ENST00000315962 PTPN7P35236 360 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 ABCG1P45844 678 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms