RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 FAM167BQ9BTA0 163 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 UNKQ9C0B0 810 aaKnown RBP11.83□□□□□ -0.52
PTPN2-201ENST00000309660 ARHGAP42A6NI28 874 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 ZNF487B1APH4 448 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 NEBLO76041 1014 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 LRIG2O94898 1065 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 AKR1A1P14550 325 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 ZBTB17Q13105 803 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 XKR4Q5GH76 650 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 ARCQ7LC44 396 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 SCN4BQ8IWT1 228 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 SKA1Q96BD8 255 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 FAM161BQ96MY7 647 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 EPAS1Q99814 870 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 WWP1Q9H0M0 922 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 WDR6Q9NNW5 1121 aaKnown RBP11.83□□□□□ -0.52
PTPN2-201ENST00000309660 SAR1AQ9NR31 198 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 CHRAC1Q9NRG0 131 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 C20orf96Q9NUD7 363 aaPredicted RBP11.83□□□□□ -0.52
PTPN2-201ENST00000309660 TMEM216Q9P0N5 145 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 RCOR3Q9P2K3 495 aaPredicted RBP11.83□□□□□ -0.52
PTPN2-201ENST00000309660 MCM8Q9UJA3 840 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 TRPV2Q9Y5S1 764 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 GABRDO14764 452 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 DCLK1O15075 740 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 MSI1O43347 362 aaKnown RBP11.83□□□□□ -0.52
PTPN2-201ENST00000309660 GSTA2P09210 222 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 GLUD2P49448 558 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 ITGA9Q13797 1035 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 DPYSQ14117 519 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 CST9Q5W186 159 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 AGMOQ6ZNB7 445 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 PAXIP1Q6ZW49 1069 aaPredicted RBP11.83□□□□□ -0.52
PTPN2-201ENST00000309660 RAPH1Q70E73 1250 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 OTOP3Q7RTS5 596 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 C10orf107Q8IVU9 208 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 FBXO27Q8NI29 283 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 MOCOSQ96EN8 888 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 ATXN3LQ9H3M9 355 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 TAS2R1Q9NYW7 299 aa11.83□□□□□ -0.52
PTPN2-201ENST00000309660 MEI4A8MW99 385 aa11.82□□□□□ -0.52
PTPN2-201ENST00000309660 PEX11AO75192 247 aa11.82□□□□□ -0.52
PTPN2-201ENST00000309660 TOMM70O94826 608 aa11.82□□□□□ -0.52
PTPN2-201ENST00000309660 OR4Q2P0C623 313 aa11.82□□□□□ -0.52
PTPN2-201ENST00000309660 ELF1P32519 619 aa11.82□□□□□ -0.52
PTPN2-201ENST00000309660 RPL34P49207 117 aaKnown RBP11.82□□□□□ -0.52
PTPN2-201ENST00000309660 KPNB1Q14974 876 aaKnown RBP11.82□□□□□ -0.52
PTPN2-201ENST00000309660 TAF11Q15544 211 aa11.82□□□□□ -0.52
PTPN2-201ENST00000309660 TAC4Q86UU9 113 aa11.82□□□□□ -0.52
PTPN2-201ENST00000309660 TREML1Q86YW5 311 aa11.82□□□□□ -0.52
PTPN2-201ENST00000309660 PSTKQ8IV42 348 aaKnown RBP11.82□□□□□ -0.52
PTPN2-201ENST00000309660 WDR75Q8IWA0 830 aaKnown RBP11.82□□□□□ -0.52
PTPN2-201ENST00000309660 SPATA22Q8NHS9 363 aa11.82□□□□□ -0.52
PTPN2-201ENST00000309660 KCTD13Q8WZ19 329 aa11.82□□□□□ -0.52
PTPN2-201ENST00000309660 SMARCD1Q96GM5 515 aa11.82□□□□□ -0.52
PTPN2-201ENST00000309660 SLC2A13Q96QE2 648 aa11.82□□□□□ -0.52
PTPN2-201ENST00000309660 RNPEPL1Q9HAU8 725 aa11.82□□□□□ -0.52
PTPN2-201ENST00000309660 CNGB3Q9NQW8 809 aa11.82□□□□□ -0.52
PTPN2-201ENST00000309660 SIRPGQ9P1W8 387 aa11.82□□□□□ -0.52
PTPN2-201ENST00000309660 FBXW11Q9UKB1 542 aa11.82□□□□□ -0.52
PTPN2-201ENST00000309660 HBS1LQ9Y450 684 aaKnown RBP11.82□□□□□ -0.52
PTPN2-201ENST00000309660 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.82□□□□□ -0.52
PTPN2-201ENST00000309660 FBXO21O94952 628 aa11.82□□□□□ -0.52
PTPN2-201ENST00000309660 TGDSO95455 350 aa11.82□□□□□ -0.52
PTPN2-201ENST00000309660 CHRNA1P02708 482 aa11.82□□□□□ -0.52
PTPN2-201ENST00000309660 CALB2P22676 271 aa11.82□□□□□ -0.52
PTPN2-201ENST00000309660 PCSK1P29120 753 aa11.82□□□□□ -0.52
PTPN2-201ENST00000309660 OCRLQ01968 901 aa11.82□□□□□ -0.52
PTPN2-201ENST00000309660 KHDC1Q4VXA5 237 aaKnown RBP11.82□□□□□ -0.52
PTPN2-201ENST00000309660 VWA5B1Q5TIE3 1220 aa11.82□□□□□ -0.52
PTPN2-201ENST00000309660 ZNF354CQ86Y25 554 aa11.82□□□□□ -0.52
PTPN2-201ENST00000309660 DCLK2Q8N568 766 aa11.82□□□□□ -0.52
PTPN2-201ENST00000309660 POU5F2Q8N7G0 328 aa11.82□□□□□ -0.52
PTPN2-201ENST00000309660 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.82□□□□□ -0.52
PTPN2-201ENST00000309660 CLPTM1LQ96KA5 538 aa11.82□□□□□ -0.52
PTPN2-201ENST00000309660 IARS2Q9NSE4 1012 aaKnown RBP11.82□□□□□ -0.52
PTPN2-201ENST00000309660 SFMBT1Q9UHJ3 866 aa11.82□□□□□ -0.52
PTPN2-201ENST00000309660 ZSWIM8A7E2V4 1837 aa11.82□□□□□ -0.52
PTPN2-201ENST00000309660 PRR5-ARHGAP8B1AHC4 643 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 GSC2O15499 205 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 GLRA3O75311 464 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 MLNP12872 115 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 PGM1P36871 562 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 GP5P40197 560 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 CCNFP41002 786 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 GARSP41250 739 aaKnown RBP11.81□□□□□ -0.52
PTPN2-201ENST00000309660 SLC1A6P48664 564 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 FKBP1BP68106 108 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 ARHGAP8P85298 464 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 PAFAH1B3Q15102 231 aaKnown RBP11.81□□□□□ -0.52
PTPN2-201ENST00000309660 SDHAF4Q5VUM1 108 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 ARHGAP36Q6ZRI8 547 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 MARK2Q7KZI7 788 aaKnown RBP11.81□□□□□ -0.52
PTPN2-201ENST00000309660 METTL23Q86XA0 190 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 TEX9Q8N6V9 391 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 IPMKQ8NFU5 416 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 PPP4R1Q8TF05 950 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 STMN2Q93045 179 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 NT5C3BQ969T7 300 aa11.81□□□□□ -0.52
PTPN2-201ENST00000309660 ZNF778Q96MU6 729 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms