RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 SLC24A2Q9UI40 661 aa14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 CLUHO75153 1309 aa14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 JCHAINP01591 159 aa14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 BRAFP15056 766 aa14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 CHN1P15882 459 aa14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 PTPN3P26045 913 aa14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 STX2P32856 288 aa14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 EMC10Q5UCC4 262 aa14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 EXOC3L1Q86VI1 746 aa14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 ANKRD42Q8N9B4 389 aa14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 ZNF461Q8TAF7 563 aa14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 MGARPQ8TDB4 240 aa14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 USP33Q8TEY7 942 aa14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 BTN2A3PQ96KV6 586 aa14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 VAT1Q99536 393 aa14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 IL37Q9NZH6 218 aa14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 TRHDEQ9UKU6 1024 aa14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 PCDHB12Q9Y5F1 795 aa14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 PATJQ8NI35 1801 aa14.89□□□□□ -0.03
SHCBP1-201ENST00000303383 INHBAP08476 426 aa14.88□□□□□ -0.03
SHCBP1-201ENST00000303383 CSH1P0DML2 217 aa14.88□□□□□ -0.03
SHCBP1-201ENST00000303383 CSH2P0DML3 217 aa14.88□□□□□ -0.03
SHCBP1-201ENST00000303383 HSPA8P11142 646 aaKnown RBP14.88□□□□□ -0.03
SHCBP1-201ENST00000303383 KPNA1P52294 538 aaPredicted RBP14.88□□□□□ -0.03
SHCBP1-201ENST00000303383 MLLT6P55198 1093 aaPredicted RBP14.88□□□□□ -0.03
SHCBP1-201ENST00000303383 SESN2P58004 480 aaPredicted RBP14.88□□□□□ -0.03
SHCBP1-201ENST00000303383 WASHC5Q12768 1159 aa14.88□□□□□ -0.03
SHCBP1-201ENST00000303383 CMTR2Q8IYT2 770 aaKnown RBP14.88□□□□□ -0.03
SHCBP1-201ENST00000303383 SLC39A11Q8N1S5 342 aa14.88□□□□□ -0.03
SHCBP1-201ENST00000303383 PDZD8Q8NEN9 1154 aa14.88□□□□□ -0.03
SHCBP1-201ENST00000303383 UBE2OQ9C0C9 1292 aaKnown RBP14.88□□□□□ -0.03
SHCBP1-201ENST00000303383 CCSER2Q9H7U1 834 aa14.88□□□□□ -0.03
SHCBP1-201ENST00000303383 NKIRAS1Q9NYS0 192 aa14.88□□□□□ -0.03
SHCBP1-201ENST00000303383 ATF6P18850 670 aa14.88□□□□□ -0.03
SHCBP1-201ENST00000303383 MAGEA6P43360 314 aa14.88□□□□□ -0.03
SHCBP1-201ENST00000303383 CHSY1Q86X52 802 aa14.88□□□□□ -0.03
SHCBP1-201ENST00000303383 DNAAF3Q8N9W5 541 aa14.88□□□□□ -0.03
SHCBP1-201ENST00000303383 XPO6Q96QU8 1125 aaKnown RBP14.88□□□□□ -0.03
SHCBP1-201ENST00000303383 ACSS3Q9H6R3 686 aa14.88□□□□□ -0.03
SHCBP1-201ENST00000303383 LGALS13Q9UHV8 139 aa14.88□□□□□ -0.03
SHCBP1-201ENST00000303383 TEX264Q9Y6I9 313 aa14.88□□□□□ -0.03
SHCBP1-201ENST00000303383 FAM92AA1XBS5 289 aa14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 ARHGAP42A6NI28 874 aa14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 NDUFAB1O14561 156 aa14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 ITGB8P26012 769 aa14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 PPM1AP35813 382 aa14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 ATP5C1P36542 298 aaKnown RBP14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 MMP13P45452 471 aa14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 TPGS2Q68CL5 300 aa14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 TFAP2DQ7Z6R9 452 aa14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 CAND1Q86VP6 1230 aaKnown RBP14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 PAFAH2Q99487 392 aa14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 CLSTN3Q9BQT9 956 aa14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 MRPL17Q9NRX2 175 aaKnown RBP14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 TRPM5Q9NZQ8 1165 aa14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 SAMD15Q9P1V8 674 aa14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 RABGEF1Q9UJ41 708 aa14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 ZMYND8Q9ULU4 1186 aaPredicted RBP14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 KIAA0355O15063 1070 aa14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 VNN2O95498 520 aa14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 EIF4EBP2Q13542 120 aaPredicted RBP14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 ZSCAN26Q16670 478 aa14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 RAP1GAP2Q684P5 730 aa14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 RPRD1AQ96P16 312 aaPredicted RBP14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 SMC6Q96SB8 1091 aa14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 IGSF9Q9P2J2 1179 aa14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 DNMT3LQ9UJW3 386 aa14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 DSG1Q02413 1049 aa14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 TEX44Q53QW1 395 aa14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 NUGGCQ68CJ6 796 aa14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 C14orf80Q86SX3 495 aa14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 IGDCC3Q8IVU1 814 aa14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 RTL3Q8N8U3 475 aaKnown RBP14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 SLC39A13Q96H72 371 aa14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 C1orf74Q96LT6 269 aa14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 VN1R3Q9BXE9 311 aa14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 ZYG11BQ9C0D3 744 aa14.87□□□□□ -0.03
SHCBP1-201ENST00000303383 ZBTB24O43167 697 aaPredicted RBP14.86□□□□□ -0.03
SHCBP1-201ENST00000303383 PIAS1O75925 651 aa14.86□□□□□ -0.03
SHCBP1-201ENST00000303383 BAIAP3O94812 1187 aa14.86□□□□□ -0.03
SHCBP1-201ENST00000303383 SEPT7Q16181 437 aaKnown RBP14.86□□□□□ -0.03
SHCBP1-201ENST00000303383 PIK3R6Q5UE93 754 aa14.86□□□□□ -0.03
SHCBP1-201ENST00000303383 TDRPQ86YL5 185 aa14.86□□□□□ -0.03
SHCBP1-201ENST00000303383 CYP4X1Q8N118 509 aa14.86□□□□□ -0.03
SHCBP1-201ENST00000303383 AUTS2Q8WXX7 1259 aa14.86□□□□□ -0.03
SHCBP1-201ENST00000303383 ZNF689Q96CS4 500 aaPredicted RBP14.86□□□□□ -0.03
SHCBP1-201ENST00000303383 PIH1D1Q9NWS0 290 aaKnown RBP14.86□□□□□ -0.03
SHCBP1-201ENST00000303383 PCDH10Q9P2E7 1040 aa14.86□□□□□ -0.03
SHCBP1-201ENST00000303383 TCRBV9S1A1TA0A576 114 aa14.86□□□□□ -0.03
SHCBP1-201ENST00000303383 TMEM120BA0PK00 339 aa14.86□□□□□ -0.03
SHCBP1-201ENST00000303383 SDR42E2A6NKP2 422 aa14.86□□□□□ -0.03
SHCBP1-201ENST00000303383 GRIA1P42261 906 aa14.86□□□□□ -0.03
SHCBP1-201ENST00000303383 SPARCL1Q14515 664 aa14.86□□□□□ -0.03
SHCBP1-201ENST00000303383 EFTUD2Q15029 972 aaKnown RBP eCLIP14.86□□□□□ -0.038e-12■■■■□ 21.1
SHCBP1-201ENST00000303383 TIGD7Q6NT04 549 aaPredicted RBP14.86□□□□□ -0.03
SHCBP1-201ENST00000303383 PPM1NQ8N819 430 aa14.86□□□□□ -0.03
SHCBP1-201ENST00000303383 NSMCE1Q8WV22 266 aa14.86□□□□□ -0.03
SHCBP1-201ENST00000303383 STAMBPL1Q96FJ0 436 aa14.86□□□□□ -0.03
SHCBP1-201ENST00000303383 CEP295NLQ96MC4 621 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms