RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 PRKAG3Q9UGI9 489 aa9.77□□□□□ -0.84
RFX3-201ENST00000302303 EFR3BQ9Y2G0 817 aa9.77□□□□□ -0.84
RFX3-201ENST00000302303 TBC1D30Q9Y2I9 924 aa9.77□□□□□ -0.84
RFX3-201ENST00000302303 OR51B4Q9Y5P0 310 aa9.77□□□□□ -0.84
RFX3-201ENST00000302303 MYO10Q9HD67 2058 aa9.77□□□□□ -0.85
RFX3-201ENST00000302303 CTAGE9A4FU28 777 aa9.77□□□□□ -0.85
RFX3-201ENST00000302303 F5H5T6 163 aa9.77□□□□□ -0.85
RFX3-201ENST00000302303 PDE2AO00408 941 aaPredicted RBP9.77□□□□□ -0.85
RFX3-201ENST00000302303 EEF2KO00418 725 aaKnown RBP9.77□□□□□ -0.85
RFX3-201ENST00000302303 SLC9A3R1O14745 358 aaPredicted RBP9.77□□□□□ -0.85
RFX3-201ENST00000302303 HOXC11O43248 304 aaPredicted RBP9.77□□□□□ -0.85
RFX3-201ENST00000302303 TBL1XO60907 577 aa9.77□□□□□ -0.85
RFX3-201ENST00000302303 RHOQP17081 205 aa9.77□□□□□ -0.85
RFX3-201ENST00000302303 HTR7P34969 479 aa9.77□□□□□ -0.85
RFX3-201ENST00000302303 TPI1P60174 286 aa9.77□□□□□ -0.85
RFX3-201ENST00000302303 RUNX3Q13761 415 aa9.77□□□□□ -0.85
RFX3-201ENST00000302303 PAFAH1B3Q15102 231 aaKnown RBP9.77□□□□□ -0.85
RFX3-201ENST00000302303 PDGFRLQ15198 375 aa9.77□□□□□ -0.85
RFX3-201ENST00000302303 MPPE1Q53F39 396 aa9.77□□□□□ -0.85
RFX3-201ENST00000302303 TFDP3Q5H9I0 405 aa9.77□□□□□ -0.85
RFX3-201ENST00000302303 KIAA0907Q7Z7F0 614 aaPredicted RBP9.77□□□□□ -0.85
RFX3-201ENST00000302303 UBL4BQ8N7F7 174 aa9.77□□□□□ -0.85
RFX3-201ENST00000302303 RTL3Q8N8U3 475 aaKnown RBP9.77□□□□□ -0.85
RFX3-201ENST00000302303 BHMTQ93088 406 aa9.77□□□□□ -0.85
RFX3-201ENST00000302303 TBC1D31Q96DN5 1066 aa9.77□□□□□ -0.85
RFX3-201ENST00000302303 RPRD1AQ96P16 312 aaPredicted RBP9.77□□□□□ -0.85
RFX3-201ENST00000302303 EPAS1Q99814 870 aa9.77□□□□□ -0.85
RFX3-201ENST00000302303 OSBPL8Q9BZF1 889 aa9.77□□□□□ -0.85
RFX3-201ENST00000302303 LRRC19Q9H756 370 aa9.77□□□□□ -0.85
RFX3-201ENST00000302303 FBRSL1Q9HCM7 1045 aaKnown RBP9.77□□□□□ -0.85
RFX3-201ENST00000302303 TRPV5Q9NQA5 729 aa9.77□□□□□ -0.85
RFX3-201ENST00000302303 IGSF9Q9P2J2 1179 aa9.77□□□□□ -0.85
RFX3-201ENST00000302303 SAE1Q9UBE0 346 aaPredicted RBP9.77□□□□□ -0.85
RFX3-201ENST00000302303 INTS6Q9UL03 887 aaKnown RBP9.77□□□□□ -0.85
RFX3-201ENST00000302303 TTC7AQ9ULT0 858 aaPredicted RBP9.77□□□□□ -0.85
RFX3-201ENST00000302303 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.77□□□□□ -0.85
RFX3-201ENST00000302303 A0A0D9SEW6 157 aa9.76□□□□□ -0.85
RFX3-201ENST00000302303 A0A1B0GVM2 712 aa9.76□□□□□ -0.85
RFX3-201ENST00000302303 ANTXRLA6NF34 631 aa9.76□□□□□ -0.85
RFX3-201ENST00000302303 TCAF2A6NFQ2 919 aa9.76□□□□□ -0.85
RFX3-201ENST00000302303 H3BRJ5 948 aa9.76□□□□□ -0.85
RFX3-201ENST00000302303 CES2O00748 559 aa9.76□□□□□ -0.85
RFX3-201ENST00000302303 CACNG3O60359 315 aa9.76□□□□□ -0.85
RFX3-201ENST00000302303 CHRM1P11229 460 aaPredicted RBP9.76□□□□□ -0.85
RFX3-201ENST00000302303 TYRP14679 529 aa9.76□□□□□ -0.85
RFX3-201ENST00000302303 PECAM1P16284 738 aaPredicted RBP9.76□□□□□ -0.85
RFX3-201ENST00000302303 MSNP26038 577 aaKnown RBP9.76□□□□□ -0.85
RFX3-201ENST00000302303 CASQ1P31415 396 aa9.76□□□□□ -0.85
RFX3-201ENST00000302303 GJA4P35212 333 aa9.76□□□□□ -0.85
RFX3-201ENST00000302303 OPRD1P41143 372 aa9.76□□□□□ -0.85
RFX3-201ENST00000302303 SLC6A11P48066 632 aa9.76□□□□□ -0.85
RFX3-201ENST00000302303 IFNAR2P48551 515 aa9.76□□□□□ -0.85
RFX3-201ENST00000302303 ZNF135P52742 658 aaPredicted RBP9.76□□□□□ -0.85
RFX3-201ENST00000302303 CDH4P55283 916 aa9.76□□□□□ -0.85
RFX3-201ENST00000302303 GBE1Q04446 702 aa9.76□□□□□ -0.85
RFX3-201ENST00000302303 KRT81Q14533 505 aa9.76□□□□□ -0.85
RFX3-201ENST00000302303 TMEM215Q68D42 235 aa9.76□□□□□ -0.85
RFX3-201ENST00000302303 RWDD4Q6NW29 188 aaKnown RBP9.76□□□□□ -0.85
RFX3-201ENST00000302303 NPNTQ6UXI9 565 aa9.76□□□□□ -0.85
RFX3-201ENST00000302303 LRRC31Q6UY01 552 aa9.76□□□□□ -0.85
RFX3-201ENST00000302303 BBS12Q6ZW61 710 aa9.76□□□□□ -0.85
RFX3-201ENST00000302303 CHST9Q7L1S5 443 aa9.76□□□□□ -0.85
RFX3-201ENST00000302303 TFAP2DQ7Z6R9 452 aa9.76□□□□□ -0.85
RFX3-201ENST00000302303 SLC13A5Q86YT5 568 aaPredicted RBP9.76□□□□□ -0.85
RFX3-201ENST00000302303 MAP7D3Q8IWC1 876 aa9.76□□□□□ -0.85
RFX3-201ENST00000302303 SFTPA1Q8IWL2 248 aa9.76□□□□□ -0.85
RFX3-201ENST00000302303 UMODL1-AS1Q8N2C9 162 aa9.76□□□□□ -0.85
RFX3-201ENST00000302303 FIBINQ8TAL6 211 aa9.76□□□□□ -0.85
RFX3-201ENST00000302303 TTC8Q8TAM2 541 aa9.76□□□□□ -0.85
RFX3-201ENST00000302303 RBM41Q96IZ5 413 aaKnown RBP9.76□□□□□ -0.85
RFX3-201ENST00000302303 PBKQ96KB5 322 aa9.76□□□□□ -0.85
RFX3-201ENST00000302303 DDX50Q9BQ39 737 aaKnown RBP9.76□□□□□ -0.85
RFX3-201ENST00000302303 THG1LQ9NWX6 298 aaKnown RBP9.76□□□□□ -0.85
RFX3-201ENST00000302303 STIM2Q9P246 746 aa9.76□□□□□ -0.85
RFX3-201ENST00000302303 FAM50BQ9Y247 325 aa9.76□□□□□ -0.85
RFX3-201ENST00000302303 R3HDM2Q9Y2K5 976 aaKnown RBP9.76□□□□□ -0.85
RFX3-201ENST00000302303 CHD5Q8TDI0 1954 aa9.75□□□□□ -0.85
RFX3-201ENST00000302303 MFSD11O43934 449 aa9.75□□□□□ -0.85
RFX3-201ENST00000302303 CST8O60676 142 aa9.75□□□□□ -0.85
RFX3-201ENST00000302303 CLDN11O75508 207 aa9.75□□□□□ -0.85
RFX3-201ENST00000302303 LUC7L3O95232 432 aaKnown RBP9.75□□□□□ -0.85
RFX3-201ENST00000302303 MZF1P28698 734 aaPredicted RBP9.75□□□□□ -0.85
RFX3-201ENST00000302303 HLA-FP30511 346 aa9.75□□□□□ -0.85
RFX3-201ENST00000302303 ARL4AP40617 200 aa9.75□□□□□ -0.85
RFX3-201ENST00000302303 SOX9P48436 509 aa9.75□□□□□ -0.85
RFX3-201ENST00000302303 TDGQ13569 410 aa9.75□□□□□ -0.85
RFX3-201ENST00000302303 KAZNQ674X7 775 aa9.75□□□□□ -0.85
RFX3-201ENST00000302303 NAT16Q8N8M0 369 aa9.75□□□□□ -0.85
RFX3-201ENST00000302303 HJURPQ8NCD3 748 aaPredicted RBP9.75□□□□□ -0.85
RFX3-201ENST00000302303 ACTRT1Q8TDG2 376 aa9.75□□□□□ -0.85
RFX3-201ENST00000302303 DDI1Q8WTU0 396 aa9.75□□□□□ -0.85
RFX3-201ENST00000302303 EZH1Q92800 747 aaPredicted RBP9.75□□□□□ -0.85
RFX3-201ENST00000302303 ATP2A3Q93084 1043 aa9.75□□□□□ -0.85
RFX3-201ENST00000302303 BBS2Q9BXC9 721 aa9.75□□□□□ -0.85
RFX3-201ENST00000302303 SLC39A8Q9C0K1 460 aa9.75□□□□□ -0.85
RFX3-201ENST00000302303 RETREG1Q9H6L5 497 aa9.75□□□□□ -0.85
RFX3-201ENST00000302303 DTLQ9NZJ0 730 aa9.75□□□□□ -0.85
RFX3-201ENST00000302303 HCN2Q9UL51 889 aa9.75□□□□□ -0.85
RFX3-201ENST00000302303 SAR1BQ9Y6B6 198 aa9.75□□□□□ -0.85
RFX3-201ENST00000302303 TCF20Q9UGU0 1960 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms