RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 SOWAHBA6NEL2 793 aa14.37□□□□□ -0.11
SDC2-201ENST00000302190 SUPT7LO94864 414 aa14.37□□□□□ -0.11
SDC2-201ENST00000302190 SERPINE1P05121 402 aa14.37□□□□□ -0.11
SDC2-201ENST00000302190 LGALS2P05162 132 aa14.37□□□□□ -0.11
SDC2-201ENST00000302190 HOXC6P09630 235 aa14.37□□□□□ -0.11
SDC2-201ENST00000302190 USP17L7P0C7H9 530 aa14.37□□□□□ -0.11
SDC2-201ENST00000302190 TGFB3P10600 412 aa14.37□□□□□ -0.11
SDC2-201ENST00000302190 BCAT1P54687 386 aa14.37□□□□□ -0.11
SDC2-201ENST00000302190 ARMCX6Q7L4S7 300 aa14.37□□□□□ -0.11
SDC2-201ENST00000302190 CTU1Q7Z7A3 348 aaKnown RBP14.37□□□□□ -0.11
SDC2-201ENST00000302190 DCAKDQ8WVC6 231 aa14.37□□□□□ -0.11
SDC2-201ENST00000302190 ZNF560Q96MR9 790 aa14.37□□□□□ -0.11
SDC2-201ENST00000302190 SDCBP2Q9H190 292 aa14.37□□□□□ -0.11
SDC2-201ENST00000302190 NXF3Q9H4D5 531 aaKnown RBP14.37□□□□□ -0.11
SDC2-201ENST00000302190 DCDC2Q9UHG0 476 aa14.37□□□□□ -0.11
SDC2-201ENST00000302190 CHADO15335 359 aa14.37□□□□□ -0.11
SDC2-201ENST00000302190 PIGNO95427 931 aa14.37□□□□□ -0.11
SDC2-201ENST00000302190 FAM200BP0CF97 657 aa14.37□□□□□ -0.11
SDC2-201ENST00000302190 TAF6P49848 677 aa14.37□□□□□ -0.11
SDC2-201ENST00000302190 STILQ15468 1287 aa14.37□□□□□ -0.11
SDC2-201ENST00000302190 KLC3Q6P597 504 aa14.37□□□□□ -0.11
SDC2-201ENST00000302190 ERO1BQ86YB8 467 aa14.37□□□□□ -0.11
SDC2-201ENST00000302190 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.37□□□□□ -0.11
SDC2-201ENST00000302190 SNRNP27Q8WVK2 155 aaKnown RBP14.37□□□□□ -0.11
SDC2-201ENST00000302190 PLEKHG4BQ96PX9 1271 aa14.37□□□□□ -0.11
SDC2-201ENST00000302190 CYP3A43Q9HB55 503 aa14.37□□□□□ -0.11
SDC2-201ENST00000302190 GBA2Q9HCG7 927 aaPredicted RBP14.37□□□□□ -0.11
SDC2-201ENST00000302190 CCDC167Q9P0B6 97 aa14.37□□□□□ -0.11
SDC2-201ENST00000302190 ZNF232Q9UNY5 417 aa14.37□□□□□ -0.11
SDC2-201ENST00000302190 ITGA2BP08514 1039 aa14.37□□□□□ -0.11
SDC2-201ENST00000302190 GP5P40197 560 aa14.37□□□□□ -0.11
SDC2-201ENST00000302190 NEK3P51956 506 aa14.37□□□□□ -0.11
SDC2-201ENST00000302190 CTBP1Q13363 440 aa14.37□□□□□ -0.11
SDC2-201ENST00000302190 CELF3Q5SZQ8 465 aaKnown RBP14.37□□□□□ -0.11
SDC2-201ENST00000302190 CERCAMQ5T4B2 595 aa14.37□□□□□ -0.11
SDC2-201ENST00000302190 C1QTNF12Q5T7M4 302 aa14.37□□□□□ -0.11
SDC2-201ENST00000302190 TFAP2DQ7Z6R9 452 aa14.37□□□□□ -0.11
SDC2-201ENST00000302190 CCDC185Q8N715 623 aa14.37□□□□□ -0.11
SDC2-201ENST00000302190 FAM156AQ8NDB6 213 aa14.37□□□□□ -0.11
SDC2-201ENST00000302190 GABPB2Q8TAK5 448 aaPredicted RBP14.37□□□□□ -0.11
SDC2-201ENST00000302190 EMID1Q96A84 441 aaPredicted RBP14.37□□□□□ -0.11
SDC2-201ENST00000302190 P2RY11Q96G91 374 aa14.37□□□□□ -0.11
SDC2-201ENST00000302190 PEBP4Q96S96 227 aa14.37□□□□□ -0.11
SDC2-201ENST00000302190 UPF3AQ9H1J1 476 aaKnown RBP14.37□□□□□ -0.11
SDC2-201ENST00000302190 CILPO75339 1184 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 SEL1L3Q68CR1 1132 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 ITPRIPL1Q6GPH6 555 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 NOTUMQ6P988 496 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 METTL23Q86XA0 190 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 BHMTQ93088 406 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 MFSD3Q96ES6 412 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 ANKRD27Q96NW4 1050 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 LRRC40Q9H9A6 602 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 MID2Q9UJV3 735 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 SNX10Q9Y5X0 201 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 COL2A1P02458 1487 aaPredicted RBP14.36□□□□□ -0.11
SDC2-201ENST00000302190 CCL15-CCL14A0A0B4J2E2 113 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 ITM2AO43736 263 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 GFAPP14136 432 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 BST2Q10589 180 aaKnown RBP14.36□□□□□ -0.11
SDC2-201ENST00000302190 ACVR2BQ13705 512 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 GRIK4Q16099 956 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 CCL15Q16663 113 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 SLC10A6Q3KNW5 377 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 BTBD8Q5XKL5 378 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 B3GNT9Q6UX72 402 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 APLFQ8IW19 511 aaPredicted RBP14.36□□□□□ -0.11
SDC2-201ENST00000302190 ATPAF2Q8N5M1 289 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 SLC7A6OSQ96CW6 309 aaPredicted RBP14.36□□□□□ -0.11
SDC2-201ENST00000302190 HIC2Q96JB3 615 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 GPR20Q99678 358 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 DNAAF2Q9NVR5 837 aaKnown RBP14.36□□□□□ -0.11
SDC2-201ENST00000302190 GALNT8Q9NY28 637 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 CDYLQ9Y232 598 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 NFASCO94856 1347 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 DCAF8L1A6NGE4 600 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 BPGMP07738 259 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 LMO2P25791 158 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 LAMC2Q13753 1193 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 CCDC142Q17RM4 750 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 ANKRD20A4Q4UJ75 823 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 MIB1Q86YT6 1006 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 SYT15Q9BQS2 421 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 MRPL1Q9BYD6 325 aaKnown RBP14.36□□□□□ -0.11
SDC2-201ENST00000302190 ASB7Q9H672 318 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 ARHGEF38Q9NXL2 777 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.36□□□□□ -0.11
SDC2-201ENST00000302190 ABT1Q9ULW3 272 aaKnown RBP14.36□□□□□ -0.11
SDC2-201ENST00000302190 TNFSF13BQ9Y275 285 aa14.36□□□□□ -0.11
SDC2-201ENST00000302190 ZBBXA8MT70 800 aa14.35□□□□□ -0.11
SDC2-201ENST00000302190 TYROBPO43914 113 aa14.35□□□□□ -0.11
SDC2-201ENST00000302190 GRIK1P39086 918 aa14.35□□□□□ -0.11
SDC2-201ENST00000302190 GPD2P43304 727 aa14.35□□□□□ -0.11
SDC2-201ENST00000302190 NDUFV1P49821 464 aa14.35□□□□□ -0.11
SDC2-201ENST00000302190 PDAP1Q13442 181 aaKnown RBP14.35□□□□□ -0.11
SDC2-201ENST00000302190 ANO7Q6IWH7 933 aa14.35□□□□□ -0.11
SDC2-201ENST00000302190 FBXO27Q8NI29 283 aa14.35□□□□□ -0.11
SDC2-201ENST00000302190 PRPF18Q99633 342 aaKnown RBP14.35□□□□□ -0.11
SDC2-201ENST00000302190 EFHD1Q9BUP0 239 aa14.35□□□□□ -0.11
SDC2-201ENST00000302190 FRMD8P1Q9BZ68 369 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms