RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 RPL10AP62906 217 aaKnown RBP11.51□□□□□ -0.57
GCN1-201ENST00000300648 SMCO1Q147U7 214 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 TYSND1Q2T9J0 566 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 DHDDSQ86SQ9 333 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 WDR49Q8IV35 697 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 TSR3Q9UJK0 312 aaKnown RBP11.51□□□□□ -0.57
GCN1-201ENST00000300648 ITGA11Q9UKX5 1188 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 TBC1D30Q9Y2I9 924 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 KPNA5O15131 536 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 ZNF844Q08AG5 666 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 A1CFQ9NQ94 594 aaKnown RBP11.51□□□□□ -0.57
GCN1-201ENST00000300648 HPS4Q9NQG7 708 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 NAALADL1Q9UQQ1 740 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 PCDHA3Q9Y5H8 950 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 CNTNAP5Q8WYK1 1306 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 PTPN3P26045 913 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 GJA8P48165 433 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 LRRC71Q8N4P6 559 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 PJA1Q8NG27 643 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 RNASE11Q8TAA1 199 aaKnown RBP11.51□□□□□ -0.57
GCN1-201ENST00000300648 CLK4Q9HAZ1 481 aaKnown RBP11.51□□□□□ -0.57
GCN1-201ENST00000300648 GJB4Q9NTQ9 266 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 PMPCBO75439 489 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 NFICP08651 508 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 STAG3L1P0CL83 205 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 TGFB3P10600 412 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 ZNF662Q6ZS27 426 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 SLC25A41Q8N5S1 370 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 KBTBD4Q9NVX7 518 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 DDIT4Q9NX09 232 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 TRIM10Q9UDY6 481 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 WBP11Q9Y2W2 641 aaKnown RBP11.51□□□□□ -0.57
GCN1-201ENST00000300648 A0A0X1KG70 313 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 CHADO15335 359 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 PPIBP23284 216 aaKnown RBP11.51□□□□□ -0.57
GCN1-201ENST00000300648 PRDX5P30044 214 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 GSTM5P46439 218 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 AP3S2P59780 193 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 C10orf120Q5SQS8 335 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 RIPOR1Q6ZS17 1223 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 KDELC2Q7Z4H8 507 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 UBE2Q1Q7Z7E8 422 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 RASSF5Q8WWW0 418 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 FIG4Q92562 907 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 COX4I2Q96KJ9 171 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 LRMDAQ9H2I8 198 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 KLHL1Q9NR64 748 aa11.51□□□□□ -0.57
GCN1-201ENST00000300648 OGTO15294 1046 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 SGTAO43765 313 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 NMT2O60551 498 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 CETPP11597 493 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 PDIA6Q15084 440 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 ALG11Q2TAA5 492 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 CDKAL1Q5VV42 579 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 STOX1Q6ZVD7 989 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 FNDC5Q8NAU1 212 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 IL22Q9GZX6 179 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 EURLQ9NYK6 297 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 CYP27B1O15528 508 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 CHP2O43745 196 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 AP1G2O75843 785 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 MYBP10242 640 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 ERVK-10P10266 1014 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 ERFP50548 548 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 MINDY2Q8NBR6 621 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 FBXO25Q8TCJ0 367 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 GORASP1Q9BQQ3 440 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 GDF3Q9NR23 364 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 MDM4O15151 490 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 DNAJA2O60884 412 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 TNFRSF21O75509 655 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 SERPINF2P08697 491 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 KCNJ1P48048 391 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 ZSWIM7Q19AV6 140 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 STX12Q86Y82 276 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 SLC44A2Q8IWA5 706 aaPredicted RBP11.5□□□□□ -0.57
GCN1-201ENST00000300648 FAM151AQ8WW52 585 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 NSUN4Q96CB9 384 aaKnown RBP11.5□□□□□ -0.57
GCN1-201ENST00000300648 DDX18Q9NVP1 670 aaKnown RBP11.5□□□□□ -0.57
GCN1-201ENST00000300648 PFDN2Q9UHV9 154 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 TMA7Q9Y2S6 64 aaKnown RBP11.5□□□□□ -0.57
GCN1-201ENST00000300648 DEPDC5O75140 1603 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 MLYCDO95822 493 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 ZNF7P17097 686 aaPredicted RBP11.5□□□□□ -0.57
GCN1-201ENST00000300648 LRPAP1P30533 357 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 GCLCP48506 637 aaPredicted RBP11.5□□□□□ -0.57
GCN1-201ENST00000300648 RPL14P50914 215 aaKnown RBP11.5□□□□□ -0.57
GCN1-201ENST00000300648 NT5DC1Q5TFE4 455 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 KCNMB4Q86W47 210 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.5□□□□□ -0.571e-7■■■■□ 26
GCN1-201ENST00000300648 SNIP1Q8TAD8 396 aaKnown RBP11.5□□□□□ -0.57
GCN1-201ENST00000300648 RNF145Q96MT1 663 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 CGRRF1Q99675 332 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 MCM8Q9UJA3 840 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 C2CD2Q9Y426 696 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 A0A087X0T9 212 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 FOXN1O15353 648 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 FAM228BP0C875 321 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 PDHBP11177 359 aa11.5□□□□□ -0.57
GCN1-201ENST00000300648 RGS7P49802 495 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms