RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 CDC42BPGQ6DT37 1551 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 A0A0G2JLW4 131 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 EME2A4GXA9 379 aaPredicted RBP15.13■□□□□ 0.01
SCN3B-201ENST00000299333 HAT1O14929 419 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 NPTXRO95502 500 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 MAGP20916 626 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 CD151P48509 253 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 MAD2L1Q13257 205 aaPredicted RBP15.13■□□□□ 0.01
SCN3B-201ENST00000299333 FRG1Q14331 258 aaKnown RBP15.13■□□□□ 0.01
SCN3B-201ENST00000299333 CCSAPQ6IQ19 270 aaPredicted RBP15.13■□□□□ 0.01
SCN3B-201ENST00000299333 TMEM132CQ8N3T6 1108 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 FAR1Q8WVX9 515 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 FUCA2Q9BTY2 467 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 ING3Q9NXR8 418 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 SLC9A8Q9Y2E8 581 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 CAMTA2O94983 1202 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 VBP1P61758 197 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 CES3Q6UWW8 571 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 BORCS5Q969J3 196 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 ITFG2Q969R8 447 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 FAM84BQ96KN1 310 aaPredicted RBP15.13■□□□□ 0.01
SCN3B-201ENST00000299333 DMTF1Q9Y222 760 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 SPACA6W5XKT8 324 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 CYP11B2P19099 503 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 NEK3P51956 506 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 MSLNQ13421 630 aaPredicted RBP15.13■□□□□ 0.01
SCN3B-201ENST00000299333 RNF43Q68DV7 783 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 C16orf46Q6P387 395 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 TXNDC11Q6PKC3 985 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 TMC7Q7Z402 723 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 KCNMB4Q86W47 210 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 FBXO39Q8N4B4 442 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 KBTBD8Q8NFY9 601 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 STOML2Q9UJZ1 356 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 PMF1-BGLAPU3KQ54 211 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 ROBO2Q9HCK4 1378 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 C21orf2O43822 256 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 ALDH1A2O94788 518 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 ALOX5P09917 674 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 RXRGP48443 463 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 IST1P53990 364 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 LIN54Q6MZP7 749 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 TIGD7Q6NT04 549 aaPredicted RBP15.13■□□□□ 0.01
SCN3B-201ENST00000299333 SFRP1Q8N474 314 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 OR6J1Q8NGC5 347 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 POP1Q99575 1024 aaKnown RBP15.13■□□□□ 0.01
SCN3B-201ENST00000299333 SCUBE2Q9NQ36 999 aa15.13■□□□□ 0.01
SCN3B-201ENST00000299333 MGAT1P26572 445 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 PLK1P53350 603 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 SWT1Q5T5J6 900 aaKnown RBP15.12■□□□□ 0.01
SCN3B-201ENST00000299333 FAM131BQ86XD5 332 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 ATP6V0D2Q8N8Y2 350 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 PROX1Q92786 737 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 USP42Q9H9J4 1324 aaKnown RBP15.12■□□□□ 0.01
SCN3B-201ENST00000299333 SLC37A4O43826 429 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 SHBGP04278 402 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 RARAP10276 462 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 ITGA3P26006 1051 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 ABL2P42684 1182 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 ARF3P61204 181 aaPredicted RBP15.12■□□□□ 0.01
SCN3B-201ENST00000299333 ARF1P84077 181 aaKnown RBP15.12■□□□□ 0.01
SCN3B-201ENST00000299333 TTC23Q5W5X9 447 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 ZCCHC8Q6NZY4 707 aaKnown RBP15.12■□□□□ 0.01
SCN3B-201ENST00000299333 ATG9AQ7Z3C6 839 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 OOSP2Q86WS3 158 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 HDAC2Q92769 488 aaKnown RBP15.12■□□□□ 0.01
SCN3B-201ENST00000299333 MYLPFQ96A32 169 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 L3MBTL3Q96JM7 780 aaPredicted RBP15.12■□□□□ 0.01
SCN3B-201ENST00000299333 MAP3K14Q99558 947 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 ADI1Q9BV57 179 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 N6AMT1Q9Y5N5 214 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 TTLL13PA6NNM8 815 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 ENDOD1O94919 500 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 ZBTB11O95625 1053 aaPredicted RBP15.12■□□□□ 0.01
SCN3B-201ENST00000299333 CDKAL1Q5VV42 579 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 RBM43Q6ZSC3 357 aaKnown RBP15.12■□□□□ 0.01
SCN3B-201ENST00000299333 ACOT1Q86TX2 421 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 NSUN4Q96CB9 384 aaKnown RBP15.12■□□□□ 0.01
SCN3B-201ENST00000299333 YME1L1Q96TA2 773 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 TLR10Q9BXR5 811 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 PNPLA3Q9NST1 481 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 ZMYM5Q9UJ78 669 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 GMPPBQ9Y5P6 360 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 AP4B1Q9Y6B7 739 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 NPR3P17342 541 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 ITGB6P18564 788 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 ACO1P21399 889 aaKnown RBP15.12■□□□□ 0.01
SCN3B-201ENST00000299333 IL18R1Q13478 541 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 CDH18Q13634 790 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 RNF220Q5VTB9 566 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 EGFLAMQ63HQ2 1017 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 CWF19L1Q69YN2 538 aaKnown RBP15.12■□□□□ 0.01
SCN3B-201ENST00000299333 EEF1AKMT1Q8WVE0 214 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 MTMR12Q9C0I1 747 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 ARMC7Q9H6L4 198 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 PFDN2Q9UHV9 154 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 TARBP1Q13395 1621 aaKnown RBP15.12■□□□□ 0.01
SCN3B-201ENST00000299333 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.12■□□□□ 0.01
SCN3B-201ENST00000299333 PIGNO95427 931 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 CYP2F1P24903 491 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms