RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 IFRD2Q12894 506 aaPredicted RBP13.96□□□□□ -0.17
BCCIP-202ENST00000299130 ITGA9Q13797 1035 aa13.96□□□□□ -0.17
BCCIP-202ENST00000299130 PAFAH1B3Q15102 231 aaKnown RBP13.96□□□□□ -0.17
BCCIP-202ENST00000299130 PDK1Q15118 436 aa13.96□□□□□ -0.17
BCCIP-202ENST00000299130 DLG2Q15700 870 aa13.96□□□□□ -0.17
BCCIP-202ENST00000299130 DPP9Q86TI2 863 aa13.96□□□□□ -0.17
BCCIP-202ENST00000299130 TTC1Q99614 292 aa13.96□□□□□ -0.17
BCCIP-202ENST00000299130 HNRNPABQ99729 332 aaKnown RBP13.96□□□□□ -0.17
BCCIP-202ENST00000299130 YIPF3Q9GZM5 350 aa13.96□□□□□ -0.17
BCCIP-202ENST00000299130 ZNF212Q9UDV6 495 aa13.96□□□□□ -0.17
BCCIP-202ENST00000299130 SNX10Q9Y5X0 201 aa13.96□□□□□ -0.17
BCCIP-202ENST00000299130 DYNC1LI2O43237 492 aaPredicted RBP13.96□□□□□ -0.18
BCCIP-202ENST00000299130 STK10O94804 968 aaKnown RBP13.96□□□□□ -0.18
BCCIP-202ENST00000299130 CD4P01730 458 aa13.96□□□□□ -0.18
BCCIP-202ENST00000299130 ERCC2P18074 760 aa13.96□□□□□ -0.18
BCCIP-202ENST00000299130 PTPN3P26045 913 aa13.96□□□□□ -0.18
BCCIP-202ENST00000299130 NOS2P35228 1153 aa13.96□□□□□ -0.18
BCCIP-202ENST00000299130 USP4Q13107 963 aa13.96□□□□□ -0.18
BCCIP-202ENST00000299130 DNAL1Q4LDG9 190 aa13.96□□□□□ -0.18
BCCIP-202ENST00000299130 C1orf146Q5VVC0 180 aa13.96□□□□□ -0.18
BCCIP-202ENST00000299130 WSCD1Q658N2 575 aa13.96□□□□□ -0.18
BCCIP-202ENST00000299130 NAPRTQ6XQN6 538 aa13.96□□□□□ -0.18
BCCIP-202ENST00000299130 CLEC20AQ6ZU45 233 aa13.96□□□□□ -0.18
BCCIP-202ENST00000299130 NPWQ8N729 165 aa13.96□□□□□ -0.18
BCCIP-202ENST00000299130 EFCAB3Q8N7B9 438 aa13.96□□□□□ -0.18
BCCIP-202ENST00000299130 NPLOC4Q8TAT6 608 aa13.96□□□□□ -0.18
BCCIP-202ENST00000299130 ZNF669Q96BR6 464 aaPredicted RBP13.96□□□□□ -0.18
BCCIP-202ENST00000299130 MAML3Q96JK9 1138 aa13.96□□□□□ -0.18
BCCIP-202ENST00000299130 APOL2Q9BQE5 337 aa13.96□□□□□ -0.18
BCCIP-202ENST00000299130 DLGAP2Q9P1A6 1054 aa13.96□□□□□ -0.18
BCCIP-202ENST00000299130 LRCH1Q9Y2L9 728 aa13.96□□□□□ -0.18
BCCIP-202ENST00000299130 HUS1O60921 280 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 CIB2O75838 187 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 ZMPSTE24O75844 475 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 POLBP06746 335 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 RALBP11234 206 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 PTPN1P18031 435 aaKnown RBP13.95□□□□□ -0.18
BCCIP-202ENST00000299130 GP5P40197 560 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 MAP3K7CLP57077 242 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 ABCE1P61221 599 aaKnown RBP13.95□□□□□ -0.18
BCCIP-202ENST00000299130 CCNA1P78396 465 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 MRPS35P82673 323 aaKnown RBP13.95□□□□□ -0.18
BCCIP-202ENST00000299130 SNX17Q15036 470 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 GPRIN1Q7Z2K8 1008 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 PHC3Q8NDX5 983 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 SLC7A14Q8TBB6 771 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 WNT8BQ93098 351 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 MFSD3Q96ES6 412 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 ZNF560Q96MR9 790 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 C1orf21Q9H246 121 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 TMEM30AQ9NV96 361 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 KLHL8Q9P2G9 620 aaPredicted RBP13.95□□□□□ -0.18
BCCIP-202ENST00000299130 IGSF9Q9P2J2 1179 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 SOX13Q9UN79 622 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 APOBEC2Q9Y235 224 aaKnown RBP13.95□□□□□ -0.18
BCCIP-202ENST00000299130 TSC2P49815 1807 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 NRCAMQ92823 1304 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 ZCWPW2A0A1B0GU75 182 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 BTBD19C9JJ37 291 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 ZBTB24O43167 697 aaPredicted RBP13.95□□□□□ -0.18
BCCIP-202ENST00000299130 MAP3K7O43318 606 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 BAG2O95816 211 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 NPR3P17342 541 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 SP100P23497 879 aaPredicted RBP13.95□□□□□ -0.18
BCCIP-202ENST00000299130 CD68P34810 354 aaPredicted RBP13.95□□□□□ -0.18
BCCIP-202ENST00000299130 PEX19P40855 299 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 TKTL1P51854 596 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 CACNA2D1P54289 1103 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 TBCCQ15814 346 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 TRMT5Q32P41 509 aaKnown RBP13.95□□□□□ -0.18
BCCIP-202ENST00000299130 CERCAMQ5T4B2 595 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 FSTL4Q6MZW2 842 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 IRGCQ6NXR0 463 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 RNF111Q6ZNA4 994 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 GPR142Q7Z601 462 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 STRA8Q7Z7C7 330 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 CCNJLQ8IV13 435 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 PHTF2Q8N3S3 785 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 SMG8Q8ND04 991 aaKnown RBP13.95□□□□□ -0.18
BCCIP-202ENST00000299130 ATP2A3Q93084 1043 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 SLC2A13Q96QE2 648 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 MLPHQ9BV36 600 aaPredicted RBP13.95□□□□□ -0.18
BCCIP-202ENST00000299130 MAN1C1Q9NR34 630 aa13.95□□□□□ -0.18
BCCIP-202ENST00000299130 CCDC78A2IDD5 438 aa13.94□□□□□ -0.18
BCCIP-202ENST00000299130 RRN3P2A6NIE6 340 aa13.94□□□□□ -0.18
BCCIP-202ENST00000299130 YJEFN3A6XGL0 299 aa13.94□□□□□ -0.18
BCCIP-202ENST00000299130 MEIS3P2A8K0S8 358 aa13.94□□□□□ -0.18
BCCIP-202ENST00000299130 PPP1R12AO14974 1030 aaPredicted RBP13.94□□□□□ -0.18
BCCIP-202ENST00000299130 TREHO43280 583 aa13.94□□□□□ -0.18
BCCIP-202ENST00000299130 PDE5AO76074 875 aa13.94□□□□□ -0.18
BCCIP-202ENST00000299130 CPA3P15088 417 aa13.94□□□□□ -0.18
BCCIP-202ENST00000299130 KCNE1P15382 129 aa13.94□□□□□ -0.18
BCCIP-202ENST00000299130 TPH1P17752 444 aa13.94□□□□□ -0.18
BCCIP-202ENST00000299130 ADRA1BP35368 520 aa13.94□□□□□ -0.18
BCCIP-202ENST00000299130 ZBTB17Q13105 803 aa13.94□□□□□ -0.18
BCCIP-202ENST00000299130 DBN1Q16643 649 aa13.94□□□□□ -0.18
BCCIP-202ENST00000299130 XKR4Q5GH76 650 aa13.94□□□□□ -0.18
BCCIP-202ENST00000299130 PSTKQ8IV42 348 aaKnown RBP13.94□□□□□ -0.18
BCCIP-202ENST00000299130 PPFIBP2Q8ND30 876 aa13.94□□□□□ -0.18
BCCIP-202ENST00000299130 OR6Y1Q8NGX8 325 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms