RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 FOPNLQ96NB1 174 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 HEATR9A2RTY3 570 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 ZSCAN5CA6NGD5 496 aaPredicted RBP12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 TRIM24O15164 1050 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 PRPF4O43172 522 aaKnown RBP eCLIP12.1□□□□□ -0.473e-9■■■■■ 30.9
SYNGAP1-201ENST00000293748 FAM153BP0C7A2 387 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 TNFRSF8P28908 595 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 EPHB2P29323 1055 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 MEA1Q16626 185 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 FAM153CQ494X1 144 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 FAXCQ5TGI0 409 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 B3GNT9Q6UX72 402 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 TMC5Q6UXY8 1006 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 UBE2Q1Q7Z7E8 422 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 NPAS4Q8IUM7 802 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 CROCCP3Q8IVE0 287 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 RAB42Q8N4Z0 105 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 GDPD5Q8WTR4 605 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 ETAA1Q9NY74 926 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 EIF3LQ9Y262 564 aaKnown RBP12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 PCDHB12Q9Y5F1 795 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 GRIN2DO15399 1336 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 MCM3APO60318 1980 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 TMEM150BA6NC51 233 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 FASP25445 335 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 SPIRE2Q8WWL2 714 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 OXNAD1Q96HP4 312 aaPredicted RBP12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 TBX20Q9UMR3 447 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 INSL6Q9Y581 213 aa12.1□□□□□ -0.47
SYNGAP1-201ENST00000293748 MAP3K13O43283 966 aa12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 AHCYL1O43865 530 aa12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 TARBP2Q15633 366 aaKnown RBP12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 AARS2Q5JTZ9 985 aaKnown RBP12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 FAM26DQ5JW98 314 aa12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 PTRHD1Q6GMV3 140 aaKnown RBP12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 SPOCD1Q6ZMY3 1216 aa12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 SPATA17Q96L03 361 aa12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 TCF7L2Q9NQB0 619 aa12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 KIAA1257Q9ULG3 409 aa12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 MYRFQ9Y2G1 1151 aa12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 SNTNA6NMZ2 147 aa12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 E9PBE3 544 aa12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 KLHL41O60662 606 aa12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 RHOBTB1O94844 696 aa12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 SERPINE1P05121 402 aa12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 RRM1P23921 792 aa12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 MNX1P50219 401 aaPredicted RBP12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 ADARP55265 1226 aaKnown RBP12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 SLC45A4Q5BKX6 768 aa12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 CACHD1Q5VU97 1274 aa12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 MRNIPQ6NTE8 343 aa12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 MREGQ8N565 214 aa12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 TMC2Q8TDI7 906 aa12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 HES6Q96HZ4 224 aa12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 SAMD11Q96NU1 681 aa12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 SESN1Q9Y6P5 492 aa12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 A0A087WXM4 84 aa12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 RBP1P09455 135 aa12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 TTKP33981 857 aa12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 GEMP55040 296 aa12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 XRCC4Q13426 336 aa12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 ATF7IP2Q5U623 682 aa12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 TBC1D19Q8N5T2 526 aa12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 OSCP1Q8WVF1 389 aa12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 ATAD3AQ9NVI7 634 aa12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 THAP1Q9NVV9 213 aa12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 UTP6Q9NYH9 597 aaKnown RBP12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 ACOT9Q9Y305 439 aa12.09□□□□□ -0.47
SYNGAP1-201ENST00000293748 GOLGB1Q14789 3259 aaKnown RBP12.08□□□□□ -0.47
SYNGAP1-201ENST00000293748 KRT87PA6NCN2 255 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 SNX3O60493 162 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 CNOT3O75175 753 aaKnown RBP12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 PRKAA2P54646 552 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 IFI35P80217 286 aaPredicted RBP12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 NFYCQ13952 458 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 DCAF6Q58WW2 860 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 CYP4A22Q5TCH4 519 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 TSEN2Q8NCE0 465 aaKnown RBP12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 GANCQ8TET4 914 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 SMCHD1A6NHR9 2005 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 DNALI1O14645 258 aaPredicted RBP12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 LSM8O95777 96 aaKnown RBP12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 IMPDH2P12268 514 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 ROR2Q01974 943 aaKnown RBP12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 PRKAA1Q13131 559 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 SLC27A1Q6PCB7 646 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 HERVK_113Q902F9 699 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 VPS33AQ96AX1 596 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 APOPT1Q96IL0 206 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 DAPK2Q9UIK4 370 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 RPL26L1Q9UNX3 145 aaKnown RBP12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 LRRC10BA6NIK2 292 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 TBKBP1A7MCY6 615 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 WNT7AO00755 349 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 ALADP13716 330 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 ATP4AP20648 1035 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 RPL21P46778 160 aaKnown RBP12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 CASP4P49662 377 aa12.08□□□□□ -0.48
SYNGAP1-201ENST00000293748 MGAT5Q09328 741 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms